Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_K16
         (865 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0343 - 20437780-20438009,20438576-20438666                       31   1.6  
08_02_0604 - 19215017-19215101,19215870-19216021,19216591-192166...    29   3.6  
12_02_1179 - 26720533-26721021,26721329-26722597                       28   8.4  
06_01_0432 - 3073380-3074474,3075922-3075989,3076467-3076773           28   8.4  
04_04_0111 - 22842337-22842648,22843008-22843402,22843732-228440...    28   8.4  

>05_04_0343 - 20437780-20438009,20438576-20438666
          Length = 106

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +2

Query: 200 KNSNSQGSNTSAANAIALGAMAVVAVGTFLFTWWKERKVPHRTELKARI 346
           K + S+G        + LG  AVV +  FLF +W+++K   R E  AR+
Sbjct: 43  KKAQSKGHTGRTVLIVLLGIGAVVLLSFFLFKYWQKKK---REEQHARL 88


>08_02_0604 -
           19215017-19215101,19215870-19216021,19216591-19216614,
           19216656-19216884,19217061-19217177,19219249-19219311,
           19219887-19220125
          Length = 302

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
 Frame = +2

Query: 239 NAIALGAM---AVVAVGTFLFTWWKERKVPHRT 328
           N I +G++   A+V VG +LF W K R++P ++
Sbjct: 269 NDITIGSLLGTALVIVGLYLFLWAKAREIPKKS 301


>12_02_1179 - 26720533-26721021,26721329-26722597
          Length = 585

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/51 (25%), Positives = 22/51 (43%)
 Frame = +2

Query: 170 PQINCHFAMTKNSNSQGSNTSAANAIALGAMAVVAVGTFLFTWWKERKVPH 322
           P   C     K +  +  N + ++      + VVA+    F WWK+ K P+
Sbjct: 531 PCQECQAVNEKKTGGKKRNANRSHYPVFLFVFVVAIIALFFPWWKDYKEPY 581


>06_01_0432 - 3073380-3074474,3075922-3075989,3076467-3076773
          Length = 489

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +3

Query: 297 GGKKGRFPTARSSRRESXKIVA--XXSAAXKXFXSPK*YLRVPACVY 431
           GGK  R PTA+  RR   ++ A      A   F      LR+PA V+
Sbjct: 316 GGKTSRIPTAKELRRSGVRLEAGVEDGRAVVQFKEDAATLRLPALVF 362


>04_04_0111 -
           22842337-22842648,22843008-22843402,22843732-22844073,
           22844154-22844282,22844402-22844514,22844596-22844667,
           22844783-22844859,22844978-22845052,22845058-22845121,
           22845332-22845403,22845496-22845628,22846859-22846961
          Length = 628

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +2

Query: 212 SQG-SNTSA-ANAIALGAMAVVAVGTFLFTWWKERK 313
           SQG S T A A  +A  A  + AV    F WW+ RK
Sbjct: 235 SQGDSKTGAIAGGVAAAAALLFAVPAIGFAWWRRRK 270


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,420,285
Number of Sequences: 37544
Number of extensions: 217933
Number of successful extensions: 482
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)