Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_M03
(931 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 36 0.008
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.019
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.019
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 33 0.057
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.076
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 32 0.13
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.18
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.31
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.71
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 1.6
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 1.6
SPBC19C7.06 |||proline-tRNA ligase |Schizosaccharomyces pombe|ch... 23 4.9
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 35.9 bits (79), Expect = 0.008
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = -1
Query: 910 GPGXXXGGXARGXGGGGXXXXGXXGXXXGXXGGRGGAXGG 791
G G GG GG G G G G GGRGGA GG
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = -1
Query: 910 GPGXXXGGXARGXGGGGXXXXGXXGXXXGXXGGRGGAXGG 791
G G GG GGG G G G GGRGG+ GG
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 35.9 bits (79), Expect = 0.008
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = -1
Query: 910 GPGXXXGGXARGXGGGGXXXXGXXGXXXGXXGGRGGAXGG 791
G G GG G GG G G G GGRGGA GG
Sbjct: 31 GRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -1
Query: 889 GXARGXGGGGXXXXGXXGXXXGXXGGRGGAXGGXXXXXXXGGWG 758
G G GG G G G GGRGGA GG G G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGG 49
Score = 31.1 bits (67), Expect = 0.23
Identities = 22/49 (44%), Positives = 22/49 (44%)
Frame = -2
Query: 891 GXXRGGRXGGEXXGXGXXGXGXGXXGGGGXRXGXRXXPXXXGXGXEXGR 745
G RGGR GG G G G G G GGG R G R G G GR
Sbjct: 12 GGSRGGR-GGFNGGRGGFGGGRGGARGGG-RGGARGGRGGRG-GARGGR 57
Score = 30.7 bits (66), Expect = 0.31
Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -1
Query: 907 PGXXXG-GXARGXGGGGXXXXGXXGXXXGXX--GGRGGAXGG 791
PG G G +RG GG G G G GGRGGA GG
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGG 46
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.019
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 799 PXPPAPRXTXPXPPPPXXXPLPPXPXPAPXPXXP 900
P PP P + P PPP P+P P AP P P
Sbjct: 1705 PTPPPPPMSVP--PPPSAPPMPAGPPSAPPPPLP 1736
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 806 PPPPXXPXPXPXXPXPXXSPPXRPPRXXPXXRAGXXXXPXXR 931
PPPP P P P PP PP P A P R
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPGDR 1749
Score = 29.9 bits (64), Expect = 0.53
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 814 PRXTXPXPPPPXXXPLPPXPXPAPXPXXPXRXXXXP 921
P+ + P PPPP +PP P P P P P
Sbjct: 1700 PQMSAPTPPPPP-MSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/39 (33%), Positives = 13/39 (33%), Gaps = 1/39 (2%)
Frame = +1
Query: 766 PXXPRXXXXPXPXPPAPRXTXPXPPPP-XXXPLPPXPXP 879
P P P PP P PPPP P P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.7 bits (76), Expect = 0.019
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = -1
Query: 910 GPGXXXGGXARGXGGGGXXXXGXXGXXXGXXGGRGGAXGG 791
GPG GG G GGG G G G GG GG GG
Sbjct: 229 GPGGFEGGPG-GFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Score = 33.5 bits (73), Expect = 0.043
Identities = 21/54 (38%), Positives = 22/54 (40%)
Frame = -1
Query: 919 GXXGPGXXXGGXARGXGGGGXXXXGXXGXXXGXXGGRGGAXGGXXXXXXXGGWG 758
G G G GG G GGG G G G GG GG GG GG+G
Sbjct: 212 GFGGEGHHHGGHG-GFGGGPGGFEGGPGGFGGGPGGFGGGLGG--FGGGPGGFG 262
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = -3
Query: 899 GXXGXGAGXGXGGXGXXXGGGGXGXVXRGAGGXGXGXXXXRGXXGXGXNXG 747
G G G G G G GGG G G GG G G G G G
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 30.7 bits (66), Expect = 0.31
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -1
Query: 910 GPGXXXGGXARGXGGGGXXXXGXXGXXXGXXGGRGG 803
GPG GG G GGG G G G GG GG
Sbjct: 236 GPGGFGGGPG-GFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = -1
Query: 919 GXXGPGXXXGGXARGXGGGGXXXXGXXGXXXGXXGGRGGAXG-GXXXXXXXGGWG 758
G PG G G GG G G G G G GG G G GG G
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLG 252
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 33.1 bits (72), Expect = 0.057
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 766 PXXPRXXXXPXPXPPAPRXTXPXPPPPXXXPLPPXPXPAPXP 891
P P P P P P P PP P+P P P P
Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPP 140
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Frame = +1
Query: 793 PXPX-PPAPRXTXPXPPPPXXXPLPPXPXP 879
P P PP P P P P PLP P P
Sbjct: 118 PLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/33 (33%), Positives = 12/33 (36%)
Frame = +1
Query: 766 PXXPRXXXXPXPXPPAPRXTXPXPPPPXXXPLP 864
P P P P P P P PP P+P
Sbjct: 115 PEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.7 bits (71), Expect = 0.076
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +1
Query: 775 PRXXXXPXPXPPAPRXTXPXPPPPXXXPLPPXPXPAPXP 891
P P P PPAP P PPPP P P P P
Sbjct: 744 PAPAPIPVP-PPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.9 bits (64), Expect = 0.53
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = +1
Query: 793 PXPXPPAPRXTXPXPPP-PXXXPLPPXPXPAPXPXXP 900
P P PPA P P P P P P P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 793 PXPXPPAPRXTXPXPPPPXXXPLPP 867
P P PP P PPPP P PP
Sbjct: 761 PPPPPPPPGVAGAGPPPP--PPPPP 783
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -1
Query: 919 GXXGPGXXXGGXARGXGGGGXXXXGXXGXXXGXXGG-RGGAXGG 791
G G GG +RG GGG G G GG RGG+ GG
Sbjct: 146 GRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Score = 31.1 bits (67), Expect = 0.23
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Frame = -1
Query: 919 GXXGPGXXXGGXARGXGG-GGXXXXGXXGXXXGXXGG--RGGAXGG 791
G G G GG GG GG G G G GG RGG+ GG
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.5 bits (68), Expect = 0.18
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +1
Query: 766 PXXPRXXXXPXPXPPAPRXTXPXPPPPXXXPLPPXPXPAPXPXXPXR 906
P P+ P P PP + PPP PAP P P R
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Score = 29.9 bits (64), Expect = 0.53
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 6/51 (11%)
Frame = +1
Query: 766 PXXPRXXXXPXPXPPAPRXTXPXPP-PPXXXPLP-----PXPXPAPXPXXP 900
P P P PP+ P P P PLP P P PAP P P
Sbjct: 437 PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 29.5 bits (63), Expect = 0.71
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 793 PXPXPPAPRXTXPXPPPPXXXPLPPXPXPAPXP 891
P P PP P PP PP P P P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 29.1 bits (62), Expect = 0.93
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +1
Query: 778 RXXXXPXPXPPAPRXTXPXPPPPXXXPLPPXPXPAPXPXXPXRXXXXP 921
R P P PP+ + P PP P P PA P P P
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.7 bits (66), Expect = 0.31
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +1
Query: 805 PPAPRXTXPXPPPPXXXPLPPXPXPAPXPXXPXRXXXXP 921
PP P + PP P PP P P P P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAP 1060
Score = 30.3 bits (65), Expect = 0.40
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +1
Query: 793 PXPXPPAPRXTXPXPPPPXXXPLPPXPXP-APXPXXP 900
P PP P+ + PP P PP P P A P P
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 29.5 bits (63), Expect = 0.71
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 799 PXPPAPRXTXPXPPPPXXXPLPPXPXPAPXPXXP 900
P P P T P P P P P PAP P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIP 1074
Score = 29.5 bits (63), Expect = 0.71
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 793 PXPXPPAPRXTXPXPPPPXXXPLPPXPXPA 882
P PP P+ + PP P PP P P+
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPS 1146
Score = 29.5 bits (63), Expect = 0.71
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 793 PXPXPPAPRXTXPXPPPPXXXPLPPXPXPA 882
P PP P+ + PP P PP P P+
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPS 1165
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +1
Query: 793 PXPXPPAPRXTXPXPPPPXXXPLPPXPXPAPXPXXP 900
P PP P + P P PP P P+ P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVP 1095
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 766 PXXPRXXXXPXPXPPAPRXTXPXPPPPXXXPLPPXPXPAPXPXXP 900
P P+ P PP P P P P P P P AP P
Sbjct: 1179 PPVPKPAAGVPPVPP-PSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 805 PPAPRXTXPXPPPPXXXPLPPXPXPA 882
PP P+ + PP P PP P P+
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPS 1127
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 793 PXPXPPAPRXTXPXPPPPXXXPLPPXPXPAPXP 891
P PP P T P P P P P P P
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 799 PXPPAPRXTXPXPPPPXXXPLPPXPXPAPXPXXP 900
P PAP P P P P P P AP P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
Frame = +1
Query: 793 PXPXPPAPRXTX--PXPPPPXXXP---LPPXPXPAPXPXXP 900
P PP P+ + P PPP P +P P P+ P P
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +1
Query: 805 PPAPRXTXPXPPPPXXXPLPPXPXPAPXPXXP 900
PP P + P P PP P P+ P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +1
Query: 799 PXPPAPRXTXPXPPPPXXXPLPPXPXPAPXPXXP 900
P PAP P P P P+P AP P
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
Score = 26.6 bits (56), Expect = 5.0
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +1
Query: 766 PXXPRXXXXPXPXPPAPRXTXPXPPPPXXXPLPPXPXP-APXPXXP 900
P P+ P PP P P P P LPP P P A P P
Sbjct: 1198 PPVPKPSVGVPPVPP-PSTAPPVPTPSAG--LPPVPVPTAKAPPVP 1240
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 799 PXPPAPRXTXPXPPPPXXXPLPPXPXPAPXPXXP 900
P P P P P P P P P AP P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/45 (28%), Positives = 14/45 (31%)
Frame = +1
Query: 766 PXXPRXXXXPXPXPPAPRXTXPXPPPPXXXPLPPXPXPAPXPXXP 900
P P+ P P P P P P P P AP P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/52 (28%), Positives = 17/52 (32%), Gaps = 7/52 (13%)
Frame = +1
Query: 766 PXXPRXXXXPXPXPPAPRXTXPXPPPPXXXP-------LPPXPXPAPXPXXP 900
P P P P P PPP P +PP P P+ P P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +2
Query: 746 LPYSXPXPXXXGXXRXPXRXPPPPXXPXPXPXXPXPXXSPPXRPPRXXP 892
LP P G R PP P P P SP PP+ P
Sbjct: 944 LPTKLTRPSNDGRKASGPRPAAPPSIPPPLPVSNI-LSSPTSEPPKDHP 991
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.71
Identities = 15/52 (28%), Positives = 18/52 (34%)
Frame = +1
Query: 766 PXXPRXXXXPXPXPPAPRXTXPXPPPPXXXPLPPXPXPAPXPXXPXRXXXXP 921
P P+ P P PR + P P P P+P P P P P
Sbjct: 130 PPTPQSELRPPTSAP-PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 29.1 bits (62), Expect = 0.93
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = +1
Query: 799 PXPPAPRXTXPXPPPPXXXPLPPXPXPAPXPXXPXRXXXXP 921
P PP P+ P P P P PA P P + P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/60 (28%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Frame = +2
Query: 749 PYSXPXPXXXGXXRXPXRXPPPPXXPXPXP--XXPXPXXSPPXRPPRXXPXXRAGXXXXP 922
P + P R P PP P P P P P P +PP P A P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 829 PXPPPPXXXPLPPXPXPAP 885
P PPPP P P PAP
Sbjct: 3 PAPPPPPPAPAPAAAAPAP 21
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +1
Query: 793 PXPXPPAPRXTXPXPP--PPXXXPLPPXPXPAPXPXXPXRXXXXP 921
P PP+P P P PP LPP PA P P
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLP 191
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +2
Query: 755 SXPXPXXXGXXRXPXRXPPPPXXPXPXPXXPXPXXSPPXRP 877
S P P P + PP P P P SPP P
Sbjct: 148 SIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/33 (33%), Positives = 12/33 (36%)
Frame = +1
Query: 793 PXPXPPAPRXTXPXPPPPXXXPLPPXPXPAPXP 891
P P PA P P +PP P P P
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 814 PRXTXPXPPPPXXXPLPPXPXPAPXP 891
P P PPPP P P P P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 846 PXXXXPPPPXPRAXPPXXXPGPXXP 920
P PPPP P PP P P P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 793 PXPXPPAPRXTXPXPPPPXXXP 858
P P PP P P PPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 846 PXXXXPPPPXPRAXPPXXXPGPXXP 920
P PPPP P P P P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 794 PXRXPPPPXXPXPXPXXPXPXXSPPXRPP 880
P PPPP P P P PP PP
Sbjct: 6 PGNPPPPP----PPPGFEPPSQPPPPPPP 30
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = +1
Query: 775 PRXXXXPXPXPPAPRXTXPXPPPPXXXPLPPXPXPAP 885
P+ P P P PPPP + P PAP
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPBC19C7.06 |||proline-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 716
Score = 23.0 bits (47), Expect(2) = 4.9
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -2
Query: 171 IAPWARAMQAKRTTNLAAMMYCRETEC 91
+ WA + A N+ + +C TEC
Sbjct: 623 VKEWADFVPALNKKNIVMIPWCNTTEC 649
Score = 21.8 bits (44), Expect(2) = 4.9
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2
Query: 75 PDCNTEECVKKI 40
P CNT EC K+I
Sbjct: 642 PWCNTTECEKEI 653
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,387,522
Number of Sequences: 5004
Number of extensions: 37594
Number of successful extensions: 452
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 285
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 471335896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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