Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_K02
         (941 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0317 - 16328558-16328612,16328698-16328901,16329794-163300...    99   6e-21
01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419           93   3e-19
10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595     29   7.1  
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57...    29   7.1  
03_06_0610 + 35052455-35053429,35054936-35055511                       28   9.4  

>11_04_0317 -
           16328558-16328612,16328698-16328901,16329794-16330065,
           16330152-16330220
          Length = 199

 Score = 98.7 bits (235), Expect = 6e-21
 Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
 Frame = +3

Query: 222 EIKLFGRWSCYDVQVSGMSLQDYISVKE-KYAKYLPHSAGRXAHKRFRKAHCPIVERLTN 398
           E+KLF RWS  DVQV+ +SL DY++V   K+A YLPH+AGR + KRFRKA CPIVERLTN
Sbjct: 10  EVKLFSRWSFEDVQVNDISLADYLAVNPTKHATYLPHTAGRYSAKRFRKAQCPIVERLTN 69

Query: 399 SLMMHG 416
           SLMMHG
Sbjct: 70  SLMMHG 75



 Score = 37.5 bits (83), Expect = 0.015
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = +2

Query: 500 PLXVLVTAIINSGPREDSTRI 562
           P+ V+V AIINSGPRED+TRI
Sbjct: 103 PIQVIVDAIINSGPREDATRI 123



 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = +1

Query: 418 RNXGXKLMAVRXAXXAFEXIHLXT 489
           RN G K+MAVR    A E IHL T
Sbjct: 76  RNNGKKIMAVRIVKHAMEIIHLLT 99


>01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419
          Length = 200

 Score = 93.1 bits (221), Expect = 3e-19
 Identities = 43/65 (66%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
 Frame = +3

Query: 225 IKLFGRWSCYDVQVSGMSLQDYISVKE-KYAKYLPHSAGRXAHKRFRKAHCPIVERLTNS 401
           +KLF  WS  DVQV+ +SL DY++V   K+A YLPH+AGR + KRFRKA CP+VERLTNS
Sbjct: 12  VKLFNCWSFEDVQVNDISLADYLAVSSTKHATYLPHTAGRYSAKRFRKAQCPLVERLTNS 71

Query: 402 LMMHG 416
           LMMHG
Sbjct: 72  LMMHG 76



 Score = 37.5 bits (83), Expect = 0.015
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = +2

Query: 500 PLXVLVTAIINSGPREDSTRI 562
           P+ V+V AIINSGPRED+TRI
Sbjct: 104 PIQVIVDAIINSGPREDATRI 124



 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = +1

Query: 418 RNXGXKLMAVRXAXXAFEXIHLXT 489
           RN G K+MAVR    A E IHL T
Sbjct: 77  RNNGKKIMAVRIVKHAMEIIHLLT 100


>10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595
          Length = 514

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
 Frame = +2

Query: 638 RPFRAPAAXSXXPSXPXTXHPPXCXCRMXLIPCTLXGFPLHLRTPIDNRQXPP-RPPSAR 814
           RP  +P   S  P+     + P    RM   PC     P+ +RT I     PP  PP AR
Sbjct: 256 RPTESPNPRSRFPAAEAAPYVPVGHFRM---PCHSMAPPVTVRTSIPVFSAPPLPPPGAR 312

Query: 815 LXXXP 829
               P
Sbjct: 313 TQQLP 317


>07_01_0077 +
           566895-567127,567207-567331,571204-571340,571437-571542,
           571635-571885,572018-572128,572209-572320,572626-572716,
           573168-573507,573678-573900,573946-574204,574274-574481,
           574572-574622,574712-574870,574956-575120,575322-575399,
           575732-576031,576107-576259,576871-576918,577019-577188,
           577738-577852,578462-578623,578789-578893,578969-579199,
           579277-579410,579484-579738,579822-580110,580214-580306,
           580395-580520,580646-580897
          Length = 1693

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 157 T*PRQAAWLWKPCLYHKPPTF 219
           T P Q +WLW+  L H P  F
Sbjct: 88  TDPSQCSWLWREVLKHNPDAF 108


>03_06_0610 + 35052455-35053429,35054936-35055511
          Length = 516

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = -1

Query: 260 HIVATPSAEKLDFR---NVGGLW*RHGFHN-HAACLGYVVIPVLLGHDWYFSITK*K 102
           ++V TP A  L F      GGLW  +G  +  AAC+  V++ V+   DW+    + K
Sbjct: 423 YLVGTPVAVTLAFGARVGFGGLW--YGLLSAQAACVALVLLAVVWRTDWHLEALRAK 477


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,696,560
Number of Sequences: 37544
Number of extensions: 321600
Number of successful extensions: 770
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)