Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_L13
(1157 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 43 4e-04
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 43 4e-04
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 43 4e-04
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.006
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.006
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.006
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.072
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.072
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 34 0.17
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 34 0.22
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 34 0.22
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 33 0.29
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 33 0.29
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.38
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.67
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 32 0.67
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 32 0.67
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 32 0.67
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 1.5
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.5
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.5
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 1.5
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 27 1.9
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 27 2.0
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 2.0
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 4.7
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 4.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.7
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 6.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 8.2
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 24 8.9
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 43.2 bits (97), Expect = 4e-04
Identities = 30/104 (28%), Positives = 31/104 (29%), Gaps = 2/104 (1%)
Frame = +1
Query: 229 PPXXGXPPXXXXFXPPKKNXXXPFXXXIFXXPPKXLGGGXXPPXXXNPXXFFXGGGGGXX 408
P PP PP P PP G PP +P GG
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP---PPAGGSP 289
Query: 409 PPXXXG--PPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPP 534
PP G PP P G P P G G PPPPP
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Score = 33.5 bits (73), Expect = 0.29
Identities = 24/96 (25%), Positives = 27/96 (28%), Gaps = 4/96 (4%)
Frame = +1
Query: 352 PPXXXNPXXFFXGGGGGXXPPXXXGPPXPXKXGGAPXXKXXXX----FFFSXPXXXGXGP 519
PP +P G G PP G P P + G P S P P
Sbjct: 241 PPPKGSPPL---AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 520 PPPPPXKXXGXXXXXXPXXGXXXXXXXXXXXXXPPP 627
PPPPP + P PPP
Sbjct: 298 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -3
Query: 459 GXPPXFXGGGGXPXXXGXXXPPPPXKKXXGVXXXRGXXPPPQXFG 325
G PP GG P PPPP + G PPPQ G
Sbjct: 278 GSPPPPPAGGSPPPPRAGSPPPPPPPRG---SPPTGSLPPPQAGG 319
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 43.2 bits (97), Expect = 4e-04
Identities = 30/104 (28%), Positives = 31/104 (29%), Gaps = 2/104 (1%)
Frame = +1
Query: 229 PPXXGXPPXXXXFXPPKKNXXXPFXXXIFXXPPKXLGGGXXPPXXXNPXXFFXGGGGGXX 408
P PP PP P PP G PP +P GG
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP---PPAGGSP 310
Query: 409 PPXXXG--PPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPP 534
PP G PP P G P P G G PPPPP
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Score = 33.5 bits (73), Expect = 0.29
Identities = 24/96 (25%), Positives = 27/96 (28%), Gaps = 4/96 (4%)
Frame = +1
Query: 352 PPXXXNPXXFFXGGGGGXXPPXXXGPPXPXKXGGAPXXKXXXX----FFFSXPXXXGXGP 519
PP +P G G PP G P P + G P S P P
Sbjct: 262 PPPKGSPPL---AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 520 PPPPPXKXXGXXXXXXPXXGXXXXXXXXXXXXXPPP 627
PPPPP + P PPP
Sbjct: 319 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -3
Query: 459 GXPPXFXGGGGXPXXXGXXXPPPPXKKXXGVXXXRGXXPPPQXFG 325
G PP GG P PPPP + G PPPQ G
Sbjct: 299 GSPPPPPAGGSPPPPRAGSPPPPPPPRG---SPPTGSLPPPQAGG 340
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 43.2 bits (97), Expect = 4e-04
Identities = 30/104 (28%), Positives = 31/104 (29%), Gaps = 2/104 (1%)
Frame = +1
Query: 229 PPXXGXPPXXXXFXPPKKNXXXPFXXXIFXXPPKXLGGGXXPPXXXNPXXFFXGGGGGXX 408
P PP PP P PP G PP +P GG
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP---PPAGGSP 295
Query: 409 PPXXXG--PPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPP 534
PP G PP P G P P G G PPPPP
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Score = 33.5 bits (73), Expect = 0.29
Identities = 24/96 (25%), Positives = 27/96 (28%), Gaps = 4/96 (4%)
Frame = +1
Query: 352 PPXXXNPXXFFXGGGGGXXPPXXXGPPXPXKXGGAPXXKXXXX----FFFSXPXXXGXGP 519
PP +P G G PP G P P + G P S P P
Sbjct: 247 PPPKGSPPL---AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 520 PPPPPXKXXGXXXXXXPXXGXXXXXXXXXXXXXPPP 627
PPPPP + P PPP
Sbjct: 304 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -3
Query: 459 GXPPXFXGGGGXPXXXGXXXPPPPXKKXXGVXXXRGXXPPPQXFG 325
G PP GG P PPPP + G PPPQ G
Sbjct: 284 GSPPPPPAGGSPPPPRAGSPPPPPPPRG---SPPTGSLPPPQAGG 325
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.1 bits (87), Expect = 0.006
Identities = 25/71 (35%), Positives = 26/71 (36%)
Frame = +2
Query: 323 PPXXWGGGXXPLFXKTPSXFLXGGGGXXXPXXXGXPPPPXKXGGXPXEKXXXXFFFXXXX 502
PP GG P+ P GG P G PPPP GG P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGG---LPPISGGPPPPPPPPGGCPPPPPPP----PPGG 779
Query: 503 FXGXXPPPPPP 535
F G PPPPPP
Sbjct: 780 FKGGPPPPPPP 790
Score = 37.9 bits (84), Expect = 0.013
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +1
Query: 400 GXXPPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPPXKXXGXXXXXXP 570
G PP GPP P GG P P G PPPPPP G P
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPP---PPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 33.1 bits (72), Expect = 0.38
Identities = 22/70 (31%), Positives = 22/70 (31%)
Frame = +1
Query: 229 PPXXGXPPXXXXFXPPKKNXXXPFXXXIFXXPPKXLGGGXXPPXXXNPXXFFXGGGGGXX 408
PP G PP PP P PP GG PP P F GG
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Query: 409 PPXXXGPPXP 438
PP P P
Sbjct: 789 PPGMFAPMAP 798
Score = 32.3 bits (70), Expect = 0.67
Identities = 25/89 (28%), Positives = 25/89 (28%)
Frame = +3
Query: 510 GGXPPPPPXXXXXGGXXXXXPXGGXXFXXXXXXXXXXPPPXGXXXXXXXXXXXXXXXXXP 689
GG PPPP GG P GG PPP G P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGG--LPPITGGPPPPPPPGG---------LPPISGGPP 759
Query: 690 PXXRXXGGGXXPXPXXPXXXXXXXPPXXP 776
P GG P P P PP P
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 31.9 bits (69), Expect = 0.89
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Frame = +1
Query: 391 GGGGXXPPXXXGPPXPXK----XGGAPXXKXXXXFFFSXPXXXGXGPPPPPP 534
GG PP GPP P GG P P G PPPPPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPG----GLPPITGGPPPPPPP 748
Score = 31.9 bits (69), Expect = 0.89
Identities = 29/102 (28%), Positives = 29/102 (28%)
Frame = +1
Query: 229 PPXXGXPPXXXXFXPPKKNXXXPFXXXIFXXPPKXLGGGXXPPXXXNPXXFFXGGGGGXX 408
PP G PP PP P I PP G PP P GG
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGG--C 768
Query: 409 PPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPP 534
PP PP GG P F P PP P
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 31.9 bits (69), Expect = 0.89
Identities = 25/81 (30%), Positives = 25/81 (30%), Gaps = 5/81 (6%)
Frame = +1
Query: 409 PPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXG-----XGPPPPPPXKXXGXXXXXXPX 573
PP GPP P GG P P G GPPPPPP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPP---PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 574 XGXXXXXXXXXXXXXPPPPXG 636
G PPPP G
Sbjct: 777 PG------GFKGGPPPPPPPG 791
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = -3
Query: 531 GGGGGXXPXXXXXXKKKXXXXFSXGXPPXFXGGGGXPXXXGXXXPPPPXKKXXGVXXXRG 352
GG P + G PP GG P G PPPP G+ G
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP----GGLPPISG 756
Query: 351 XXPPP 337
PPP
Sbjct: 757 GPPPP 761
Score = 29.9 bits (64), Expect = 3.6
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -3
Query: 459 GXPPXFXGGGGXPXXXGXXXPPPPXKKXXGVXXXRGXXPPPQXF 328
G PP G P G PPPP G PPP F
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.1 bits (87), Expect = 0.006
Identities = 25/71 (35%), Positives = 26/71 (36%)
Frame = +2
Query: 323 PPXXWGGGXXPLFXKTPSXFLXGGGGXXXPXXXGXPPPPXKXGGXPXEKXXXXFFFXXXX 502
PP GG P+ P GG P G PPPP GG P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGG---LPPISGGPPPPPPPPGGCPPPPPPP----PPGG 779
Query: 503 FXGXXPPPPPP 535
F G PPPPPP
Sbjct: 780 FKGGPPPPPPP 790
Score = 37.9 bits (84), Expect = 0.013
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +1
Query: 400 GXXPPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPPXKXXGXXXXXXP 570
G PP GPP P GG P P G PPPPPP G P
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPP---PPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 33.1 bits (72), Expect = 0.38
Identities = 22/70 (31%), Positives = 22/70 (31%)
Frame = +1
Query: 229 PPXXGXPPXXXXFXPPKKNXXXPFXXXIFXXPPKXLGGGXXPPXXXNPXXFFXGGGGGXX 408
PP G PP PP P PP GG PP P F GG
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Query: 409 PPXXXGPPXP 438
PP P P
Sbjct: 789 PPGMFAPMAP 798
Score = 32.3 bits (70), Expect = 0.67
Identities = 25/89 (28%), Positives = 25/89 (28%)
Frame = +3
Query: 510 GGXPPPPPXXXXXGGXXXXXPXGGXXFXXXXXXXXXXPPPXGXXXXXXXXXXXXXXXXXP 689
GG PPPP GG P GG PPP G P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGG--LPPITGGPPPPPPPGG---------LPPISGGPP 759
Query: 690 PXXRXXGGGXXPXPXXPXXXXXXXPPXXP 776
P GG P P P PP P
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 31.9 bits (69), Expect = 0.89
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Frame = +1
Query: 391 GGGGXXPPXXXGPPXPXK----XGGAPXXKXXXXFFFSXPXXXGXGPPPPPP 534
GG PP GPP P GG P P G PPPPPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPG----GLPPITGGPPPPPPP 748
Score = 31.9 bits (69), Expect = 0.89
Identities = 29/102 (28%), Positives = 29/102 (28%)
Frame = +1
Query: 229 PPXXGXPPXXXXFXPPKKNXXXPFXXXIFXXPPKXLGGGXXPPXXXNPXXFFXGGGGGXX 408
PP G PP PP P I PP G PP P GG
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGG--C 768
Query: 409 PPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPP 534
PP PP GG P F P PP P
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 31.9 bits (69), Expect = 0.89
Identities = 25/81 (30%), Positives = 25/81 (30%), Gaps = 5/81 (6%)
Frame = +1
Query: 409 PPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXG-----XGPPPPPPXKXXGXXXXXXPX 573
PP GPP P GG P P G GPPPPPP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPP---PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 574 XGXXXXXXXXXXXXXPPPPXG 636
G PPPP G
Sbjct: 777 PG------GFKGGPPPPPPPG 791
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = -3
Query: 531 GGGGGXXPXXXXXXKKKXXXXFSXGXPPXFXGGGGXPXXXGXXXPPPPXKKXXGVXXXRG 352
GG P + G PP GG P G PPPP G+ G
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP----GGLPPISG 756
Query: 351 XXPPP 337
PPP
Sbjct: 757 GPPPP 761
Score = 29.9 bits (64), Expect = 3.6
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -3
Query: 459 GXPPXFXGGGGXPXXXGXXXPPPPXKKXXGVXXXRGXXPPPQXF 328
G PP G P G PPPP G PPP F
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.1 bits (87), Expect = 0.006
Identities = 25/71 (35%), Positives = 26/71 (36%)
Frame = +2
Query: 323 PPXXWGGGXXPLFXKTPSXFLXGGGGXXXPXXXGXPPPPXKXGGXPXEKXXXXFFFXXXX 502
PP GG P+ P GG P G PPPP GG P
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGG---LPPISGGPPPPPPPPGGCPPPPPPP----PPGG 362
Query: 503 FXGXXPPPPPP 535
F G PPPPPP
Sbjct: 363 FKGGPPPPPPP 373
Score = 37.9 bits (84), Expect = 0.013
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +1
Query: 400 GXXPPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPPXKXXGXXXXXXP 570
G PP GPP P GG P P G PPPPPP G P
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPP---PPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 33.1 bits (72), Expect = 0.38
Identities = 22/70 (31%), Positives = 22/70 (31%)
Frame = +1
Query: 229 PPXXGXPPXXXXFXPPKKNXXXPFXXXIFXXPPKXLGGGXXPPXXXNPXXFFXGGGGGXX 408
PP G PP PP P PP GG PP P F GG
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Query: 409 PPXXXGPPXP 438
PP P P
Sbjct: 372 PPGMFAPMAP 381
Score = 32.3 bits (70), Expect = 0.67
Identities = 25/89 (28%), Positives = 25/89 (28%)
Frame = +3
Query: 510 GGXPPPPPXXXXXGGXXXXXPXGGXXFXXXXXXXXXXPPPXGXXXXXXXXXXXXXXXXXP 689
GG PPPP GG P GG PPP G P
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGG--LPPITGGPPPPPPPGG---------LPPISGGPP 342
Query: 690 PXXRXXGGGXXPXPXXPXXXXXXXPPXXP 776
P GG P P P PP P
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 31.9 bits (69), Expect = 0.89
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Frame = +1
Query: 391 GGGGXXPPXXXGPPXPXK----XGGAPXXKXXXXFFFSXPXXXGXGPPPPPP 534
GG PP GPP P GG P P G PPPPPP
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPG----GLPPITGGPPPPPPP 331
Score = 31.9 bits (69), Expect = 0.89
Identities = 29/102 (28%), Positives = 29/102 (28%)
Frame = +1
Query: 229 PPXXGXPPXXXXFXPPKKNXXXPFXXXIFXXPPKXLGGGXXPPXXXNPXXFFXGGGGGXX 408
PP G PP PP P I PP G PP P GG
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGG--C 351
Query: 409 PPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPP 534
PP PP GG P F P PP P
Sbjct: 352 PPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 393
Score = 31.9 bits (69), Expect = 0.89
Identities = 25/81 (30%), Positives = 25/81 (30%), Gaps = 5/81 (6%)
Frame = +1
Query: 409 PPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXG-----XGPPPPPPXKXXGXXXXXXPX 573
PP GPP P GG P P G GPPPPPP P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPP---PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Query: 574 XGXXXXXXXXXXXXXPPPPXG 636
G PPPP G
Sbjct: 360 PG------GFKGGPPPPPPPG 374
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = -3
Query: 531 GGGGGXXPXXXXXXKKKXXXXFSXGXPPXFXGGGGXPXXXGXXXPPPPXKKXXGVXXXRG 352
GG P + G PP GG P G PPPP G+ G
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP----GGLPPISG 339
Query: 351 XXPPP 337
PPP
Sbjct: 340 GPPPP 344
Score = 29.9 bits (64), Expect = 3.6
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -3
Query: 459 GXPPXFXGGGGXPXXXGXXXPPPPXKKXXGVXXXRGXXPPPQXF 328
G PP G P G PPPP G PPP F
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.5 bits (78), Expect = 0.072
Identities = 34/136 (25%), Positives = 36/136 (26%), Gaps = 2/136 (1%)
Frame = +1
Query: 229 PPXXGXPPXXXXFXPPKKNXXXPFXXXIFXXPPKXLGGGXXPPXXXNPXXFFXGGGG--G 402
PP PP PP P + PP G PP P G G G
Sbjct: 261 PPVPPPPPSVTPMPPPM-----PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPG 315
Query: 403 XXPPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPPXKXXGXXXXXXPXXGX 582
PP P GG P + G PPPPP G P
Sbjct: 316 MPPPPPPSRFGPPGMGGMPPPPPPGMRY-----PGGMPPPPPPRYPSAGPGMYPPPPPSR 370
Query: 583 XXXXXXXXXXXXPPPP 630
PPPP
Sbjct: 371 PPAPPSGHGMIPPPPP 386
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.5 bits (78), Expect = 0.072
Identities = 34/136 (25%), Positives = 36/136 (26%), Gaps = 2/136 (1%)
Frame = +1
Query: 229 PPXXGXPPXXXXFXPPKKNXXXPFXXXIFXXPPKXLGGGXXPPXXXNPXXFFXGGGG--G 402
PP PP PP P + PP G PP P G G G
Sbjct: 271 PPVPPPPPSVTPMPPPM-----PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPG 325
Query: 403 XXPPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPPXKXXGXXXXXXPXXGX 582
PP P GG P + G PPPPP G P
Sbjct: 326 MPPPPPPSRFGPPGMGGMPPPPPPGMRY-----PGGMPPPPPPRYPSAGPGMYPPPPPSR 380
Query: 583 XXXXXXXXXXXXPPPP 630
PPPP
Sbjct: 381 PPAPPSGHGMIPPPPP 396
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 34.3 bits (75), Expect = 0.17
Identities = 34/106 (32%), Positives = 34/106 (32%), Gaps = 6/106 (5%)
Frame = +1
Query: 229 PPXXGXP-PXXXXFXPPKKNXXXPFXXXIFXXPPKXLGGGXXPPXXXNPXXFFXGGG--G 399
PP G P P PP PF PP GG PP NP GG G
Sbjct: 386 PPSGGPPGPFDPSGAPPSGGPPGPFNPS--GAPPS---GG--PPGPFNPSGAPPSGGPPG 438
Query: 400 GXXP---PXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPP 528
P P GPP P GAP F GPP P
Sbjct: 439 PFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGP 484
Score = 33.5 bits (73), Expect = 0.29
Identities = 28/101 (27%), Positives = 28/101 (27%), Gaps = 1/101 (0%)
Frame = +1
Query: 229 PPXXGXP-PXXXXFXPPKKNXXXPFXXXIFXXPPKXLGGGXXPPXXXNPXXFFXGGGGGX 405
PP G P P PP PF PP G P P G
Sbjct: 266 PPSGGPPGPFDPSGAPPSGGPPGPFDPS--GAPPSGGPPGPFDPSGAQPSGGPPGPFNPS 323
Query: 406 XPPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPP 528
P GPP P GAP F GPP P
Sbjct: 324 GAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP 364
Score = 33.1 bits (72), Expect = 0.38
Identities = 28/101 (27%), Positives = 28/101 (27%), Gaps = 1/101 (0%)
Frame = +1
Query: 229 PPXXGXP-PXXXXFXPPKKNXXXPFXXXIFXXPPKXLGGGXXPPXXXNPXXFFXGGGGGX 405
PP G P P PP PF PP G P P G
Sbjct: 356 PPSGGPPGPFDPSGAPPSGGPPGPFDPS--GAPPSGGPPGPFDPSGAPPSGGPPGPFNPS 413
Query: 406 XPPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPP 528
P GPP P GAP F GPP P
Sbjct: 414 GAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGP 454
Score = 32.7 bits (71), Expect = 0.51
Identities = 28/101 (27%), Positives = 28/101 (27%), Gaps = 1/101 (0%)
Frame = +1
Query: 229 PPXXGXP-PXXXXFXPPKKNXXXPFXXXIFXXPPKXLGGGXXPPXXXNPXXFFXGGGGGX 405
PP G P P PP PF PP G P P G
Sbjct: 176 PPSGGPPGPFGPSGAPPSGGPPGPFNPS--EAPPSGGPTGPFDPSGAPPSGGPPGPFNPS 233
Query: 406 XPPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPP 528
P GPP P GAP F GPP P
Sbjct: 234 GAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP 274
Score = 31.1 bits (67), Expect = 1.5
Identities = 32/114 (28%), Positives = 32/114 (28%), Gaps = 14/114 (12%)
Frame = +1
Query: 229 PPXXGXP-PXXXXFXPPKKNXXXPFXXX---IFXXPPKXLGGGXXPPXXXNPXXFFXGG- 393
PP G P P PP PF PP PP P F G
Sbjct: 191 PPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 250
Query: 394 ---GGGXXP------PXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPP 528
GG P P GPP P GAP F GPP P
Sbjct: 251 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGP 304
Score = 31.1 bits (67), Expect = 1.5
Identities = 32/114 (28%), Positives = 32/114 (28%), Gaps = 14/114 (12%)
Frame = +1
Query: 229 PPXXGXP-PXXXXFXPPKKNXXXPFXXX---IFXXPPKXLGGGXXPPXXXNPXXFFXGG- 393
PP G P P PP PF PP PP P F G
Sbjct: 281 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 340
Query: 394 ---GGGXXP------PXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPP 528
GG P P GPP P GAP F GPP P
Sbjct: 341 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGP 394
Score = 29.5 bits (63), Expect = 4.7
Identities = 23/78 (29%), Positives = 23/78 (29%), Gaps = 1/78 (1%)
Frame = +1
Query: 229 PPXXGXP-PXXXXFXPPKKNXXXPFXXXIFXXPPKXLGGGXXPPXXXNPXXFFXGGGGGX 405
PP G P P PP PF PP G P P G
Sbjct: 446 PPSGGPPGPFNPSGAPPSGGPPGPFNPS--GAPPSGGPPGPFDPSGAPPSGGPPGPFNPS 503
Query: 406 XPPXXXGPPXPXKXGGAP 459
P GPP P GAP
Sbjct: 504 GAPPSGGPPGPFDPSGAP 521
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 33.9 bits (74), Expect = 0.22
Identities = 29/100 (29%), Positives = 31/100 (31%)
Frame = +1
Query: 232 PXXGXPPXXXXFXPPKKNXXXPFXXXIFXXPPKXLGGGXXPPXXXNPXXFFXGGGGGXXP 411
P PP F PP + P PP +G G PP P F G G P
Sbjct: 285 PYAMMPPPFGFFPPPPRGHFPP-------PPPHFMGRGMPPPFMPPPPHFGMGPPRGFMP 337
Query: 412 PXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPP 531
PP P G P FF P P PP
Sbjct: 338 -----PPHPMMFRGGPYPP-----FFPPPPPHFMRPSSPP 367
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +1
Query: 400 GXXPPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPPXKXXGXXXXXXP 570
G P GPP P P F F P G PPPPP G P
Sbjct: 269 GPPPHHPYGPPHPMHH---PYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMP 322
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 33.9 bits (74), Expect = 0.22
Identities = 29/100 (29%), Positives = 31/100 (31%)
Frame = +1
Query: 232 PXXGXPPXXXXFXPPKKNXXXPFXXXIFXXPPKXLGGGXXPPXXXNPXXFFXGGGGGXXP 411
P PP F PP + P PP +G G PP P F G G P
Sbjct: 285 PYAMMPPPFGFFPPPPRGHFPP-------PPPHFMGRGMPPPFMPPPPHFGMGPPRGFMP 337
Query: 412 PXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPP 531
PP P G P FF P P PP
Sbjct: 338 -----PPHPMMFRGGPYPP-----FFPPPPPHFMRPSSPP 367
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +1
Query: 400 GXXPPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPPXKXXGXXXXXXP 570
G P GPP P P F F P G PPPPP G P
Sbjct: 269 GPPPHHPYGPPHPMHH---PYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMP 322
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 33.5 bits (73), Expect = 0.29
Identities = 19/46 (41%), Positives = 20/46 (43%)
Frame = +1
Query: 322 PPKXLGGGXXPPXXXNPXXFFXGGGGGXXPPXXXGPPXPXKXGGAP 459
PP+ G G PP P GGGGG PP P P GG P
Sbjct: 782 PPRG-GPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGP---GGPP 823
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 33.5 bits (73), Expect = 0.29
Identities = 19/46 (41%), Positives = 20/46 (43%)
Frame = +1
Query: 322 PPKXLGGGXXPPXXXNPXXFFXGGGGGXXPPXXXGPPXPXKXGGAP 459
PP+ G G PP P GGGGG PP P P GG P
Sbjct: 782 PPRG-GPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGP---GGPP 823
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.1 bits (72), Expect = 0.38
Identities = 31/115 (26%), Positives = 32/115 (27%), Gaps = 14/115 (12%)
Frame = +1
Query: 232 PXXGXPPXXXXFXPPKKNXXXPFXXXIFXXPPKXLG--GGXXPPXXXNPXXFFX------ 387
P G PP PP + P PP G PP P F
Sbjct: 338 PPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAF 397
Query: 388 ------GGGGGXXPPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPP 534
GG GG PP GP P G F P G G PPP
Sbjct: 398 GAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGG----FGPPPPGGPGAYGPPP 448
Score = 31.9 bits (69), Expect = 0.89
Identities = 26/103 (25%), Positives = 31/103 (30%), Gaps = 1/103 (0%)
Frame = +1
Query: 229 PPXXGXPPXXXXFXPPKKNXXXPFXXXIFXXPPKXLGGGXXPPXXXNPXXFFXGGGGGXX 408
PP G P + PP++ P + G P P G G
Sbjct: 296 PPPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQGGPPQ----GSFGAP 351
Query: 409 PPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXG-XGPPPPPP 534
PP P P GG P F+ P G G PPP
Sbjct: 352 PPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPP 394
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.3 bits (70), Expect = 0.67
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +1
Query: 409 PPXXXG--PPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPP 534
PP G PP P GG P P G PPPPPP
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
Score = 28.7 bits (61), Expect = 8.2
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +2
Query: 428 PPPPXKXGGXPXEKXXXXFFFXXXXFXGXXPPPPPPXKXXG 550
PPPP GG P G PPPPPP G
Sbjct: 85 PPPPMFAGGIPPPPPMMGGIPPPPPMFGA-PPPPPPPSGLG 124
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 32.3 bits (70), Expect = 0.67
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +1
Query: 388 GGGGGXXPPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPPXKXXG 549
GGGGG P P A + P G PPPPPP G
Sbjct: 23 GGGGGCCQPSQPACANPCGGASAAAYAAPAAGYPRPPIGYGAPPPPPPPPAFGG 76
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 32.3 bits (70), Expect = 0.67
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +1
Query: 388 GGGGGXXPPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPPXKXXG 549
GGGGG P P A + P G PPPPPP G
Sbjct: 23 GGGGGCCQPSQPACANPCGGASAAAYAAPAAGYPRPPIGYGAPPPPPPPPAFGG 76
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 32.3 bits (70), Expect = 0.67
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +1
Query: 388 GGGGGXXPPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPPXKXXG 549
GGGGG P P A + P G PPPPPP G
Sbjct: 23 GGGGGCCQPSQPACANPCGGASAAAYAAPAAGYPRPPIGYGAPPPPPPPPAFGG 76
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = +1
Query: 322 PPKXLGGGXXPPXXXNPXXFFXGGGGGXXPPXXXGPPXPXKXGGAP 459
PP+ G G PP P GGGGG PP P GAP
Sbjct: 782 PPRG-GPGAPPPPGMRPPPGAPGGGGGMYPPLIP-TRVPTPSNGAP 825
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.1 bits (67), Expect = 1.5
Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
Frame = -3
Query: 540 FXGGGGGGXXPXXXXXXKKKXXXXFSXGX-PPXFXGGGGXPXXXGXXXPPPPXKKXXGVX 364
F G GG G P ++ F+ PP GGGG P PP G
Sbjct: 124 FGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGP 183
Query: 363 XXRGXXPPPQXFGG 322
G P GG
Sbjct: 184 PGHGGQGGPPGHGG 197
Score = 29.5 bits (63), Expect = 4.7
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -3
Query: 525 GGGXXPXXXXXXKKKXXXXFSXGXPPXFXGGGGXPXXXGXXXPPP 391
GGG P G PP G GG P G PPP
Sbjct: 159 GGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPP 203
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.1 bits (67), Expect = 1.5
Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
Frame = -3
Query: 540 FXGGGGGGXXPXXXXXXKKKXXXXFSXGX-PPXFXGGGGXPXXXGXXXPPPPXKKXXGVX 364
F G GG G P ++ F+ PP GGGG P PP G
Sbjct: 404 FGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGP 463
Query: 363 XXRGXXPPPQXFGG 322
G P GG
Sbjct: 464 PGHGGQGGPPGHGG 477
Score = 29.5 bits (63), Expect = 4.7
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -3
Query: 525 GGGXXPXXXXXXKKKXXXXFSXGXPPXFXGGGGXPXXXGXXXPPP 391
GGG P G PP G GG P G PPP
Sbjct: 439 GGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPP 483
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = +1
Query: 322 PPKXLGGGXXPPXXXNPXXFFXGGGGGXXPPXXXGPPXPXKXGGAP 459
PP+ G G PP P GGGGG PP P GAP
Sbjct: 782 PPRG-GPGAPPPPGMRPPPGAPGGGGGMYPPLIP-TRVPTPSNGAP 825
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 26.6 bits (56), Expect(2) = 1.9
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 518 PPPPPPXKXXGXXXXXXPXGG 580
PPPPPP G P GG
Sbjct: 65 PPPPPPAPIGGGAGYAAPFGG 85
Score = 22.6 bits (46), Expect(2) = 1.9
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Frame = +2
Query: 338 GGGXXPLFXKTPSXFLXGGGGXXX---PXXXGXPPPP 439
GGG P + S + GGGG P PPPP
Sbjct: 36 GGGAPPC---SSSSYATGGGGGSYAAAPALPPPPPPP 69
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 26.6 bits (56), Expect(2) = 2.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 518 PPPPPPXKXXGXXXXXXPXGG 580
PPPPPP G P GG
Sbjct: 65 PPPPPPAPIGGGAGYAAPFGG 85
Score = 22.6 bits (46), Expect(2) = 2.0
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Frame = +2
Query: 338 GGGXXPLFXKTPSXFLXGGGGXXX---PXXXGXPPPP 439
GGG P + S + GGGG P PPPP
Sbjct: 36 GGGAPPC---SSSSYATGGGGGSYAAAPALPPPPPPP 69
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.7 bits (66), Expect = 2.0
Identities = 31/133 (23%), Positives = 31/133 (23%), Gaps = 5/133 (3%)
Frame = +1
Query: 322 PPKXLGGGXXPPXXXNPXXFFXGGGGGXX----PPXXXGPPXPXKXGGAPXXKXXXXFFF 489
PP G G PP G G PP G P P G
Sbjct: 97 PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASR 156
Query: 490 SXPXXX-GXGPPPPPPXKXXGXXXXXXPXXGXXXXXXXXXXXXXPPPPXGXXXXXXXXXX 666
P G G PPPPP PPPP G
Sbjct: 157 RPPPPPKGTGSPPPPP-TGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGY 215
Query: 667 XXXXXXPPPXXXG 705
PPP G
Sbjct: 216 ASRRPPPPPKGTG 228
Score = 29.5 bits (63), Expect = 4.7
Identities = 24/104 (23%), Positives = 25/104 (24%)
Frame = +1
Query: 394 GGGXXPPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPPXKXXGXXXXXXPX 573
G G PP G P G + P G G PPPPP
Sbjct: 39 GTGTPPPPPTGEPQDLSGEGNASRRPP-------PPPKGTGTPPPPPTGEPQDLSAEEGN 91
Query: 574 XGXXXXXXXXXXXXXPPPPXGXXXXXXXXXXXXXXXXPPPXXXG 705
PPPP G PPP G
Sbjct: 92 ASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTG 135
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.5 bits (63), Expect = 4.7
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +1
Query: 337 GGGXXPPXXXNPXXFFXGGGGGXXPPXXXGPP-XPXKXGGAPXXK 468
GGG P GGGGG P PP P K G P K
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPRK 659
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 459 GXPPXFXGGGGXPXXXGXXXPPPPXKKXXGVXXXRGXXP 343
G PP GGGG G PP P K G + P
Sbjct: 625 GGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPRKSISP 663
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.5 bits (63), Expect = 4.7
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +1
Query: 337 GGGXXPPXXXNPXXFFXGGGGGXXPPXXXGPP-XPXKXGGAPXXK 468
GGG P GGGGG P PP P K G P K
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPRK 659
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 459 GXPPXFXGGGGXPXXXGXXXPPPPXKKXXGVXXXRGXXP 343
G PP GGGG G PP P K G + P
Sbjct: 625 GGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPRKSISP 663
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 4.7
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 6/77 (7%)
Frame = +3
Query: 369 PXPLFXXG--GGGXPPPXXXGX----PXPXKKXGGXXXKKXXXFFFFXXXXXGGGXPPPP 530
P P+F G G PPP G P GG F G G PPPP
Sbjct: 743 PPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSF--RGGRGGHGGPPPP 800
Query: 531 PXXXXXGGXXXXXPXGG 581
GG P G
Sbjct: 801 HFDRRGGGGPPFRPENG 817
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 409 PPXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPP 534
PP G P GG P + P G GPPPPPP
Sbjct: 65 PPGPHGMPF---MGGPPPHHQ---YHLQYPPPHGLGPPPPPP 100
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 6.2
Identities = 19/63 (30%), Positives = 21/63 (33%)
Frame = -2
Query: 580 PPXGXXXXXPPXXFXXGGGGGXPPPKXXXXKKKXXXXFFXWXPPXFXXGXGXPXXXGGGX 401
PP G PP G GG PPP+ + PP P GG
Sbjct: 1554 PPMGGLP--PPHGGMNGWRGGPPPPR-GGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGP 1610
Query: 400 PPP 392
PPP
Sbjct: 1611 PPP 1613
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 8.2
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +1
Query: 412 PXXXGPPXPXKXGGAPXXKXXXXFFFSXPXXXGXGPPPPPPXKXXG 549
P PP P GAP P G PPPPPP G
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPP-----PMLGGPPPPPPPPGGLMG 601
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 24.2 bits (50), Expect(2) = 8.9
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +2
Query: 518 PPPPPPXKXXGXXXXXXPXGG 580
PPPPPP + G GG
Sbjct: 535 PPPPPPPRSSGANGNRNGGGG 555
Score = 22.6 bits (46), Expect(2) = 8.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 509 GXXPPPPPP 535
G PPPPPP
Sbjct: 533 GPPPPPPPP 541
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,773,996
Number of Sequences: 27780
Number of extensions: 358760
Number of successful extensions: 3163
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1634
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3151206316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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