Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_L09
(900 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 36 0.052
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.5
U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-li... 31 1.5
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.5
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 7.9
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 28 7.9
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 35.5 bits (78), Expect = 0.052
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +1
Query: 736 PFSXXTPVXXPTSXCXSXPXXPGPXXPQPPXXPPXXXPLXPXXXPP 873
P + P+ P C P P P PP PP P P PP
Sbjct: 40 PCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPP 85
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +1
Query: 718 PSGSVAPFSXXTPVXXPTSXCXSXPXXPGPXXPQPPXXPPXXXPLXPXXXP 870
P + P PV P C + P P P PP PP P P P
Sbjct: 40 PCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICP-PPPPPPMPCPPPPPPMP 89
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +1
Query: 718 PSGSVAPFSXXTPVXXPTSXCXSXPXXPGPXXPQPPXXPPXXXPLXPXXXP 870
P + P P P C P P P P PP P P P P
Sbjct: 36 PMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 766 PTSXCXSXPXXPGPXXPQPPXXPPXXXPLXPXXXPP 873
P C P P P PP PP P P PP
Sbjct: 41 PPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPP 76
>U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-like
protein protein32 protein.
Length = 105
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 887 GXXXXGGXXXGXRGXXXGGXXGGWGXXGPGW 795
G GG G G GG GGWG G GW
Sbjct: 57 GWGGRGGWGRGG-GRGYGGRGGGWGGRGGGW 86
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = +1
Query: 718 PSGSVAPFSXXTPVXXPTSXCXSXPXXP--GPXXPQPPXXPPXXXPLXPXXXPPXXXXP 888
PS + AP T V PTS P P GP P P P P P PP P
Sbjct: 689 PSDTPAP---STSVPPPTSVQPPQPQQPPQGPPGPPGPQQHPGPYPGYPGYGPPGAMRP 744
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/54 (29%), Positives = 18/54 (33%), Gaps = 3/54 (5%)
Frame = +1
Query: 718 PSGSVAPFSXXTPVXXP---TSXCXSXPXXPGPXXPQPPXXPPXXXPLXPXXXP 870
PS S P+ P+ P S C P P P PP P P P
Sbjct: 76 PSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTP 129
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 718 PSGSVAPFSXXTPVXXPTSXCXSXPXXPGPXXPQPPXXPPXXXP 849
P G AP S P P P PG P P PP P
Sbjct: 414 PGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAP 457
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = +1
Query: 718 PSGSVAPFSXXTPVXXPTSXCXSXPXXPGPXXPQPPXXPPXXXPLXPXXXPPXXXXP 888
P AP TP P C P PQ P PP + PP P
Sbjct: 107 PGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGPPGQPGIPGDNGPPGEQGP 163
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 792 PPXWAXXXPTPPXPPXPXPP 851
PP + P PP PP P PP
Sbjct: 349 PPIISPPAPPPPPPPPPPPP 368
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = +3
Query: 660 SCALLFRPLPLTGXLSAXXPFXKRGPFLIXHAXXXPHXXXXVXXPPXWAXXXPTPPXPPX 839
SC L P P P P L + P PP W PP PP
Sbjct: 98 SCCLPGPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPWKPCPQGPPGPPG 157
Query: 840 PXPP 851
P P
Sbjct: 158 PPGP 161
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,698,239
Number of Sequences: 27780
Number of extensions: 265927
Number of successful extensions: 1353
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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