Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_L19
         (883 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69302-5|CAA93262.1|  189|Caenorhabditis elegans Hypothetical pr...   122   3e-28
Z84574-8|CAE54891.1|  921|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z84574-7|CAB06544.3|  928|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AL022593-4|CAE54889.1|  921|Caenorhabditis elegans Hypothetical ...    28   7.7  
AL022593-3|CAA18635.3|  928|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z69302-5|CAA93262.1|  189|Caenorhabditis elegans Hypothetical
           protein F40F8.10 protein.
          Length = 189

 Score =  122 bits (294), Expect = 3e-28
 Identities = 58/73 (79%), Positives = 64/73 (87%)
 Frame = +1

Query: 151 SVFSKXYVXPRRPFEKARLDQXLKXIGXYGLRNKREVWRVKYTLARIRKAARELLTLEEK 330
           +V SK    PRRPFEK RLDQ LK IG +GL+NKREVWRVKYTLA++RKAARELLTLE+K
Sbjct: 6   TVQSKVTKSPRRPFEKERLDQELKLIGTFGLKNKREVWRVKYTLAKVRKAARELLTLEDK 65

Query: 331 DPKRLFEGNALLR 369
           DPKRLFEGNALLR
Sbjct: 66  DPKRLFEGNALLR 78



 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 49/74 (66%), Positives = 52/74 (70%)
 Frame = +2

Query: 371 RLVRIGVLDEKXMKLDYVLGLKIEXFLERRLXTQVFKAGLAKSXXXXXXXXXXXXXXVRX 550
           RLV+IGVLDE  MKLDYVLGLK+E FLERRL TQVFK GLAKS              VR 
Sbjct: 79  RLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILIKQHHIRVRR 138

Query: 551 XVVXIPSFIVRLDS 592
            VV +PSFIVRLDS
Sbjct: 139 QVVDVPSFIVRLDS 152



 Score = 38.3 bits (85), Expect = 0.007
 Identities = 17/30 (56%), Positives = 18/30 (60%)
 Frame = +3

Query: 600 HXXFSLXSPFXGGRPXRVXRXXLRXGQXGG 689
           H  FSL SP+ GGRP RV R  LR G   G
Sbjct: 155 HIDFSLQSPYGGGRPGRVKRRTLRKGDGAG 184


>Z84574-8|CAE54891.1|  921|Caenorhabditis elegans Hypothetical
           protein F33E2.2b protein.
          Length = 921

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +1

Query: 298 AARELLTLEEKDPKRLFEGNALLRSSGSYWST--G*KTDETRLCAWSED*GLLGASSADA 471
           A ++    E  +P ++   +A+ R SGSYW T  G +    R   +S+D G+  A +   
Sbjct: 553 AGQQTRRSEGANPPKILRNDAI-RHSGSYWETLGGARGSPARDSGFSQDSGMWSAGAGSC 611

Query: 472 GVQSWXGE 495
              +  G+
Sbjct: 612 TAINGGGQ 619


>Z84574-7|CAB06544.3|  928|Caenorhabditis elegans Hypothetical
           protein F33E2.2a protein.
          Length = 928

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +1

Query: 298 AARELLTLEEKDPKRLFEGNALLRSSGSYWST--G*KTDETRLCAWSED*GLLGASSADA 471
           A ++    E  +P ++   +A+ R SGSYW T  G +    R   +S+D G+  A +   
Sbjct: 553 AGQQTRRSEGANPPKILRNDAI-RHSGSYWETLGGARGSPARDSGFSQDSGMWSAGAGSC 611

Query: 472 GVQSWXGE 495
              +  G+
Sbjct: 612 TAINGGGQ 619


>AL022593-4|CAE54889.1|  921|Caenorhabditis elegans Hypothetical
           protein F33E2.2b protein.
          Length = 921

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +1

Query: 298 AARELLTLEEKDPKRLFEGNALLRSSGSYWST--G*KTDETRLCAWSED*GLLGASSADA 471
           A ++    E  +P ++   +A+ R SGSYW T  G +    R   +S+D G+  A +   
Sbjct: 553 AGQQTRRSEGANPPKILRNDAI-RHSGSYWETLGGARGSPARDSGFSQDSGMWSAGAGSC 611

Query: 472 GVQSWXGE 495
              +  G+
Sbjct: 612 TAINGGGQ 619


>AL022593-3|CAA18635.3|  928|Caenorhabditis elegans Hypothetical
           protein F33E2.2a protein.
          Length = 928

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +1

Query: 298 AARELLTLEEKDPKRLFEGNALLRSSGSYWST--G*KTDETRLCAWSED*GLLGASSADA 471
           A ++    E  +P ++   +A+ R SGSYW T  G +    R   +S+D G+  A +   
Sbjct: 553 AGQQTRRSEGANPPKILRNDAI-RHSGSYWETLGGARGSPARDSGFSQDSGMWSAGAGSC 611

Query: 472 GVQSWXGE 495
              +  G+
Sbjct: 612 TAINGGGQ 619


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,661,448
Number of Sequences: 27780
Number of extensions: 172551
Number of successful extensions: 317
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)