Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_L10
         (891 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical pr...   226   2e-59

>Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical
           protein T05E11.1 protein.
          Length = 210

 Score =  226 bits (552), Expect = 2e-59
 Identities = 107/134 (79%), Positives = 117/134 (87%)
 Frame = +3

Query: 195 AADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVE 374
           A + PE+ LFG+WS   V VSD+SL DYI VKEK AKYLPHSAGR+  +RFRKA CPIVE
Sbjct: 17  ATEAPEVALFGKWSLQSVNVSDISLVDYIPVKEKSAKYLPHSAGRFQVRRFRKAACPIVE 76

Query: 375 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGR 554
           RL NSLMMHGRNNGKKLM VRIVKHAFEII+LLTGENP+QVLV A+INSGPREDSTRIGR
Sbjct: 77  RLANSLMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENPVQVLVNAVINSGPREDSTRIGR 136

Query: 555 AGTVRRXAVDVSPL 596
           AGTVRR AVDV+PL
Sbjct: 137 AGTVRRQAVDVAPL 150



 Score =  100 bits (240), Expect = 1e-21
 Identities = 49/62 (79%), Positives = 51/62 (82%)
 Frame = +1

Query: 592 PXRRVNQAIWLLCTGAREAAFXXIKTXAXCVAXELINAAKGSSNSYAIXXKDXLXRVAKS 771
           P RRVNQAIWLLCTGAREAAF  +KT A C+A ELINAAKGSSNSYAI  KD L RVAKS
Sbjct: 149 PLRRVNQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSSNSYAIKKKDELERVAKS 208

Query: 772 XR 777
            R
Sbjct: 209 NR 210


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,598,925
Number of Sequences: 27780
Number of extensions: 338627
Number of successful extensions: 781
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)