Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_L22
         (1069 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0022 + 17256475-17256480,17256521-17256871                       37   0.031

>01_05_0022 + 17256475-17256480,17256521-17256871
          Length = 118

 Score = 36.7 bits (81), Expect = 0.031
 Identities = 19/41 (46%), Positives = 20/41 (48%)
 Frame = -1

Query: 1069 GXXGXXGGGXRRRGXRWXEREXRXXGXRGXXXGREXXRGRE 947
            G  G  GGG RR G RW  RE      RG   G E  RGR+
Sbjct: 69   GGGGGDGGGARRCGRRWQRREAE-AAARGESGGGERGRGRD 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,132,750
Number of Sequences: 37544
Number of extensions: 173996
Number of successful extensions: 462
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3176197312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)