Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_K24
         (1227 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0907 + 7001946-7002050,7002389-7002476,7002606-7002679,700...    35   0.11 
05_06_0061 + 25274693-25274794,25274982-25275069,25275186-252752...    35   0.11 
02_05_1357 + 35899480-35899578,35900247-35900334,35900438-359005...    35   0.11 
02_05_0708 - 31103246-31103359,31104146-31104178,31104297-311043...    35   0.11 
02_02_0624 - 12323702-12323777,12324219-12324304,12324360-123244...    35   0.11 
02_01_0155 - 1080923-1081024,1081111-1081176,1081306-1081370,108...    35   0.11 
01_01_0909 - 7163886-7163931,7164148-7164254,7164370-7164435,716...    35   0.11 

>06_01_0907 +
           7001946-7002050,7002389-7002476,7002606-7002679,
           7002829-7002892,7004355-7004419,7004557-7004622,
           7004725-7004757,7004968-7005045,7005295-7005303
          Length = 193

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +2

Query: 284 IKCVVVGDGAVGKTC 328
           IKCV VGDGAVGKTC
Sbjct: 9   IKCVTVGDGAVGKTC 23


>05_06_0061 +
           25274693-25274794,25274982-25275069,25275186-25275295,
           25275542-25275605,25275713-25275777,25275864-25275929,
           25276084-25276199,25276382-25276415
          Length = 214

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +2

Query: 284 IKCVVVGDGAVGKTC 328
           IKCV VGDGAVGKTC
Sbjct: 8   IKCVTVGDGAVGKTC 22


>02_05_1357 +
           35899480-35899578,35900247-35900334,35900438-35900592,
           35900652-35900715,35902910-35902974,35903061-35903126,
           35903644-35903745
          Length = 212

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +2

Query: 284 IKCVVVGDGAVGKTC 328
           IKCV VGDGAVGKTC
Sbjct: 7   IKCVTVGDGAVGKTC 21


>02_05_0708 -
           31103246-31103359,31104146-31104178,31104297-31104362,
           31104532-31104596,31105456-31105519,31105629-31105738,
           31105886-31105973,31106328-31106432
          Length = 214

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +2

Query: 284 IKCVVVGDGAVGKTC 328
           IKCV VGDGAVGKTC
Sbjct: 9   IKCVTVGDGAVGKTC 23


>02_02_0624 -
           12323702-12323777,12324219-12324304,12324360-12324425,
           12324650-12324762,12324793-12324856,12324950-12325059,
           12325473-12325560,12325651-12325749
          Length = 233

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +2

Query: 284 IKCVVVGDGAVGKTC 328
           IKCV VGDGAVGKTC
Sbjct: 7   IKCVTVGDGAVGKTC 21


>02_01_0155 -
           1080923-1081024,1081111-1081176,1081306-1081370,
           1081938-1082001,1082359-1082507,1082591-1082678,
           1083757-1083855
          Length = 210

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +2

Query: 284 IKCVVVGDGAVGKTC 328
           IKCV VGDGAVGKTC
Sbjct: 7   IKCVTVGDGAVGKTC 21


>01_01_0909 -
           7163886-7163931,7164148-7164254,7164370-7164435,
           7164720-7164784,7164937-7165000,7165685-7165794,
           7165972-7166059,7166100-7166297
          Length = 247

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +2

Query: 284 IKCVVVGDGAVGKTC 328
           IKCV VGDGAVGKTC
Sbjct: 11  IKCVTVGDGAVGKTC 25


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,235,391
Number of Sequences: 37544
Number of extensions: 124950
Number of successful extensions: 235
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3771247248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)