Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_K24
(1227 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 40 0.003
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 40 0.003
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 38 0.011
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 38 0.011
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 38 0.011
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 38 0.011
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 38 0.011
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 38 0.011
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 38 0.011
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 38 0.011
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 36 0.077
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 35 0.10
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 35 0.10
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 29 8.9
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 29 8.9
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 275 MXTIKCVVVGDGAVGKTC 328
M TIKCVVVGDGAVGKTC
Sbjct: 1 MQTIKCVVVGDGAVGKTC 18
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 275 MXTIKCVVVGDGAVGKTC 328
M TIKCVVVGDGAVGKTC
Sbjct: 1 MQTIKCVVVGDGAVGKTC 18
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 38.3 bits (85), Expect = 0.011
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2
Query: 275 MXTIKCVVVGDGAVGKTC 328
M IKCVVVGDGAVGKTC
Sbjct: 1 MQAIKCVVVGDGAVGKTC 18
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 38.3 bits (85), Expect = 0.011
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2
Query: 275 MXTIKCVVVGDGAVGKTC 328
M IKCVVVGDGAVGKTC
Sbjct: 1 MQAIKCVVVGDGAVGKTC 18
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 38.3 bits (85), Expect = 0.011
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2
Query: 275 MXTIKCVVVGDGAVGKTC 328
M IKCVVVGDGAVGKTC
Sbjct: 1 MQAIKCVVVGDGAVGKTC 18
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 38.3 bits (85), Expect = 0.011
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2
Query: 275 MXTIKCVVVGDGAVGKTC 328
M IKCVVVGDGAVGKTC
Sbjct: 1 MQAIKCVVVGDGAVGKTC 18
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 38.3 bits (85), Expect = 0.011
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2
Query: 275 MXTIKCVVVGDGAVGKTC 328
M IKCVVVGDGAVGKTC
Sbjct: 1 MQAIKCVVVGDGAVGKTC 18
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 38.3 bits (85), Expect = 0.011
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2
Query: 275 MXTIKCVVVGDGAVGKTC 328
M IKCVVVGDGAVGKTC
Sbjct: 1 MQAIKCVVVGDGAVGKTC 18
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 38.3 bits (85), Expect = 0.011
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2
Query: 275 MXTIKCVVVGDGAVGKTC 328
M IKCVVVGDGAVGKTC
Sbjct: 1 MQAIKCVVVGDGAVGKTC 18
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 38.3 bits (85), Expect = 0.011
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2
Query: 275 MXTIKCVVVGDGAVGKTC 328
M IKCVVVGDGAVGKTC
Sbjct: 1 MQAIKCVVVGDGAVGKTC 18
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 35.5 bits (78), Expect = 0.077
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 284 IKCVVVGDGAVGKTC 328
+KCVVVGDGAVGKTC
Sbjct: 1 MKCVVVGDGAVGKTC 15
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 35.1 bits (77), Expect = 0.10
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 284 IKCVVVGDGAVGKTC 328
IKCVVVGDG VGKTC
Sbjct: 8 IKCVVVGDGTVGKTC 22
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 35.1 bits (77), Expect = 0.10
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 284 IKCVVVGDGAVGKTC 328
IKCVVVGDG VGKTC
Sbjct: 8 IKCVVVGDGTVGKTC 22
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 28.7 bits (61), Expect = 8.9
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2
Query: 287 KCVVVGDGAVGKTC 328
K V+VGDGA GKTC
Sbjct: 7 KLVIVGDGACGKTC 20
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 28.7 bits (61), Expect = 8.9
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2
Query: 287 KCVVVGDGAVGKTC 328
K V+VGDGA GKTC
Sbjct: 7 KLVIVGDGACGKTC 20
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,783,323
Number of Sequences: 27780
Number of extensions: 108515
Number of successful extensions: 238
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3391198850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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