Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_L16
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 34 0.16
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 34 0.16
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 33 0.37
U29380-18|ABB88224.1| 733|Caenorhabditis elegans Zygote defecti... 32 0.64
U29380-17|AAA68733.3| 736|Caenorhabditis elegans Zygote defecti... 32 0.64
U29380-16|AAS60254.1| 761|Caenorhabditis elegans Zygote defecti... 32 0.64
U29380-15|AAS60253.1| 777|Caenorhabditis elegans Zygote defecti... 32 0.64
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr... 32 0.64
AY487140-1|AAR32790.1| 733|Caenorhabditis elegans centrosome at... 32 0.64
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 31 0.85
U70855-1|AAB09161.1| 390|Caenorhabditis elegans Hypothetical pr... 31 0.85
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 31 0.85
AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical ... 31 0.85
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 30 2.0
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 30 2.0
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 30 2.0
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 30 2.0
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 30 2.0
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 30 2.6
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 30 2.6
Z46381-9|CAI58660.1| 807|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z46381-8|CAA86517.2| 808|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z68117-4|CAA92180.1| 589|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z35663-13|CAA84729.1| 234|Caenorhabditis elegans Hypothetical p... 29 4.5
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 29 4.5
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 29 4.5
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 29 4.5
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 29 4.5
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 29 6.0
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 29 6.0
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 6.0
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 29 6.0
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 29 6.0
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 29 6.0
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 29 6.0
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 29 6.0
AF039720-1|AAB96694.1| 437|Caenorhabditis elegans Hypothetical ... 29 6.0
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 29 6.0
Z46787-6|CAA86744.1| 392|Caenorhabditis elegans Hypothetical pr... 28 7.9
L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with... 28 7.9
L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with... 28 7.9
AF025458-6|AAB70980.1| 153|Caenorhabditis elegans Hypothetical ... 28 7.9
AF000263-15|AAG00018.1| 416|Caenorhabditis elegans Hypothetical... 28 7.9
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 33.9 bits (74), Expect = 0.16
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Frame = +3
Query: 381 ARPREALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVQESQKLAKKV 551
A+ EA E++R+N E ELR+ + D+ + +AL R KL+ + E +++A ++
Sbjct: 1702 AQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIANEL 1761
Query: 552 SSNVQGD**ETGAQDQGRL-RRLREE 626
+ V+ + + D RL LR+E
Sbjct: 1762 KNAVEQG--QKASADAARLAEELRQE 1785
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/79 (27%), Positives = 30/79 (37%)
Frame = +3
Query: 324 ATAQRLRQESPGXRSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATALREKLQA 503
ATA +L + E A+ R E+ N E LRK H D T E LQ
Sbjct: 1169 ATAAQLEANK---KREAEIAKLRREKEEDSLNHETAISSLRKRHGDSVAELTEQLETLQK 1225
Query: 504 AVQNTVQESQKLAKKVSSN 560
+ E KL + + +
Sbjct: 1226 LKAKSEAEKSKLQRDLEES 1244
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 33.9 bits (74), Expect = 0.16
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Frame = +3
Query: 381 ARPREALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVQESQKLAKKV 551
A+ EA E++R+N E ELR+ + D+ + +AL R KL+ + E +++A ++
Sbjct: 1702 AQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIANEL 1761
Query: 552 SSNVQGD**ETGAQDQGRL-RRLREE 626
+ V+ + + D RL LR+E
Sbjct: 1762 KNAVEQG--QKASADAARLAEELRQE 1785
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/79 (27%), Positives = 30/79 (37%)
Frame = +3
Query: 324 ATAQRLRQESPGXRSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATALREKLQA 503
ATA +L + E A+ R E+ N E LRK H D T E LQ
Sbjct: 1169 ATAAQLEANK---KREAEIAKLRREKEEDSLNHETAISSLRKRHGDSVAELTEQLETLQK 1225
Query: 504 AVQNTVQESQKLAKKVSSN 560
+ E KL + + +
Sbjct: 1226 LKAKSEAEKSKLQRDLEES 1244
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 32.7 bits (71), Expect = 0.37
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +3
Query: 285 LQQGLEGRLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIE----RTAEELRKA 452
L++ E R+R++ +R+RQE +E R R E+ ++ +E R EE +
Sbjct: 2637 LRKEAEERMRIQRENEERVRQEQMRLEAEERERIRRAEEERIQKELEDKVRREKEEAARQ 2696
Query: 453 HPDVEKNATALREKLQAAVQNTVQESQKLAKK 548
+ ++ +RE +A + E Q+ +++
Sbjct: 2697 EKERQEQEARMREAREAELSRQRMEQQRRSQQ 2728
>U29380-18|ABB88224.1| 733|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform d protein.
Length = 733
Score = 31.9 bits (69), Expect = 0.64
Identities = 19/68 (27%), Positives = 37/68 (54%)
Frame = +3
Query: 363 RSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 542
++E + REA ++ N + E L+K ++E NATAL +K +A + S+ ++
Sbjct: 584 KAEVEAQQMREAKMRAETNQAQVDEILKKRTAELEVNATAL-QKAKAVIDELEYNSRPVS 642
Query: 543 KKVSSNVQ 566
+ ++VQ
Sbjct: 643 EDSMTSVQ 650
>U29380-17|AAA68733.3| 736|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform a protein.
Length = 736
Score = 31.9 bits (69), Expect = 0.64
Identities = 19/68 (27%), Positives = 37/68 (54%)
Frame = +3
Query: 363 RSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 542
++E + REA ++ N + E L+K ++E NATAL +K +A + S+ ++
Sbjct: 587 KAEVEAQQMREAKMRAETNQAQVDEILKKRTAELEVNATAL-QKAKAVIDELEYNSRPVS 645
Query: 543 KKVSSNVQ 566
+ ++VQ
Sbjct: 646 EDSMTSVQ 653
>U29380-16|AAS60254.1| 761|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform c protein.
Length = 761
Score = 31.9 bits (69), Expect = 0.64
Identities = 19/68 (27%), Positives = 37/68 (54%)
Frame = +3
Query: 363 RSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 542
++E + REA ++ N + E L+K ++E NATAL +K +A + S+ ++
Sbjct: 587 KAEVEAQQMREAKMRAETNQAQVDEILKKRTAELEVNATAL-QKAKAVIDELEYNSRPVS 645
Query: 543 KKVSSNVQ 566
+ ++VQ
Sbjct: 646 EDSMTSVQ 653
>U29380-15|AAS60253.1| 777|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform b protein.
Length = 777
Score = 31.9 bits (69), Expect = 0.64
Identities = 19/68 (27%), Positives = 37/68 (54%)
Frame = +3
Query: 363 RSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 542
++E + REA ++ N + E L+K ++E NATAL +K +A + S+ ++
Sbjct: 587 KAEVEAQQMREAKMRAETNQAQVDEILKKRTAELEVNATAL-QKAKAVIDELEYNSRPVS 645
Query: 543 KKVSSNVQ 566
+ ++VQ
Sbjct: 646 EDSMTSVQ 653
>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
protein C18H2.1 protein.
Length = 1770
Score = 31.9 bits (69), Expect = 0.64
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +1
Query: 43 DFDTLLCVAVRFASPPHSVSRQYIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTK 222
DF+ LL V +F+ + + Y K V C++ + + D +F KDI+ K
Sbjct: 552 DFNKLLEVH-KFSKRFYEFTN-YFKNNKPKVFLECVSRLRKTAI--DGENFVKDIQKTYK 607
Query: 223 EFHKTLEQQFNSLTKSKDAQ 282
+ HKTLE + + K +D Q
Sbjct: 608 KSHKTLESDSSPVLKLEDPQ 627
>AY487140-1|AAR32790.1| 733|Caenorhabditis elegans centrosome
attachment protein A protein.
Length = 733
Score = 31.9 bits (69), Expect = 0.64
Identities = 19/68 (27%), Positives = 37/68 (54%)
Frame = +3
Query: 363 RSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 542
++E + REA ++ N + E L+K ++E NATAL +K +A + S+ ++
Sbjct: 584 KAEVEAQQMREAKMRAETNQAQVDEILKKRTAELEVNATAL-QKAKAVIDELEYNSRPVS 642
Query: 543 KKVSSNVQ 566
+ ++VQ
Sbjct: 643 EDSMTSVQ 650
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +3
Query: 324 ATAQRLRQESPGXRSETRTARP--REALEQSRQNIERTAEELRKAHPDVEKNATALREKL 497
AT++ LR E S+ ++ R A E+ +N+ER E + D+E+ + + + +
Sbjct: 825 ATSESLRTECENLNSKIQSIEESRRHAEEKGSENLERMITEKSRLEKDIEERESTI-QSI 883
Query: 498 QAAVQNTVQESQKL 539
Q A++ E + L
Sbjct: 884 QEALETKDNEIESL 897
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +3
Query: 324 ATAQRLRQESPGXRSETRTARP--REALEQSRQNIERTAEELRKAHPDVEKNATALREKL 497
AT++ LR E S+ ++ R A E+ +N+ER E + D+E+ + + + +
Sbjct: 827 ATSESLRTECENLNSKIQSIEESRRHAEEKGSENLERMITEKSRLEKDIEERESTI-QSI 885
Query: 498 QAAVQNTVQESQKL 539
Q A++ E + L
Sbjct: 886 QEALETKDNEIESL 899
>U70855-1|AAB09161.1| 390|Caenorhabditis elegans Hypothetical
protein K08F11.3 protein.
Length = 390
Score = 31.5 bits (68), Expect = 0.85
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -1
Query: 422 DVLPRLFQSLPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSCASFDLVSELNC 246
+V P+ ++ W + + L K S T E F+AL+ CA L+ EL C
Sbjct: 92 NVAPQFYKGTGWASHAGIAVRVLSNLYKGYSNFHTVQEKIFKALVDMCAEARLIGELEC 150
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +3
Query: 324 ATAQRLRQESPGXRSETRTARP--REALEQSRQNIERTAEELRKAHPDVEKNATALREKL 497
AT++ LR E S+ ++ R A E+ +N+ER E + D+E+ + + + +
Sbjct: 827 ATSESLRTECENLNSKIQSIEESRRHAEEKGSENLERMITEKSRLEKDIEERESTI-QSI 885
Query: 498 QAAVQNTVQESQKL 539
Q A++ E + L
Sbjct: 886 QEALETKDNEIESL 899
>AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical
protein ZK973.11 protein.
Length = 447
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 220 KEFHKTLEQQFNSLTKSKDAQD-FSKAWKDGSESVLQ 327
+EFHKT E+ L K D + F AW DGS+ Q
Sbjct: 266 REFHKTAEEASKELRKHPDLWNRFQFAWLDGSDLASQ 302
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +3
Query: 339 LRQESPGXRSETRTARPREALEQSRQN-IERTAEELRKAHPDVE--KNATALREKLQAAV 509
L +E + + R R ++ R++ +++ +ELRKA + + +EKL +V
Sbjct: 375 LEKEEKRRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISV 434
Query: 510 QNTVQESQKLAKK 548
QN++ E+ + K+
Sbjct: 435 QNSLNEAHRQHKQ 447
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +3
Query: 339 LRQESPGXRSETRTARPREALEQSRQN-IERTAEELRKAHPDVE--KNATALREKLQAAV 509
L +E + + R R ++ R++ +++ +ELRKA + + +EKL +V
Sbjct: 375 LEKEEKRRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISV 434
Query: 510 QNTVQESQKLAKK 548
QN++ E+ + K+
Sbjct: 435 QNSLNEAHRQHKQ 447
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +3
Query: 339 LRQESPGXRSETRTARPREALEQSRQN-IERTAEELRKAHPDVE--KNATALREKLQAAV 509
L +E + + R R ++ R++ +++ +ELRKA + + +EKL +V
Sbjct: 135 LEKEEKRRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISV 194
Query: 510 QNTVQESQKLAKK 548
QN++ E+ + K+
Sbjct: 195 QNSLNEAHRQHKQ 207
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +3
Query: 339 LRQESPGXRSETRTARPREALEQSRQN-IERTAEELRKAHPDVE--KNATALREKLQAAV 509
L +E + + R R ++ R++ +++ +ELRKA + + +EKL +V
Sbjct: 375 LEKEEKRRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISV 434
Query: 510 QNTVQESQKLAKK 548
QN++ E+ + K+
Sbjct: 435 QNSLNEAHRQHKQ 447
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 30.3 bits (65), Expect = 2.0
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 390 REALEQSRQNIERTAEELR--KAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 563
REA + Q +E+ +ELR PD EKN L L AA+ ++E + A KV S
Sbjct: 281 REAAKAREQVLEKQVQELRLKLEEPDEEKN--QLVHNL-AALNAQIEELTQKALKVDSMQ 337
Query: 564 QGD**ETGAQDQGRLRRLREEH 629
QG T ++D R+R L H
Sbjct: 338 QG---ATASED--RIRELIGGH 354
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +1
Query: 163 GAMVRRDAPDFFKDIEHHTKEFH--KTLEQQFNSLTKSKDAQDFSKAWKDGSES 318
G +A ++F D++HHT F T + + +D D K W SE+
Sbjct: 519 GTSTSNEAREYFSDLDHHTVNFKYTGTTDDDAIRMAFDRDKSDERKEWIRRSEN 572
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 29.9 bits (64), Expect = 2.6
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Frame = +3
Query: 390 REALEQSRQNIERTAEELRKAHPDVEKNATALRE-KLQAAVQNT-----VQESQKLAKKV 551
+EAL +QN ER EL+K ++++ +E K + A +N+ VQE+Q L +K+
Sbjct: 179 KEALAAEKQNSEREKMELKKLTEELQRMNLENKELKNRVASENSRATGAVQEAQVLQEKL 238
Query: 552 SSNVQG-D**ETGAQDQGRLRRLREEHPGGDQEDPGGRQRXAVSVDI 689
++ D T Q +LR + D + ++ A+ V++
Sbjct: 239 QQALKALDEKTTKLTTQENAHKLRMDQFEDDTKKRHKKEIKALEVEV 285
>Z46381-9|CAI58660.1| 807|Caenorhabditis elegans Hypothetical
protein M01F1.4b protein.
Length = 807
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +3
Query: 384 RPREALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 563
RP E L + + E E + P+VEK +EKL A Q+ + S V +
Sbjct: 237 RPSEELLEKENSSENLDESILP--PNVEKVLETAKEKLDATEQSLLDNSLLSTSTVDEAI 294
Query: 564 QGD 572
GD
Sbjct: 295 TGD 297
>Z46381-8|CAA86517.2| 808|Caenorhabditis elegans Hypothetical
protein M01F1.4a protein.
Length = 808
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +3
Query: 384 RPREALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 563
RP E L + + E E + P+VEK +EKL A Q+ + S V +
Sbjct: 238 RPSEELLEKENSSENLDESILP--PNVEKVLETAKEKLDATEQSLLDNSLLSTSTVDEAI 295
Query: 564 QGD 572
GD
Sbjct: 296 TGD 298
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/68 (19%), Positives = 34/68 (50%)
Frame = +3
Query: 363 RSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 542
++ ++ + E L++ + + +E+LRK V+ + ++ VQE +KL
Sbjct: 2537 KTVSQDLKETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLK 2596
Query: 543 KKVSSNVQ 566
++ +N++
Sbjct: 2597 AEIDANIE 2604
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/68 (19%), Positives = 34/68 (50%)
Frame = +3
Query: 363 RSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 542
++ ++ + E L++ + + +E+LRK V+ + ++ VQE +KL
Sbjct: 2537 KTVSQDLKETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLK 2596
Query: 543 KKVSSNVQ 566
++ +N++
Sbjct: 2597 AEIDANIE 2604
>Z68117-4|CAA92180.1| 589|Caenorhabditis elegans Hypothetical
protein F45E6.2 protein.
Length = 589
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = +3
Query: 330 AQRLRQESPGXRSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAV 509
A + + E RS RT + + L+ NI+ E++++ D++K A+ +R+K
Sbjct: 464 AVQKKSEQAALRSRERTWKQLDLLKTGN-NIQLDNEKIQRKRQDIDKIASIVRQKGDTLY 522
Query: 510 QNTVQE 527
T+Q+
Sbjct: 523 IMTLQD 528
>Z35663-13|CAA84729.1| 234|Caenorhabditis elegans Hypothetical
protein T04A8.10 protein.
Length = 234
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/98 (22%), Positives = 43/98 (43%)
Frame = +3
Query: 363 RSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 542
R + RE + ER EE+ + +++ A L +Q ++ + Q A
Sbjct: 122 RLDGNVRETRERNAELDAEYERWKEEIGEEQVELDTKAEELEAAVQRELELERIDEQMAA 181
Query: 543 KKVSSNVQGD**ETGAQDQGRLRRLREEHPGGDQEDPG 656
K ++++ + +Q R RRL+ E P +++D G
Sbjct: 182 LKKLNDMEIQ--KEKRLNQARERRLKREEPEEEEDDDG 217
>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
potassium channelsprotein 2 protein.
Length = 1564
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +3
Query: 414 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 566
+N+++ A+ ++K KN + +K + + QK+ KK + NVQ
Sbjct: 1276 KNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKCAKNVQKMCKKCAKNVQ 1326
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/68 (19%), Positives = 34/68 (50%)
Frame = +3
Query: 363 RSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 542
++ ++ + E L++ + + +E+LRK V+ + ++ VQE +KL
Sbjct: 351 KTVSQDLKETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLK 410
Query: 543 KKVSSNVQ 566
++ +N++
Sbjct: 411 AEIDANIE 418
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/68 (19%), Positives = 34/68 (50%)
Frame = +3
Query: 363 RSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 542
++ ++ + E L++ + + +E+LRK V+ + ++ VQE +KL
Sbjct: 2537 KTVSQDLKETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLK 2596
Query: 543 KKVSSNVQ 566
++ +N++
Sbjct: 2597 AEIDANIE 2604
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/68 (19%), Positives = 34/68 (50%)
Frame = +3
Query: 363 RSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 542
++ ++ + E L++ + + +E+LRK V+ + ++ VQE +KL
Sbjct: 2537 KTVSQDLKETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLK 2596
Query: 543 KKVSSNVQ 566
++ +N++
Sbjct: 2597 AEIDANIE 2604
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 393 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQ 512
E +Q N+ + ++ K H DV+ ++ALR L A Q
Sbjct: 33 EVFDQHAANLNKQSKSCEKLHKDVKNYSSALRTLLSAEKQ 72
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/91 (21%), Positives = 42/91 (46%)
Frame = +3
Query: 291 QGLEGRLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTAEELRKAHPDVEK 470
+ L RL+ + + + + E++ R L+ + +E+ EEL+K+H +
Sbjct: 693 EDLADRLQAAQILSGNVESKFSDMQKESKIEMER-ILDNHNKELEKLREELKKSHTEHTS 751
Query: 471 NATALREKLQAAVQNTVQESQKLAKKVSSNV 563
+ L E+ Q +Q+ + K+ SSN+
Sbjct: 752 LESVLEEQQNELAQ--LQDQLREEKEQSSNL 780
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/91 (21%), Positives = 42/91 (46%)
Frame = +3
Query: 291 QGLEGRLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTAEELRKAHPDVEK 470
+ L RL+ + + + + E++ R L+ + +E+ EEL+K+H +
Sbjct: 693 EDLADRLQAAQILSGNVESKFSDMQKESKIEMER-ILDNHNKELEKLREELKKSHTEHTS 751
Query: 471 NATALREKLQAAVQNTVQESQKLAKKVSSNV 563
+ L E+ Q +Q+ + K+ SSN+
Sbjct: 752 LESVLEEQQNELAQ--LQDQLREEKEQSSNL 780
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -1
Query: 446 AELLGRALDVLPRLFQSLPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSC 279
AEL +AL+ L L QS+P C L + L D+ PS + SC
Sbjct: 161 AELCVQALESLLSLIQSMPIDCLQSENRLSMSAMMHVLKTLREDACPSVSSKATSC 216
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 306 RLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATAL 485
R R+ +R R+E + + REA ++ RQ +E A E+R+ E+ A
Sbjct: 457 RERLELERIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRRE---EERREA- 512
Query: 486 REKLQAAVQNTVQESQKLAKK 548
+L A V +E ++L K+
Sbjct: 513 --ELVADVHRQAEERERLRKR 531
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 306 RLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATAL 485
R R+ +R R+E + + REA ++ RQ +E A E+R+ E+ A
Sbjct: 457 RERLELERIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRRE---EERREA- 512
Query: 486 REKLQAAVQNTVQESQKLAKK 548
+L A V +E ++L K+
Sbjct: 513 --ELVADVHRQAEERERLRKR 531
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 306 RLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATAL 485
R R+ +R R+E + + REA ++ RQ +E A E+R+ E+ A
Sbjct: 457 RERLELERIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRRE---EERREA- 512
Query: 486 REKLQAAVQNTVQESQKLAKK 548
+L A V +E ++L K+
Sbjct: 513 --ELVADVHRQAEERERLRKR 531
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 306 RLRVRAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATAL 485
R R+ +R R+E + + REA ++ RQ +E A E+R+ E+ A
Sbjct: 457 RERLELERIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRRE---EERREA- 512
Query: 486 REKLQAAVQNTVQESQKLAKK 548
+L A V +E ++L K+
Sbjct: 513 --ELVADVHRQAEERERLRKR 531
>AF039720-1|AAB96694.1| 437|Caenorhabditis elegans Hypothetical
protein F33D11.5 protein.
Length = 437
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 357 GXRSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNAT 479
G R + +P+E ++ + + + EE+RK +P+ EK T
Sbjct: 289 GRRINFKRRQPKEQMDVQVKELLKIIEEIRKRYPEKEKITT 329
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -1
Query: 446 AELLGRALDVLPRLFQSLPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSC 279
AEL +AL+ L L QS+P C L + L D+ PS + SC
Sbjct: 161 AELCVQALESLLSLIQSMPIDCLQSENRLSMSAMMHVLKTLREDACPSVSSKATSC 216
>Z46787-6|CAA86744.1| 392|Caenorhabditis elegans Hypothetical
protein C16C10.6 protein.
Length = 392
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +3
Query: 333 QRLRQESPGXRSETRTARPREALEQSRQ---NIERTAEELRKAHPDVEKNATALREKLQA 503
Q+L + G AR A++Q ++ N+ + + + P EK+ EKL+
Sbjct: 176 QKLWEIGMGRTLLNDLARDPTAIKQRKKEQKNVRKREDSDEEIDPKPEKSDKKPAEKLKK 235
Query: 504 AVQNTVQESQKLAKKVSSNVQGD 572
++ + + +K K N +GD
Sbjct: 236 SIYSDDSDEEKAPKPPQKNFEGD 258
>L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
b protein.
Length = 926
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 276 RTGLQQGLEGRLRVRAATAQRLRQESPGXRSETRTARPREALE--QSRQN 419
R + G E RLR++ A R R E+PG + T + E +E RQN
Sbjct: 560 RKSIAVGGENRLRLKTFIAGRNRLENPGAHALAATFKALETVEWFDVRQN 609
>L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
a protein.
Length = 960
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 276 RTGLQQGLEGRLRVRAATAQRLRQESPGXRSETRTARPREALE--QSRQN 419
R + G E RLR++ A R R E+PG + T + E +E RQN
Sbjct: 597 RKSIAVGGENRLRLKTFIAGRNRLENPGAHALAATFKALETVEWFDVRQN 646
>AF025458-6|AAB70980.1| 153|Caenorhabditis elegans Hypothetical
protein C01B12.8 protein.
Length = 153
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/61 (29%), Positives = 36/61 (59%)
Frame = +3
Query: 366 SETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAK 545
++ +T+ PR +L++S + E T +L A ++NA A++ +A + ++ +KLAK
Sbjct: 80 AKRKTSTPR-SLKKSSRCREMTESDLELAK---KRNADAMKHLREAKKKKEKEQEEKLAK 135
Query: 546 K 548
K
Sbjct: 136 K 136
>AF000263-15|AAG00018.1| 416|Caenorhabditis elegans Hypothetical
protein T08B2.11 protein.
Length = 416
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/77 (20%), Positives = 35/77 (45%)
Frame = +3
Query: 318 RAATAQRLRQESPGXRSETRTARPREALEQSRQNIERTAEELRKAHPDVEKNATALREKL 497
+++ + L ++ G + + + + E ++ ++ ++ K P+ EKN L + L
Sbjct: 106 KSSLSASLEGKTSGENEAPKAEQKKSSTESGKKQVDLNSDG-SKEPPEEEKNKQKLNKDL 164
Query: 498 QAAVQNTVQESQKLAKK 548
+QES K KK
Sbjct: 165 AKHFFKHIQESHKSRKK 181
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,051,673
Number of Sequences: 27780
Number of extensions: 212429
Number of successful extensions: 1093
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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