Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_K02
(941 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 124 6e-28
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 124 6e-28
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 124 6e-28
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 124 6e-28
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 119 1e-26
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 38 0.070
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 124 bits (298), Expect = 6e-28
Identities = 55/72 (76%), Positives = 63/72 (87%)
Frame = +3
Query: 201 PQAADIPEIKLFGRWSCYDVQVSGMSLQDYISVKEKYAKYLPHSAGRXAHKRFRKAHCPI 380
P A+ P+IKLFG+WS DVQ++ +SLQDYI+VKEKYAKYLPHSAGR A KRFRKA CPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 381 VERLTNSLMMHG 416
VERLTNS+MMHG
Sbjct: 69 VERLTNSMMMHG 80
Score = 42.3 bits (95), Expect = 0.002
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +2
Query: 494 EXPLXVLVTAIINSGPREDSTRI 562
E PL VLV AIINSGPREDSTRI
Sbjct: 106 ENPLQVLVNAIINSGPREDSTRI 128
Score = 31.9 bits (69), Expect = 3.5
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +1
Query: 418 RNXGXKLMAVRXAXXAFEXIHLXT 489
RN G KLM VR AFE IHL T
Sbjct: 81 RNNGKKLMTVRIVKHAFEIIHLLT 104
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 124 bits (298), Expect = 6e-28
Identities = 55/72 (76%), Positives = 63/72 (87%)
Frame = +3
Query: 201 PQAADIPEIKLFGRWSCYDVQVSGMSLQDYISVKEKYAKYLPHSAGRXAHKRFRKAHCPI 380
P A+ P+IKLFG+WS DVQ++ +SLQDYI+VKEKYAKYLPHSAGR A KRFRKA CPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 381 VERLTNSLMMHG 416
VERLTNS+MMHG
Sbjct: 69 VERLTNSMMMHG 80
Score = 42.3 bits (95), Expect = 0.002
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +2
Query: 494 EXPLXVLVTAIINSGPREDSTRI 562
E PL VLV AIINSGPREDSTRI
Sbjct: 106 ENPLQVLVNAIINSGPREDSTRI 128
Score = 31.9 bits (69), Expect = 3.5
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +1
Query: 418 RNXGXKLMAVRXAXXAFEXIHLXT 489
RN G KLM VR AFE IHL T
Sbjct: 81 RNNGKKLMTVRIVKHAFEIIHLLT 104
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 124 bits (298), Expect = 6e-28
Identities = 55/72 (76%), Positives = 63/72 (87%)
Frame = +3
Query: 201 PQAADIPEIKLFGRWSCYDVQVSGMSLQDYISVKEKYAKYLPHSAGRXAHKRFRKAHCPI 380
P A+ P+IKLFG+WS DVQ++ +SLQDYI+VKEKYAKYLPHSAGR A KRFRKA CPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 381 VERLTNSLMMHG 416
VERLTNS+MMHG
Sbjct: 69 VERLTNSMMMHG 80
Score = 42.3 bits (95), Expect = 0.002
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +2
Query: 494 EXPLXVLVTAIINSGPREDSTRI 562
E PL VLV AIINSGPREDSTRI
Sbjct: 106 ENPLQVLVNAIINSGPREDSTRI 128
Score = 31.9 bits (69), Expect = 3.5
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +1
Query: 418 RNXGXKLMAVRXAXXAFEXIHLXT 489
RN G KLM VR AFE IHL T
Sbjct: 81 RNNGKKLMTVRIVKHAFEIIHLLT 104
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 124 bits (298), Expect = 6e-28
Identities = 55/72 (76%), Positives = 63/72 (87%)
Frame = +3
Query: 201 PQAADIPEIKLFGRWSCYDVQVSGMSLQDYISVKEKYAKYLPHSAGRXAHKRFRKAHCPI 380
P A+ P+IKLFG+WS DVQ++ +SLQDYI+VKEKYAKYLPHSAGR A KRFRKA CPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 381 VERLTNSLMMHG 416
VERLTNS+MMHG
Sbjct: 69 VERLTNSMMMHG 80
Score = 42.3 bits (95), Expect = 0.002
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +2
Query: 494 EXPLXVLVTAIINSGPREDSTRI 562
E PL VLV AIINSGPREDSTRI
Sbjct: 106 ENPLQVLVNAIINSGPREDSTRI 128
Score = 31.9 bits (69), Expect = 3.5
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +1
Query: 418 RNXGXKLMAVRXAXXAFEXIHLXT 489
RN G KLM VR AFE IHL T
Sbjct: 81 RNNGKKLMTVRIVKHAFEIIHLLT 104
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 119 bits (287), Expect = 1e-26
Identities = 53/72 (73%), Positives = 61/72 (84%)
Frame = +3
Query: 201 PQAADIPEIKLFGRWSCYDVQVSGMSLQDYISVKEKYAKYLPHSAGRXAHKRFRKAHCPI 380
P A+ P+IKLFG+WS DVQ++ +SLQDYI+VKEKYAKYLPHSAGR A FRKA CPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANAFRKAQCPI 68
Query: 381 VERLTNSLMMHG 416
VERLTNS+MMHG
Sbjct: 69 VERLTNSMMMHG 80
Score = 42.3 bits (95), Expect = 0.002
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +2
Query: 494 EXPLXVLVTAIINSGPREDSTRI 562
E PL VLV AIINSGPREDSTRI
Sbjct: 106 ENPLQVLVNAIINSGPREDSTRI 128
Score = 31.9 bits (69), Expect = 3.5
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +1
Query: 418 RNXGXKLMAVRXAXXAFEXIHLXT 489
RN G KLM VR AFE IHL T
Sbjct: 81 RNNGKKLMTVRIVKHAFEIIHLLT 104
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 37.5 bits (83), Expect = 0.070
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 366 AHCPIVERLTNSLMMHG 416
A CPIVERLTNS+MMHG
Sbjct: 1 AQCPIVERLTNSMMMHG 17
Score = 31.9 bits (69), Expect = 3.5
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +1
Query: 418 RNXGXKLMAVRXAXXAFEXIHLXT 489
RN G KLM VR AFE IHL T
Sbjct: 18 RNNGKKLMTVRIVKHAFEIIHLLT 41
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,920,908
Number of Sequences: 237096
Number of extensions: 1669246
Number of successful extensions: 2929
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2928
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12381054106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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