Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_K20
(881 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y14330-1|CAA74706.1| 1223|Homo sapiens jagged2 protein protein. 31 4.2
AF111170-2|AAD15562.1| 1238|Homo sapiens Jagged2 protein. 31 4.2
AF029779-1|AAB84216.1| 1200|Homo sapiens hJAG2.del-E6 protein. 31 4.2
AF029778-1|AAB84215.1| 1238|Homo sapiens Jagged2 protein. 31 4.2
AF020201-1|AAB71189.1| 1238|Homo sapiens Jagged 2 protein. 31 4.2
AF003521-1|AAB61285.1| 1238|Homo sapiens Jagged 2 protein. 31 4.2
M69181-1|AAA99177.1| 1976|Homo sapiens non-muscle myosin B protein. 31 7.3
BC117691-1|AAI17692.1| 1976|Homo sapiens myosin, heavy chain 10,... 31 7.3
BC117690-1|AAI17691.1| 1976|Homo sapiens myosin, heavy chain 10,... 31 7.3
BC000280-1|AAH00280.1| 471|Homo sapiens MYH10 protein protein. 31 7.3
AB210026-1|BAE06108.1| 2018|Homo sapiens MYH10 variant protein p... 31 7.3
>Y14330-1|CAA74706.1| 1223|Homo sapiens jagged2 protein protein.
Length = 1223
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +2
Query: 56 CVSNLSKSNKFPCYNXVEACLD--NXFRCRC 142
C N + N PCYN C+D N FRC C
Sbjct: 771 CTHNTNDCNPLPCYNG-GICVDGVNWFRCEC 800
>AF111170-2|AAD15562.1| 1238|Homo sapiens Jagged2 protein.
Length = 1238
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +2
Query: 56 CVSNLSKSNKFPCYNXVEACLD--NXFRCRC 142
C N + N PCYN C+D N FRC C
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCEC 815
>AF029779-1|AAB84216.1| 1200|Homo sapiens hJAG2.del-E6 protein.
Length = 1200
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +2
Query: 56 CVSNLSKSNKFPCYNXVEACLD--NXFRCRC 142
C N + N PCYN C+D N FRC C
Sbjct: 748 CTHNTNDCNPLPCYNG-GICVDGVNWFRCEC 777
>AF029778-1|AAB84215.1| 1238|Homo sapiens Jagged2 protein.
Length = 1238
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +2
Query: 56 CVSNLSKSNKFPCYNXVEACLD--NXFRCRC 142
C N + N PCYN C+D N FRC C
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCEC 815
>AF020201-1|AAB71189.1| 1238|Homo sapiens Jagged 2 protein.
Length = 1238
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +2
Query: 56 CVSNLSKSNKFPCYNXVEACLD--NXFRCRC 142
C N + N PCYN C+D N FRC C
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCEC 815
>AF003521-1|AAB61285.1| 1238|Homo sapiens Jagged 2 protein.
Length = 1238
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +2
Query: 56 CVSNLSKSNKFPCYNXVEACLD--NXFRCRC 142
C N + N PCYN C+D N FRC C
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCEC 815
>M69181-1|AAA99177.1| 1976|Homo sapiens non-muscle myosin B protein.
Length = 1976
Score = 30.7 bits (66), Expect = 7.3
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 231 KQHCVPLETASRXLVDLNVLKTEIEEAKPNGALDEVFKKYCDKSAQLKGCISSVLQGRAS 410
KQ + + + + +DL L+ +IE A N A DEV K+ AQ+K + + RAS
Sbjct: 1610 KQRALAVASKKKMEIDLKDLEAQIEAA--NKARDEVIKQLRKLQAQMKDYQRELEEARAS 1667
>BC117691-1|AAI17692.1| 1976|Homo sapiens myosin, heavy chain 10,
non-muscle protein.
Length = 1976
Score = 30.7 bits (66), Expect = 7.3
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 231 KQHCVPLETASRXLVDLNVLKTEIEEAKPNGALDEVFKKYCDKSAQLKGCISSVLQGRAS 410
KQ + + + + +DL L+ +IE A N A DEV K+ AQ+K + + RAS
Sbjct: 1610 KQRALAVASKKKMEIDLKDLEAQIEAA--NKARDEVIKQLRKLQAQMKDYQRELEEARAS 1667
>BC117690-1|AAI17691.1| 1976|Homo sapiens myosin, heavy chain 10,
non-muscle protein.
Length = 1976
Score = 30.7 bits (66), Expect = 7.3
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 231 KQHCVPLETASRXLVDLNVLKTEIEEAKPNGALDEVFKKYCDKSAQLKGCISSVLQGRAS 410
KQ + + + + +DL L+ +IE A N A DEV K+ AQ+K + + RAS
Sbjct: 1610 KQRALAVASKKKMEIDLKDLEAQIEAA--NKARDEVIKQLRKLQAQMKDYQRELEEARAS 1667
>BC000280-1|AAH00280.1| 471|Homo sapiens MYH10 protein protein.
Length = 471
Score = 30.7 bits (66), Expect = 7.3
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 231 KQHCVPLETASRXLVDLNVLKTEIEEAKPNGALDEVFKKYCDKSAQLKGCISSVLQGRAS 410
KQ + + + + +DL L+ +IE A N A DEV K+ AQ+K + + RAS
Sbjct: 105 KQRALAVASKKKMEIDLKDLEAQIEAA--NKARDEVIKQLRKLQAQMKDYQRELEEARAS 162
>AB210026-1|BAE06108.1| 2018|Homo sapiens MYH10 variant protein
protein.
Length = 2018
Score = 30.7 bits (66), Expect = 7.3
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 231 KQHCVPLETASRXLVDLNVLKTEIEEAKPNGALDEVFKKYCDKSAQLKGCISSVLQGRAS 410
KQ + + + + +DL L+ +IE A N A DEV K+ AQ+K + + RAS
Sbjct: 1652 KQRALAVASKKKMEIDLKDLEAQIEAA--NKARDEVIKQLRKLQAQMKDYQRELEEARAS 1709
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,269,306
Number of Sequences: 237096
Number of extensions: 1846449
Number of successful extensions: 11787
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11787
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -