Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_L11
         (916 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    29   5.2  
05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938     29   6.8  
04_01_0080 - 889548-889892                                             28   9.0  

>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 456 FFFXXFFFFXFXXFFFX*VLQTDI 385
           FFF  FFFF F  FFF      D+
Sbjct: 89  FFFFFFFFFFFFFFFFFFFFSGDV 112



 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 456 FFFXXFFFFXFXXFFF 409
           FFF  FFFF F  FFF
Sbjct: 87  FFFFFFFFFFFFFFFF 102



 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 456 FFFXXFFFFXFXXFFF 409
           FFF  FFFF F  FFF
Sbjct: 88  FFFFFFFFFFFFFFFF 103



 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -1

Query: 454 FFXFXFFFXFXXFFFXXSTTNRHSNF 377
           FF F FFF F  FFF       H +F
Sbjct: 94  FFFFFFFFFFFFFFFSGDVYCGHRHF 119


>05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938
          Length = 331

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 456 FFFXXFFFFXFXXFFF 409
           FFF  FFFF F  FFF
Sbjct: 62  FFFFFFFFFFFFFFFF 77



 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 456 FFFXXFFFFXFXXFFF 409
           FFF  FFFF F  FFF
Sbjct: 63  FFFFFFFFFFFFFFFF 78



 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 456 FFFXXFFFFXFXXFFF 409
           FFF  FFFF F  FFF
Sbjct: 64  FFFFFFFFFFFFFFFF 79



 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 456 FFFXXFFFFXFXXFFF 409
           FFF  FFFF F  FFF
Sbjct: 65  FFFFFFFFFFFFFFFF 80



 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 456 FFFXXFFFFXFXXFFF 409
           FFF  FFFF F  FFF
Sbjct: 66  FFFFFFFFFFFFFFFF 81



 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 456 FFFXXFFFFXFXXFFF 409
           FFF  FFFF F  FFF
Sbjct: 67  FFFFFFFFFFFFFFFF 82



 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 456 FFFXXFFFFXFXXFFF 409
           FFF  FFFF F  FFF
Sbjct: 68  FFFFFFFFFFFFFFFF 83



 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 456 FFFXXFFFFXFXXFFF 409
           FFF  FFFF F  FFF
Sbjct: 69  FFFFFFFFFFFFFFFF 84



 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 456 FFFXXFFFFXFXXFFF 409
           FFF  FFFF F  FFF
Sbjct: 70  FFFFFFFFFFFFFFFF 85



 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 456 FFFXXFFFFXFXXFFF 409
           FFF  FFFF F  FFF
Sbjct: 71  FFFFFFFFFFFFFFFF 86


>04_01_0080 - 889548-889892
          Length = 114

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 6/20 (30%), Positives = 16/20 (80%)
 Frame = -2

Query: 366 IDLHNFINIQIPVHICQFSC 307
           +D+H+++N+ + + +C+F C
Sbjct: 84  VDIHDYLNLALHMQLCRFGC 103


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,764,087
Number of Sequences: 37544
Number of extensions: 176153
Number of successful extensions: 691
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)