Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_L03
(1108 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 0.010
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 0.020
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 0.020
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 0.020
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 0.13
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 0.13
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 0.28
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 31 1.9
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 25 2.3
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 25 2.6
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 25 2.6
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 25 2.9
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 25 3.5
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 25 3.5
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 25 3.5
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 25 3.5
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 29 4.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 4.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 4.5
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 29 4.5
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 29 4.5
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 4.5
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 4.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 24 4.9
AF067622-1|AAC17543.2| 366|Caenorhabditis elegans Hypothetical ... 25 5.3
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 25 5.8
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 5.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 7.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 7.8
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.5 bits (63), Expect(2) = 0.010
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 528 PPPPPPPPXXGXXXXKK 578
PPPPPPPP G +K
Sbjct: 53 PPPPPPPPMCGCGCGRK 69
Score = 27.9 bits (59), Expect(2) = 0.010
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 516 GXXXPPPPPPPP 551
G PPPPPPPP
Sbjct: 48 GCAPPPPPPPPP 59
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect(2) = 0.020
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 528 PPPPPPPPXXG 560
PPPPPPPP G
Sbjct: 769 PPPPPPPPPGG 779
Score = 27.9 bits (59), Expect(2) = 0.020
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 516 GXXXPPPPPPPP 551
G PPPPPPPP
Sbjct: 766 GGCPPPPPPPPP 777
Score = 25.4 bits (53), Expect(2) = 1.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 531 PPPPPPPXXG 560
PPPPPPP G
Sbjct: 758 PPPPPPPPGG 767
Score = 23.8 bits (49), Expect(2) = 1.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 528 PPPPPPP 548
PPPPPPP
Sbjct: 726 PPPPPPP 732
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect(2) = 0.020
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 528 PPPPPPPPXXG 560
PPPPPPPP G
Sbjct: 769 PPPPPPPPPGG 779
Score = 27.9 bits (59), Expect(2) = 0.020
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 516 GXXXPPPPPPPP 551
G PPPPPPPP
Sbjct: 766 GGCPPPPPPPPP 777
Score = 25.4 bits (53), Expect(2) = 1.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 531 PPPPPPPXXG 560
PPPPPPP G
Sbjct: 758 PPPPPPPPGG 767
Score = 23.8 bits (49), Expect(2) = 1.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 528 PPPPPPP 548
PPPPPPP
Sbjct: 726 PPPPPPP 732
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect(2) = 0.020
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 528 PPPPPPPPXXG 560
PPPPPPPP G
Sbjct: 352 PPPPPPPPPGG 362
Score = 27.9 bits (59), Expect(2) = 0.020
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 516 GXXXPPPPPPPP 551
G PPPPPPPP
Sbjct: 349 GGCPPPPPPPPP 360
Score = 25.4 bits (53), Expect(2) = 1.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 531 PPPPPPPXXG 560
PPPPPPP G
Sbjct: 341 PPPPPPPPGG 350
Score = 23.8 bits (49), Expect(2) = 4.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 528 PPPPPPP 548
PPPPPPP
Sbjct: 309 PPPPPPP 315
Score = 23.8 bits (49), Expect(2) = 1.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 528 PPPPPPP 548
PPPPPPP
Sbjct: 325 PPPPPPP 331
Score = 23.8 bits (49), Expect(2) = 4.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 531 PPPPPPP 551
PPPPPPP
Sbjct: 325 PPPPPPP 331
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.3 bits (60), Expect(2) = 0.13
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 528 PPPPPPPPXXG 560
PPPPPPPP G
Sbjct: 808 PPPPPPPPPGG 818
Score = 25.0 bits (52), Expect(2) = 0.13
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 516 GXXXPPPPPPP 548
G PPPPPPP
Sbjct: 806 GAPPPPPPPPP 816
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.3 bits (60), Expect(2) = 0.13
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 528 PPPPPPPPXXG 560
PPPPPPPP G
Sbjct: 808 PPPPPPPPPGG 818
Score = 25.0 bits (52), Expect(2) = 0.13
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 516 GXXXPPPPPPP 548
G PPPPPPP
Sbjct: 806 GAPPPPPPPPP 816
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect(2) = 0.28
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 528 PPPPPPPPXXG 560
PPPPPPPP G
Sbjct: 577 PPPPPPPPMLG 587
Score = 26.6 bits (56), Expect(2) = 0.28
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 528 PPPPPPPP 551
PPPPPPPP
Sbjct: 576 PPPPPPPP 583
Score = 25.4 bits (53), Expect(2) = 0.28
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 531 PPPPPPPXXG 560
PPPPPPP G
Sbjct: 589 PPPPPPPPGG 598
Score = 23.8 bits (49), Expect(2) = 0.28
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 516 GXXXPPPPPPPP 551
G P PPPPPP
Sbjct: 555 GTNVPIPPPPPP 566
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 1.1
Identities = 27/110 (24%), Positives = 27/110 (24%)
Frame = -1
Query: 856 GGGGXXXXXXXXXXXXXXGXXXXGGXXXPPPPPPXXXXXXXXXXGXXXXVVVXXXXXXXG 677
GGGG G GG PPPPPP G G
Sbjct: 26 GGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGG---GGGGCGGG 82
Query: 676 XXXXXXXGGXGXXXXXXXXXXXXXXXXXXXPPXFXXXXXPXXGGGGGGGG 527
GG G PP GGGG GGG
Sbjct: 83 GGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGG 132
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 516 GXXXPPPPPPPPXXGXXXXKK 578
G PPPPPPPP G K+
Sbjct: 62 GCGIPPPPPPPPQCGCGRKKR 82
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 25.4 bits (53), Expect(2) = 2.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 531 PPPPPPPXXG 560
PPPPPPP G
Sbjct: 331 PPPPPPPIGG 340
Score = 23.4 bits (48), Expect(2) = 2.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 528 PPPPPPPP 551
PP PPPPP
Sbjct: 328 PPAPPPPP 335
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 24.6 bits (51), Expect(2) = 2.6
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 516 GXXXPPPPPPPP 551
G PPPPPPP
Sbjct: 26 GCGCAPPPPPPP 37
Score = 24.2 bits (50), Expect(2) = 2.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 528 PPPPPPPPXXG 560
PPPPPPP G
Sbjct: 31 PPPPPPPCGCG 41
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 24.6 bits (51), Expect(2) = 2.6
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 516 GXXXPPPPPPPP 551
G PPPPPPP
Sbjct: 26 GCGCAPPPPPPP 37
Score = 24.2 bits (50), Expect(2) = 2.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 528 PPPPPPPPXXG 560
PPPPPPP G
Sbjct: 31 PPPPPPPCGCG 41
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 24.6 bits (51), Expect(2) = 2.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 516 GXXXPPPPPPPP 551
G PPPPPPP
Sbjct: 26 GCGCAPPPPPPP 37
Score = 24.2 bits (50), Expect(2) = 2.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 528 PPPPPPPPXXG 560
PPPPPPP G
Sbjct: 31 PPPPPPPCGCG 41
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 25.0 bits (52), Expect(2) = 3.5
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1
Query: 550 GGGGGGGGXXXP 515
GGGGGGGG P
Sbjct: 337 GGGGGGGGGLDP 348
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 559 PXXGGGGGGG 530
P GGGGGGG
Sbjct: 336 PGGGGGGGGG 345
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 25.0 bits (52), Expect(2) = 3.5
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1
Query: 550 GGGGGGGGXXXP 515
GGGGGGGG P
Sbjct: 337 GGGGGGGGGLDP 348
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 559 PXXGGGGGGG 530
P GGGGGGG
Sbjct: 336 PGGGGGGGGG 345
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 25.0 bits (52), Expect(2) = 3.5
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1
Query: 550 GGGGGGGGXXXP 515
GGGGGGGG P
Sbjct: 337 GGGGGGGGGLDP 348
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 559 PXXGGGGGGG 530
P GGGGGGG
Sbjct: 336 PGGGGGGGGG 345
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 25.0 bits (52), Expect(2) = 3.5
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1
Query: 550 GGGGGGGGXXXP 515
GGGGGGGG P
Sbjct: 337 GGGGGGGGGLDP 348
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 559 PXXGGGGGGG 530
P GGGGGGG
Sbjct: 336 PGGGGGGGGG 345
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 528 PPPPPPPPXXGXXXXKKXGG 587
PPPPPPPP + GG
Sbjct: 534 PPPPPPPPRSSGANGNRNGG 553
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 516 GXXXPPPPPPPPXXG 560
G PPPPPPPP G
Sbjct: 645 GAGAPPPPPPPPPSG 659
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 516 GXXXPPPPPPPPXXG 560
G PPPPPPPP G
Sbjct: 471 GAGAPPPPPPPPPSG 485
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 516 GXXXPPPPPPPPXXG 560
G PPPPPPPP G
Sbjct: 61 GYGAPPPPPPPPAFG 75
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 516 GXXXPPPPPPPPXXG 560
G PPPPPPPP G
Sbjct: 61 GYGAPPPPPPPPAFG 75
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 516 GXXXPPPPPPPPXXG 560
G PPPPPPPP G
Sbjct: 61 GYGAPPPPPPPPAFG 75
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 516 GXXXPPPPPPPPXXG 560
G PPPPPPPP G
Sbjct: 670 GGFMPPPPPPPPMPG 684
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 516 GXXXPPPPPPPPXXG 560
G PPPPPPPP G
Sbjct: 670 GGFMPPPPPPPPMPG 684
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 23.8 bits (49), Expect(2) = 4.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 528 PPPPPPP 548
PPPPPPP
Sbjct: 122 PPPPPPP 128
Score = 23.8 bits (49), Expect(2) = 4.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 531 PPPPPPP 551
PPPPPPP
Sbjct: 138 PPPPPPP 144
>AF067622-1|AAC17543.2| 366|Caenorhabditis elegans Hypothetical
protein F33E11.2 protein.
Length = 366
Score = 25.0 bits (52), Expect(2) = 5.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 516 GXXXPPPPPPP 548
G PPPPPPP
Sbjct: 236 GILAPPPPPPP 246
Score = 22.6 bits (46), Expect(2) = 5.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 528 PPPPPPPP 551
PPPPPP P
Sbjct: 241 PPPPPPLP 248
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 25.0 bits (52), Expect(2) = 5.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 586 PPXFXXXXXPXXGGGGGGG 530
PP F GGGGGGG
Sbjct: 70 PPPFDGGYNRPYGGGGGGG 88
Score = 22.6 bits (46), Expect(2) = 5.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 547 GGGGGGGXXXP 515
GGGGGGG P
Sbjct: 82 GGGGGGGYGRP 92
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 5.9
Identities = 18/56 (32%), Positives = 20/56 (35%)
Frame = +2
Query: 71 TWXXPXGGKXXFXTRXPLGXX*PGGXXPFXXXFGXFGNXPPXLFXXPGXKXXXRGP 238
++ P GG F P G PG P F G PP PG RGP
Sbjct: 422 SYGPPQGGPGGFGPPPPGG---PGAYGPPPTGFPPVGAPPPGAAGAPGGNPFARGP 474
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 7.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 528 PPPPPPPPXXGXXXXKKXGG 587
PPPPPPPP GG
Sbjct: 303 PPPPPPPPPPAPAPVSSGGG 322
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 7.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 528 PPPPPPPPXXGXXXXKKXGG 587
PPPPPPPP GG
Sbjct: 303 PPPPPPPPPPAPAPVSSGGG 322
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,795,881
Number of Sequences: 27780
Number of extensions: 213862
Number of successful extensions: 4189
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3105
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2992200068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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