Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_J23
(894 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035674-1|AAH35674.1| 463|Homo sapiens WD repeat domain 40B pr... 33 1.1
AL590425-1|CAH69964.1| 463|Homo sapiens WD repeat domain 40B pr... 33 1.1
DQ518909-1|ABG24246.1| 453|Homo sapiens centrosome related prot... 33 1.4
BC063823-1|AAH63823.1| 453|Homo sapiens WD repeat domain 40A pr... 33 1.4
BC008893-1|AAH08893.2| 421|Homo sapiens WDR40A protein protein. 33 1.4
AL445072-1|CAH70502.1| 463|Homo sapiens novel protein protein. 33 1.4
AL354989-6|CAI15302.1| 227|Homo sapiens WD repeat domain 40A pr... 33 1.4
AL354989-5|CAI15301.1| 453|Homo sapiens WD repeat domain 40A pr... 33 1.4
AL354989-4|CAI15300.1| 189|Homo sapiens WD repeat domain 40A pr... 33 1.4
AB067479-1|BAB67785.1| 476|Homo sapiens KIAA1892 protein protein. 33 1.4
Y14330-1|CAA74706.1| 1223|Homo sapiens jagged2 protein protein. 32 3.2
AF111170-2|AAD15562.1| 1238|Homo sapiens Jagged2 protein. 32 3.2
AF029779-1|AAB84216.1| 1200|Homo sapiens hJAG2.del-E6 protein. 32 3.2
AF029778-1|AAB84215.1| 1238|Homo sapiens Jagged2 protein. 32 3.2
AF020201-1|AAB71189.1| 1238|Homo sapiens Jagged 2 protein. 32 3.2
AF003521-1|AAB61285.1| 1238|Homo sapiens Jagged 2 protein. 32 3.2
>BC035674-1|AAH35674.1| 463|Homo sapiens WD repeat domain 40B
protein.
Length = 463
Score = 33.5 bits (73), Expect = 1.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 761 QXGXXRRVFAQDWISXSXHVCGCRCGTLF 675
+ G +VFA W++ VCG +C TLF
Sbjct: 93 ELGTVNKVFASQWLNSRQVVCGTKCNTLF 121
>AL590425-1|CAH69964.1| 463|Homo sapiens WD repeat domain 40B
protein.
Length = 463
Score = 33.5 bits (73), Expect = 1.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 761 QXGXXRRVFAQDWISXSXHVCGCRCGTLF 675
+ G +VFA W++ VCG +C TLF
Sbjct: 93 ELGTVNKVFASQWLNSRQVVCGTKCNTLF 121
>DQ518909-1|ABG24246.1| 453|Homo sapiens centrosome related protein
protein.
Length = 453
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 755 GXXRRVFAQDWISXSXHVCGCRCGTLF 675
G +VFA W++ VCG +C TLF
Sbjct: 87 GTLNKVFASQWLNHRQVVCGTKCNTLF 113
>BC063823-1|AAH63823.1| 453|Homo sapiens WD repeat domain 40A
protein.
Length = 453
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 755 GXXRRVFAQDWISXSXHVCGCRCGTLF 675
G +VFA W++ VCG +C TLF
Sbjct: 87 GTLNKVFASQWLNHRQVVCGTKCNTLF 113
>BC008893-1|AAH08893.2| 421|Homo sapiens WDR40A protein protein.
Length = 421
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 755 GXXRRVFAQDWISXSXHVCGCRCGTLF 675
G +VFA W++ VCG +C TLF
Sbjct: 55 GTLNKVFASQWLNHRQVVCGTKCNTLF 81
>AL445072-1|CAH70502.1| 463|Homo sapiens novel protein protein.
Length = 463
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 755 GXXRRVFAQDWISXSXHVCGCRCGTLF 675
G +VFA W++ VCG +C TLF
Sbjct: 95 GTLNKVFASQWLNARQVVCGTKCNTLF 121
>AL354989-6|CAI15302.1| 227|Homo sapiens WD repeat domain 40A
protein.
Length = 227
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 755 GXXRRVFAQDWISXSXHVCGCRCGTLF 675
G +VFA W++ VCG +C TLF
Sbjct: 69 GTLNKVFASQWLNHRQVVCGTKCNTLF 95
>AL354989-5|CAI15301.1| 453|Homo sapiens WD repeat domain 40A
protein.
Length = 453
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 755 GXXRRVFAQDWISXSXHVCGCRCGTLF 675
G +VFA W++ VCG +C TLF
Sbjct: 87 GTLNKVFASQWLNHRQVVCGTKCNTLF 113
>AL354989-4|CAI15300.1| 189|Homo sapiens WD repeat domain 40A
protein.
Length = 189
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 755 GXXRRVFAQDWISXSXHVCGCRCGTLF 675
G +VFA W++ VCG +C TLF
Sbjct: 66 GTLNKVFASQWLNHRQVVCGTKCNTLF 92
>AB067479-1|BAB67785.1| 476|Homo sapiens KIAA1892 protein protein.
Length = 476
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 755 GXXRRVFAQDWISXSXHVCGCRCGTLF 675
G +VFA W++ VCG +C TLF
Sbjct: 110 GTLNKVFASQWLNHRQVVCGTKCNTLF 136
>Y14330-1|CAA74706.1| 1223|Homo sapiens jagged2 protein protein.
Length = 1223
Score = 31.9 bits (69), Expect = 3.2
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +3
Query: 48 CVSNLSKSNXFPCYNDVXXCLD--NXFRCRC 134
C N + N PCYN C+D N FRC C
Sbjct: 771 CTHNTNDCNPLPCYNG-GICVDGVNWFRCEC 800
>AF111170-2|AAD15562.1| 1238|Homo sapiens Jagged2 protein.
Length = 1238
Score = 31.9 bits (69), Expect = 3.2
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +3
Query: 48 CVSNLSKSNXFPCYNDVXXCLD--NXFRCRC 134
C N + N PCYN C+D N FRC C
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCEC 815
>AF029779-1|AAB84216.1| 1200|Homo sapiens hJAG2.del-E6 protein.
Length = 1200
Score = 31.9 bits (69), Expect = 3.2
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +3
Query: 48 CVSNLSKSNXFPCYNDVXXCLD--NXFRCRC 134
C N + N PCYN C+D N FRC C
Sbjct: 748 CTHNTNDCNPLPCYNG-GICVDGVNWFRCEC 777
>AF029778-1|AAB84215.1| 1238|Homo sapiens Jagged2 protein.
Length = 1238
Score = 31.9 bits (69), Expect = 3.2
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +3
Query: 48 CVSNLSKSNXFPCYNDVXXCLD--NXFRCRC 134
C N + N PCYN C+D N FRC C
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCEC 815
>AF020201-1|AAB71189.1| 1238|Homo sapiens Jagged 2 protein.
Length = 1238
Score = 31.9 bits (69), Expect = 3.2
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +3
Query: 48 CVSNLSKSNXFPCYNDVXXCLD--NXFRCRC 134
C N + N PCYN C+D N FRC C
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCEC 815
>AF003521-1|AAB61285.1| 1238|Homo sapiens Jagged 2 protein.
Length = 1238
Score = 31.9 bits (69), Expect = 3.2
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +3
Query: 48 CVSNLSKSNXFPCYNDVXXCLD--NXFRCRC 134
C N + N PCYN C+D N FRC C
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCEC 815
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,108,756
Number of Sequences: 237096
Number of extensions: 1373328
Number of successful extensions: 1758
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1758
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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