Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_K08
(866 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 41 0.001
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 41 0.001
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 41 0.001
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.012
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.012
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.012
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 27 0.017
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 27 0.018
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 36 0.050
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 1.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.5
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 24 3.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.7
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 5.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.7
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 5.7
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 5.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 5.7
AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi dom... 29 5.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 7.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 7.5
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 7.5
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 28 7.5
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 9.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 41.1 bits (92), Expect = 0.001
Identities = 29/95 (30%), Positives = 31/95 (32%)
Frame = +1
Query: 235 PXPEKKIFNPPXPXGXGGXSLXKIXGRXXPPREKKXGPXXGGGGGXXXXPPXGXFFXXXX 414
P P K + P G +L I G PP P GG PP G
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPP--PGLPPITGG---PPPPPPPGGLPPITG 740
Query: 415 XXXPXPPFFXGXPXXXNXXPPXHXXXGXXPPPPPP 519
P PP P PP G PPPPPP
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/74 (29%), Positives = 22/74 (29%)
Frame = +3
Query: 309 GAXXPPPGKKKXTPXXGGGGXXXXPPXGGFFXXXXXXXXXPXXFXGXPXXXKXXPPXPXX 488
G PPP P GG PP GG P G P PP P
Sbjct: 724 GGPPPPPPPGGLPPITGG--PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP--PPPPGG 779
Query: 489 XGXXXPPPPTXXXF 530
PPPP F
Sbjct: 780 FKGGPPPPPPPGMF 793
Score = 26.6 bits (56), Expect(2) = 0.44
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 691 PPPPPPPP 714
PPPPPPPP
Sbjct: 758 PPPPPPPP 765
Score = 24.2 bits (50), Expect(2) = 0.44
Identities = 10/30 (33%), Positives = 10/30 (33%)
Frame = +1
Query: 694 PPPPPPPXXXXXXXXXXXXXPXXXXXPXXP 783
PPPPPPP P P P
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 23.8 bits (49), Expect(2) = 3.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 691 PPPPPPP 711
PPPPPPP
Sbjct: 726 PPPPPPP 732
Score = 23.8 bits (49), Expect(2) = 3.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 694 PPPPPPP 714
PPPPPPP
Sbjct: 742 PPPPPPP 748
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 41.1 bits (92), Expect = 0.001
Identities = 29/95 (30%), Positives = 31/95 (32%)
Frame = +1
Query: 235 PXPEKKIFNPPXPXGXGGXSLXKIXGRXXPPREKKXGPXXGGGGGXXXXPPXGXFFXXXX 414
P P K + P G +L I G PP P GG PP G
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPP--PGLPPITGG---PPPPPPPGGLPPITG 740
Query: 415 XXXPXPPFFXGXPXXXNXXPPXHXXXGXXPPPPPP 519
P PP P PP G PPPPPP
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/74 (29%), Positives = 22/74 (29%)
Frame = +3
Query: 309 GAXXPPPGKKKXTPXXGGGGXXXXPPXGGFFXXXXXXXXXPXXFXGXPXXXKXXPPXPXX 488
G PPP P GG PP GG P G P PP P
Sbjct: 724 GGPPPPPPPGGLPPITGG--PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP--PPPPGG 779
Query: 489 XGXXXPPPPTXXXF 530
PPPP F
Sbjct: 780 FKGGPPPPPPPGMF 793
Score = 26.6 bits (56), Expect(2) = 0.45
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 691 PPPPPPPP 714
PPPPPPPP
Sbjct: 758 PPPPPPPP 765
Score = 24.2 bits (50), Expect(2) = 0.45
Identities = 10/30 (33%), Positives = 10/30 (33%)
Frame = +1
Query: 694 PPPPPPPXXXXXXXXXXXXXPXXXXXPXXP 783
PPPPPPP P P P
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 23.8 bits (49), Expect(2) = 3.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 691 PPPPPPP 711
PPPPPPP
Sbjct: 726 PPPPPPP 732
Score = 23.8 bits (49), Expect(2) = 3.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 694 PPPPPPP 714
PPPPPPP
Sbjct: 742 PPPPPPP 748
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 41.1 bits (92), Expect = 0.001
Identities = 29/95 (30%), Positives = 31/95 (32%)
Frame = +1
Query: 235 PXPEKKIFNPPXPXGXGGXSLXKIXGRXXPPREKKXGPXXGGGGGXXXXPPXGXFFXXXX 414
P P K + P G +L I G PP P GG PP G
Sbjct: 269 PPPTKMNLSAPSTSAGGSSALPPITGGPPPP--PGLPPITGG---PPPPPPPGGLPPITG 323
Query: 415 XXXPXPPFFXGXPXXXNXXPPXHXXXGXXPPPPPP 519
P PP P PP G PPPPPP
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/74 (29%), Positives = 22/74 (29%)
Frame = +3
Query: 309 GAXXPPPGKKKXTPXXGGGGXXXXPPXGGFFXXXXXXXXXPXXFXGXPXXXKXXPPXPXX 488
G PPP P GG PP GG P G P PP P
Sbjct: 307 GGPPPPPPPGGLPPITGG--PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP--PPPPGG 362
Query: 489 XGXXXPPPPTXXXF 530
PPPP F
Sbjct: 363 FKGGPPPPPPPGMF 376
Score = 26.6 bits (56), Expect(2) = 0.46
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 691 PPPPPPPP 714
PPPPPPPP
Sbjct: 341 PPPPPPPP 348
Score = 24.2 bits (50), Expect(2) = 0.46
Identities = 10/30 (33%), Positives = 10/30 (33%)
Frame = +1
Query: 694 PPPPPPPXXXXXXXXXXXXXPXXXXXPXXP 783
PPPPPPP P P P
Sbjct: 352 PPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 23.8 bits (49), Expect(2) = 3.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 691 PPPPPPP 711
PPPPPPP
Sbjct: 309 PPPPPPP 315
Score = 23.8 bits (49), Expect(2) = 3.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 694 PPPPPPP 714
PPPPPPP
Sbjct: 325 PPPPPPP 331
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/70 (31%), Positives = 22/70 (31%)
Frame = +1
Query: 310 GRXXPPREKKXGPXXGGGGGXXXXPPXGXFFXXXXXXXPXPPFFXGXPXXXNXXPPXHXX 489
G PP K P G G P G P PP P PP
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP-PR 293
Query: 490 XGXXPPPPPP 519
G PPPPPP
Sbjct: 294 AGSPPPPPPP 303
Score = 36.7 bits (81), Expect = 0.021
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = +3
Query: 321 PPPGKKKXTPXXGGGGXXXXPPXGGFFXXXXXXXXXPXXFXGXPXXXKXXPPXPXXXGXX 500
PPP K +P G G PP G P P P P G
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 501 XPPPP 515
PPPP
Sbjct: 298 PPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/70 (31%), Positives = 22/70 (31%)
Frame = +1
Query: 310 GRXXPPREKKXGPXXGGGGGXXXXPPXGXFFXXXXXXXPXPPFFXGXPXXXNXXPPXHXX 489
G PP K P G G P G P PP P PP
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP-PR 314
Query: 490 XGXXPPPPPP 519
G PPPPPP
Sbjct: 315 AGSPPPPPPP 324
Score = 36.7 bits (81), Expect = 0.021
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = +3
Query: 321 PPPGKKKXTPXXGGGGXXXXPPXGGFFXXXXXXXXXPXXFXGXPXXXKXXPPXPXXXGXX 500
PPP K +P G G PP G P P P P G
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 501 XPPPP 515
PPPP
Sbjct: 319 PPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/70 (31%), Positives = 22/70 (31%)
Frame = +1
Query: 310 GRXXPPREKKXGPXXGGGGGXXXXPPXGXFFXXXXXXXPXPPFFXGXPXXXNXXPPXHXX 489
G PP K P G G P G P PP P PP
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP-PR 299
Query: 490 XGXXPPPPPP 519
G PPPPPP
Sbjct: 300 AGSPPPPPPP 309
Score = 36.7 bits (81), Expect = 0.021
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = +3
Query: 321 PPPGKKKXTPXXGGGGXXXXPPXGGFFXXXXXXXXXPXXFXGXPXXXKXXPPXPXXXGXX 500
PPP K +P G G PP G P P P P G
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 501 XPPPP 515
PPPP
Sbjct: 304 PPPPP 308
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 26.6 bits (56), Expect(3) = 0.017
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 691 PPPPPPPP 714
PPPPPPPP
Sbjct: 649 PPPPPPPP 656
Score = 24.6 bits (51), Expect(3) = 0.017
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = +1
Query: 451 PXXXNXXPPXHXXXGXXPPPPPP 519
P N P + PPPPPP
Sbjct: 593 PQAPNYGTPENRPHAVPPPPPPP 615
Score = 23.0 bits (47), Expect(3) = 0.017
Identities = 10/29 (34%), Positives = 10/29 (34%)
Frame = +1
Query: 502 PPPPPPXXXXXXXXXXXXXXFXXPXPPXG 588
PPPPPP P PP G
Sbjct: 612 PPPPPPQSFGMAPISSAAPPPPPPPPPMG 640
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 26.6 bits (56), Expect(3) = 0.018
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 691 PPPPPPPP 714
PPPPPPPP
Sbjct: 475 PPPPPPPP 482
Score = 24.6 bits (51), Expect(3) = 0.018
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = +1
Query: 451 PXXXNXXPPXHXXXGXXPPPPPP 519
P N P + PPPPPP
Sbjct: 419 PQAPNYGTPENRPHAVPPPPPPP 441
Score = 23.0 bits (47), Expect(3) = 0.018
Identities = 10/29 (34%), Positives = 10/29 (34%)
Frame = +1
Query: 502 PPPPPPXXXXXXXXXXXXXXFXXPXPPXG 588
PPPPPP P PP G
Sbjct: 438 PPPPPPQSFGMAPISSAAPPPPPPPPPMG 466
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 35.5 bits (78), Expect = 0.050
Identities = 22/76 (28%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
Frame = +3
Query: 294 PXKNXGAXXPPP-GKKKXTPXXGGGGXXXXPPXGGFFXXXXXXXXXPXXFXGXPXXXKXX 470
P K G PPP G+ + G PP G P G +
Sbjct: 99 PPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRP 158
Query: 471 PPXPXXXGXXXPPPPT 518
PP P G PPPPT
Sbjct: 159 PPPPKGTGS-PPPPPT 173
Score = 35.5 bits (78), Expect = 0.050
Identities = 22/76 (28%), Positives = 26/76 (34%), Gaps = 1/76 (1%)
Frame = +3
Query: 294 PXKNXGAXXPPP-GKKKXTPXXGGGGXXXXPPXGGFFXXXXXXXXXPXXFXGXPXXXKXX 470
P K G+ PPP G+ + G PP G P G +
Sbjct: 223 PPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRP 282
Query: 471 PPXPXXXGXXXPPPPT 518
PP P G PPPPT
Sbjct: 283 PPPP--KGTGTPPPPT 296
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/76 (28%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
Frame = +3
Query: 294 PXKNXGAXXPPP-GKKKXTPXXGGGGXXXXPPXGGFFXXXXXXXXXPXXFXGXPXXXKXX 470
P K G PPP G+ + G PP G P G +
Sbjct: 192 PPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLSGEGNASRRP 251
Query: 471 PPXPXXXGXXXPPPPT 518
PP P G PPPPT
Sbjct: 252 PPPPKGTGS-PPPPPT 266
Score = 32.7 bits (71), Expect = 0.35
Identities = 21/76 (27%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
Frame = +3
Query: 294 PXKNXGAXXPPP-GKKKXTPXXGGGGXXXXPPXGGFFXXXXXXXXXPXXFXGXPXXXKXX 470
P K G+ PPP G+ + G PP G P +
Sbjct: 130 PPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRP 189
Query: 471 PPXPXXXGXXXPPPPT 518
PP P G PPPPT
Sbjct: 190 PPPPKGTGTP-PPPPT 204
Score = 31.9 bits (69), Expect = 0.61
Identities = 22/77 (28%), Positives = 26/77 (33%), Gaps = 2/77 (2%)
Frame = +3
Query: 294 PXKNXGAXXPPP-GKKKX-TPXXGGGGXXXXPPXGGFFXXXXXXXXXPXXFXGXPXXXKX 467
P K G PPP G+ + + G PP G P G +
Sbjct: 67 PPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRR 126
Query: 468 XPPXPXXXGXXXPPPPT 518
PP P G PPPPT
Sbjct: 127 PPPPPKGTGS-PPPPPT 142
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 425 PPXXFXWXPPXKXIXXPPPTXXGGXXPPPP 514
P F PP PPP GG PPPP
Sbjct: 59 PKPSFFIPPPVPNGFIPPPPGPGGIPPPPP 88
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +2
Query: 428 PXXFXWXPPXKX-IXXPPPTXXGGXXPPPP 514
P F PP I PPP GG PPPP
Sbjct: 70 PNGFIPPPPGPGGIPPPPPMFAGGIPPPPP 99
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/85 (27%), Positives = 25/85 (29%)
Frame = +1
Query: 259 NPPXPXGXGGXSLXKIXGRXXPPREKKXGPXXGGGGGXXXXPPXGXFFXXXXXXXPXPPF 438
N P P G G PP + P G PP F P PPF
Sbjct: 705 NAPPPPGIPGYPPAPPPPGVGPPPPQGIPPM----GFDPNKPPPPMFQQGFNAGAPPPPF 760
Query: 439 FXGXPXXXNXXPPXHXXXGXXPPPP 513
G + PP PPPP
Sbjct: 761 GRGAGPMSSFPPPPRGGMHHMPPPP 785
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/56 (26%), Positives = 16/56 (28%)
Frame = +2
Query: 449 PPXKXIXXPPPTXXGGXXPPPPHPXXXXXXXXXXXXXXFXXXXXPXXXFSXSFXXG 616
PP + PPP G P PP P F P F F G
Sbjct: 699 PPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAG 754
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.5
Identities = 26/97 (26%), Positives = 26/97 (26%)
Frame = -1
Query: 713 GGGGGGGGXXXXXXXXXXXXXXXXXGXXXXPPPXXXKKXKXXPXGGXGXXXXXXXXXXXX 534
GGGG GGG G PPP GG G
Sbjct: 81 GGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGG 140
Query: 533 XKXXXGGGGGGXXPXXXWXGGXXFXXXGXPXKXGGXG 423
GGGGGG GG G GG G
Sbjct: 141 C---GGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 174
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +1
Query: 586 GXXFXFFXXXGGGXXXXPXXXXXXXXXXXXXXXXXPPPPPPPP 714
G F GGG P PPPPPPPP
Sbjct: 17 GFLFPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPP 59
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 23.8 bits (49), Expect(2) = 3.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 691 PPPPPPP 711
PPPPPPP
Sbjct: 122 PPPPPPP 128
Score = 23.8 bits (49), Expect(2) = 3.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 694 PPPPPPP 714
PPPPPPP
Sbjct: 138 PPPPPPP 144
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = +1
Query: 322 PPREKKXGPXXGGGGGXXXXPPXGXFFXXXXXXXPXPPFFXGXPXXXNXXPPXHXXXGXX 501
PP + GP G G PP F P PP PP G
Sbjct: 302 PPPGRTPGPP--GMPGMPPPPPPSRFGPPGMGGMPPPP------------PPGMRYPGGM 347
Query: 502 PPPPPP 519
PPPPPP
Sbjct: 348 PPPPPP 353
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 425 PPXXFXWXPPXKXIXXPPPTXXGGXXPPPPHP 520
PP + PP PPP PPPP P
Sbjct: 58 PPCPAQFCPPPPICPPPPPPPMPCPPPPPPMP 89
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = +1
Query: 322 PPREKKXGPXXGGGGGXXXXPPXGXFFXXXXXXXPXPPFFXGXPXXXNXXPPXHXXXGXX 501
PP + GP G G PP F P PP PP G
Sbjct: 312 PPPGRTPGPP--GMPGMPPPPPPSRFGPPGMGGMPPPP------------PPGMRYPGGM 357
Query: 502 PPPPPP 519
PPPPPP
Sbjct: 358 PPPPPP 363
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 425 PPXXFXWXPPXKXIXXPPPTXXGGXXPPPPHP 520
PP F PP PPP G PPP P
Sbjct: 291 PPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMP 322
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/66 (30%), Positives = 20/66 (30%)
Frame = +1
Query: 256 FNPPXPXGXGGXSLXKIXGRXXPPREKKXGPXXGGGGGXXXXPPXGXFFXXXXXXXPXPP 435
F PP P G GR PP P G G PP P PP
Sbjct: 295 FFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMM---FRGGPYPP 351
Query: 436 FFXGXP 453
FF P
Sbjct: 352 FFPPPP 357
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 425 PPXXFXWXPPXKXIXXPPPTXXGGXXPPPPHP 520
PP F PP PPP G PPP P
Sbjct: 291 PPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMP 322
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/66 (30%), Positives = 20/66 (30%)
Frame = +1
Query: 256 FNPPXPXGXGGXSLXKIXGRXXPPREKKXGPXXGGGGGXXXXPPXGXFFXXXXXXXPXPP 435
F PP P G GR PP P G G PP P PP
Sbjct: 295 FFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMM---FRGGPYPP 351
Query: 436 FFXGXP 453
FF P
Sbjct: 352 FFPPPP 357
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 473 PPPTXXGGXXPPPPHP 520
PPP GG PPPP P
Sbjct: 581 PPPPMLGGPPPPPPPP 596
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 424 PXPPFFXGXPXXXNXXPPXHXXXGXXPPPPPP 519
P PP PP G PPPPPP
Sbjct: 564 PPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPP 595
>AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi
domain-containing protein2 protein.
Length = 975
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 449 PPXKXIXXPPPTXXGGXXPPPPHP 520
PP + PP T G PPPP P
Sbjct: 12 PPVPPVGFPPVTAPPGLHPPPPVP 35
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.5
Identities = 26/97 (26%), Positives = 26/97 (26%)
Frame = -1
Query: 713 GGGGGGGGXXXXXXXXXXXXXXXXXGXXXXPPPXXXKKXKXXPXGGXGXXXXXXXXXXXX 534
GGGGGGGG G PPP GG G
Sbjct: 26 GGGGGGGG------CGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPC 79
Query: 533 XKXXXGGGGGGXXPXXXWXGGXXFXXXGXPXKXGGXG 423
GGGGG GG G GG G
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGG 116
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.5
Identities = 26/97 (26%), Positives = 26/97 (26%)
Frame = -1
Query: 713 GGGGGGGGXXXXXXXXXXXXXXXXXGXXXXPPPXXXKKXKXXPXGGXGXXXXXXXXXXXX 534
GGGGGGGG G PPP GG G
Sbjct: 26 GGGGGGGG------CGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPC 79
Query: 533 XKXXXGGGGGGXXPXXXWXGGXXFXXXGXPXKXGGXG 423
GGGGG GG G GG G
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGG 116
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 473 PPPTXXGGXXPPPPHP 520
PPP GG PPPP P
Sbjct: 664 PPPGGLGGFMPPPPPP 679
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 7.5
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = +3
Query: 309 GAXXPPPGKKKXTPXXGGGGXXXXPPXGGFFXXXXXXXXXPXXFXGXPXXXKXXPPXPXX 488
GA PPP GG G PP GG P G P PP P
Sbjct: 388 GAFAPPPSAFGAPQGPGGPGGYGPPPPGG--PGAPGSYGPP---QGGPGG--FGPPPPGG 440
Query: 489 XGXXXPPP 512
G PPP
Sbjct: 441 PGAYGPPP 448
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 473 PPPTXXGGXXPPPPHP 520
PPP GG PPPP P
Sbjct: 664 PPPGGLGGFMPPPPPP 679
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 425 PPXXFXWXPPXKXIXXPPPTXXGGXXPPPP 514
PP F PP PPP G PPP
Sbjct: 41 PPPCFDCPPPAPIFVAPPPPPCFGPACPPP 70
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = +1
Query: 424 PXPP--FFXGXPXXXNXXPPXHXXXGXXP--PPPP 516
P PP FF G PP H G P PPPP
Sbjct: 24 PPPPDWFFPGPLRPWGPPPPWHRNRGPPPFGPPPP 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,056,019
Number of Sequences: 27780
Number of extensions: 268201
Number of successful extensions: 4259
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2716
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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