Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_K23
(903 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY865067-2|AAW79466.1| 632|Drosophila melanogaster SR-CI protein. 31 2.2
AY865066-2|AAW79464.1| 632|Drosophila melanogaster SR-CI protein. 31 2.2
AY865062-2|AAW79456.1| 632|Drosophila melanogaster SR-CI protein. 31 2.2
AY864368-1|AAX38006.1| 575|Drosophila melanogaster scavenger re... 31 2.2
AY349704-1|AAQ75563.1| 601|Drosophila melanogaster Sr-CI protein. 31 2.2
AY349701-1|AAQ75560.1| 601|Drosophila melanogaster Sr-CI protein. 31 2.2
X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous ... 30 5.0
X62636-1|CAA44502.1| 326|Drosophila melanogaster hrp36.1 protein. 29 6.6
X54803-1|CAA38574.1| 386|Drosophila melanogaster Hrb87F protein. 29 6.6
X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP pro... 29 8.7
DQ138908-1|ABA86514.1| 1412|Drosophila melanogaster CG11156 prot... 29 8.7
BT012315-1|AAS77440.1| 385|Drosophila melanogaster LD32727p pro... 29 8.7
BT010007-1|AAQ22476.1| 1425|Drosophila melanogaster RE28166p pro... 29 8.7
AY061421-1|AAL28969.1| 300|Drosophila melanogaster LD35248p pro... 29 8.7
AF257463-1|AAG27544.1| 1425|Drosophila melanogaster BRCT-domain ... 29 8.7
AF182826-1|AAF01031.1| 300|Drosophila melanogaster cyclophilin-... 29 8.7
AE014298-1949|AAF48306.1| 1425|Drosophila melanogaster CG11156-P... 29 8.7
AE014297-1716|AAF54967.1| 385|Drosophila melanogaster CG12749-P... 29 8.7
AE014297-1715|AAN13574.1| 325|Drosophila melanogaster CG12749-P... 29 8.7
AE013599-2502|AAF57839.1| 300|Drosophila melanogaster CG4886-PA... 29 8.7
>AY865067-2|AAW79466.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 31.1 bits (67), Expect = 2.2
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +2
Query: 218 PPVTSRGTREWEEGRSSALWDRTTMDYSVKPVTTERFSMMTAVS*PARLTAPGS*DPEVT 397
P T+ T+ R++ TT + KP TT + MT S T+ S P T
Sbjct: 430 PTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPMTTTS-TTFTTSTTSTRPTTT 488
Query: 398 ALTTVDVWTGPTRTHKLPLT*TDKS 472
TT++V+T T +P + T+K+
Sbjct: 489 --TTINVFTTKKTTIMIPTSSTEKT 511
>AY865066-2|AAW79464.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 31.1 bits (67), Expect = 2.2
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +2
Query: 218 PPVTSRGTREWEEGRSSALWDRTTMDYSVKPVTTERFSMMTAVS*PARLTAPGS*DPEVT 397
P T+ T+ R++ TT + KP TT + MT S T+ S P T
Sbjct: 430 PTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPMTTTS-TTFTTSTTSTRPTTT 488
Query: 398 ALTTVDVWTGPTRTHKLPLT*TDKS 472
TT++V+T T +P + T+K+
Sbjct: 489 --TTINVFTTKKTTIMIPTSSTEKT 511
>AY865062-2|AAW79456.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 31.1 bits (67), Expect = 2.2
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +2
Query: 218 PPVTSRGTREWEEGRSSALWDRTTMDYSVKPVTTERFSMMTAVS*PARLTAPGS*DPEVT 397
P T+ T+ R++ TT + KP TT + MT S T+ S P T
Sbjct: 430 PTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPMTTTS-TTFTTSTTSTRPTTT 488
Query: 398 ALTTVDVWTGPTRTHKLPLT*TDKS 472
TT++V+T T +P + T+K+
Sbjct: 489 --TTINVFTTKKTTIMIPTSSTEKT 511
>AY864368-1|AAX38006.1| 575|Drosophila melanogaster scavenger
receptor protein.
Length = 575
Score = 31.1 bits (67), Expect = 2.2
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +2
Query: 218 PPVTSRGTREWEEGRSSALWDRTTMDYSVKPVTTERFSMMTAVS*PARLTAPGS*DPEVT 397
P T+ T+ R++ TT + KP TT + MT S T+ S P T
Sbjct: 373 PTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPMTTTS-TTFTTSTTSTRPTTT 431
Query: 398 ALTTVDVWTGPTRTHKLPLT*TDKS 472
TT++V+T T +P + T+K+
Sbjct: 432 --TTINVFTTKKTTIMIPTSSTEKT 454
>AY349704-1|AAQ75563.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 31.1 bits (67), Expect = 2.2
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +2
Query: 218 PPVTSRGTREWEEGRSSALWDRTTMDYSVKPVTTERFSMMTAVS*PARLTAPGS*DPEVT 397
P T+ T+ R++ TT + KP TT + MT S T+ S P T
Sbjct: 429 PTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPMTTTS-TTFTTSTTSTRPTTT 487
Query: 398 ALTTVDVWTGPTRTHKLPLT*TDKS 472
TT++V+T T +P + T+K+
Sbjct: 488 --TTINVFTTKKTTIMIPTSSTEKT 510
>AY349701-1|AAQ75560.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 31.1 bits (67), Expect = 2.2
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +2
Query: 218 PPVTSRGTREWEEGRSSALWDRTTMDYSVKPVTTERFSMMTAVS*PARLTAPGS*DPEVT 397
P T+ T+ R++ TT + KP TT + MT S T+ S P T
Sbjct: 429 PTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPMTTTS-TTFTTSTTSTRPTTT 487
Query: 398 ALTTVDVWTGPTRTHKLPLT*TDKS 472
TT++V+T T +P + T+K+
Sbjct: 488 --TTINVFTTKKTTIMIPTSSTEKT 510
>X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous
nuclear ribonucleoproteinprotein.
Length = 386
Score = 29.9 bits (64), Expect = 5.0
Identities = 28/102 (27%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Frame = +1
Query: 250 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 423
GG + G GQ D G G G+ + + G G+ G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGRGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 424 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 549
W + N Q GG G G G N++ S GG
Sbjct: 265 WNQQGGTGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNGSWGG 306
>X62636-1|CAA44502.1| 326|Drosophila melanogaster hrp36.1 protein.
Length = 326
Score = 29.5 bits (63), Expect = 6.6
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
Frame = +1
Query: 250 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 423
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 424 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 549
W + N Q GG G G G N++ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNGSWGG 306
>X54803-1|CAA38574.1| 386|Drosophila melanogaster Hrb87F protein.
Length = 386
Score = 29.5 bits (63), Expect = 6.6
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
Frame = +1
Query: 250 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 423
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 424 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 549
W + N Q GG G G G N++ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNGSWGG 306
>X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP
protein) protein.
Length = 386
Score = 29.1 bits (62), Expect = 8.7
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
Frame = +1
Query: 250 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 423
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 424 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 549
W + N Q GG G G G N++ S GG
Sbjct: 265 WNQQGGTGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNGSWGG 306
>DQ138908-1|ABA86514.1| 1412|Drosophila melanogaster CG11156 protein.
Length = 1412
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 185 IPHQRPIFKATPPVTSRGTREWEEGRSSALWDRTTMDYSVKPV 313
+P+ + +A PP S G EEG+S+ +D+ + + S PV
Sbjct: 1068 VPNTQSPIEAAPPRRSDGPTLSEEGQSTINFDKISFEESAVPV 1110
>BT012315-1|AAS77440.1| 385|Drosophila melanogaster LD32727p
protein.
Length = 385
Score = 29.1 bits (62), Expect = 8.7
Identities = 28/102 (27%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Frame = +1
Query: 250 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 423
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 424 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 549
W + N Q GG G G G + N++ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGYG-GGNSNGSWGG 305
>BT010007-1|AAQ22476.1| 1425|Drosophila melanogaster RE28166p protein.
Length = 1425
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 185 IPHQRPIFKATPPVTSRGTREWEEGRSSALWDRTTMDYSVKPV 313
+P+ + +A PP S G EEG+S+ +D+ + + S PV
Sbjct: 1075 VPNTQSPIEAAPPRRSDGPTLSEEGQSTINFDKISFEESAVPV 1117
>AY061421-1|AAL28969.1| 300|Drosophila melanogaster LD35248p
protein.
Length = 300
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 283 NDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGDSTN 405
N++G GK+ Y ++ FND+ L ++GT + G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243
>AF257463-1|AAG27544.1| 1425|Drosophila melanogaster BRCT-domain
protein MUS101 protein.
Length = 1425
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 185 IPHQRPIFKATPPVTSRGTREWEEGRSSALWDRTTMDYSVKPV 313
+P+ + +A PP S G EEG+S+ +D+ + + S PV
Sbjct: 1075 VPNTQSPIEAAPPRRSDGPTLSEEGQSTINFDKISFEESAVPV 1117
>AF182826-1|AAF01031.1| 300|Drosophila melanogaster cyclophilin-33
protein.
Length = 300
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 283 NDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGDSTN 405
N++G GK+ Y ++ FND+ L ++GT + G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243
>AE014298-1949|AAF48306.1| 1425|Drosophila melanogaster CG11156-PA
protein.
Length = 1425
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 185 IPHQRPIFKATPPVTSRGTREWEEGRSSALWDRTTMDYSVKPV 313
+P+ + +A PP S G EEG+S+ +D+ + + S PV
Sbjct: 1075 VPNTQSPIEAAPPRRSDGPTLSEEGQSTINFDKISFEESAVPV 1117
>AE014297-1716|AAF54967.1| 385|Drosophila melanogaster CG12749-PA,
isoform A protein.
Length = 385
Score = 29.1 bits (62), Expect = 8.7
Identities = 28/102 (27%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Frame = +1
Query: 250 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 423
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 424 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 549
W + N Q GG G G G + N++ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGYG-GGNSNGSWGG 305
>AE014297-1715|AAN13574.1| 325|Drosophila melanogaster CG12749-PB,
isoform B protein.
Length = 325
Score = 29.1 bits (62), Expect = 8.7
Identities = 28/102 (27%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Frame = +1
Query: 250 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 423
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 424 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 549
W + N Q GG G G G + N++ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGYG-GGNSNGSWGG 305
>AE013599-2502|AAF57839.1| 300|Drosophila melanogaster CG4886-PA
protein.
Length = 300
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 283 NDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGDSTN 405
N++G GK+ Y ++ FND+ L ++GT + G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,836,224
Number of Sequences: 53049
Number of extensions: 853115
Number of successful extensions: 2205
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2199
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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