Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_J22
(858 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 359 2e-99
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 359 2e-99
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 299 2e-81
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 246 7e-79
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 203 1e-52
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 203 1e-52
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 194 7e-50
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 4e-33
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 88 9e-18
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 88 9e-18
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 87 2e-17
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 87 2e-17
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 87 2e-17
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 55 7e-08
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 45 6e-05
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 45 8e-05
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 40 1e-04
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 42 4e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 39 0.005
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 38 0.009
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 38 0.012
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 35 0.065
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 34 0.11
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 34 0.11
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 34 0.11
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 2.4
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 3.2
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 3.2
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 5.6
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 5.6
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 28 7.4
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 28 7.4
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 28 7.4
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 28 7.4
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 9.8
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 359 bits (882), Expect = 2e-99
Identities = 173/205 (84%), Positives = 179/205 (87%)
Frame = +2
Query: 110 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 289
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 290 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 469
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 470 GEFEAXISKNGQTREHALLAFTLXVKQLIVXVXKMDSTEPPYSEPXFEXIXKXVSSYIKX 649
GEFEA ISKNGQTREHALLA TL VKQLIV KMDSTEPP+SE F I VS +IK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 650 IGYXPXAVAFVPISGWXGXXXLXPS 724
IGY P AV FVPISG+ G L S
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVS 205
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 359 bits (882), Expect = 2e-99
Identities = 173/205 (84%), Positives = 179/205 (87%)
Frame = +2
Query: 110 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 289
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 290 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 469
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 470 GEFEAXISKNGQTREHALLAFTLXVKQLIVXVXKMDSTEPPYSEPXFEXIXKXVSSYIKX 649
GEFEA ISKNGQTREHALLA TL VKQLIV KMDSTEPP+SE F I VS +IK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 650 IGYXPXAVAFVPISGWXGXXXLXPS 724
IGY P AV FVPISG+ G L S
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVS 205
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 299 bits (733), Expect = 2e-81
Identities = 140/149 (93%), Positives = 144/149 (96%)
Frame = +2
Query: 110 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 289
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 290 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 469
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 470 GEFEAXISKNGQTREHALLAFTLXVKQLI 556
GEFEA ISKNGQTREHALLA TL VKQL+
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLV 149
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 246 bits (602), Expect(2) = 7e-79
Identities = 113/117 (96%), Positives = 116/117 (99%)
Frame = +2
Query: 110 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 289
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 290 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 460
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 66.5 bits (155), Expect(2) = 7e-79
Identities = 33/58 (56%), Positives = 37/58 (63%)
Frame = +2
Query: 551 LIVXVXKMDSTEPPYSEPXFEXIXKXVSSYIKXIGYXPXAVAFVPISGWXGXXXLXPS 724
L+V KMDSTEPP+SE F I VS +IK IGY P AV FVPISG+ G L S
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVS 171
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 203 bits (495), Expect = 1e-52
Identities = 100/196 (51%), Positives = 135/196 (68%), Gaps = 1/196 (0%)
Frame = +2
Query: 119 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 298
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 299 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 478
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 479 EAXISKNGQTREHALLAFTLXVKQLIVXVXKMDSTEPPYSEPXFEXIXKXVSSYI-KXIG 655
E GQT+EHALL +L V QLIV V K+D+ + +S+ F+ I +S ++ + G
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 344
Query: 656 YXPXAVAFVPISGWXG 703
+ FVP+SG+ G
Sbjct: 345 FSKP--KFVPVSGFTG 358
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 203 bits (495), Expect = 1e-52
Identities = 100/196 (51%), Positives = 135/196 (68%), Gaps = 1/196 (0%)
Frame = +2
Query: 119 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 298
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 299 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 478
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 479 EAXISKNGQTREHALLAFTLXVKQLIVXVXKMDSTEPPYSEPXFEXIXKXVSSYI-KXIG 655
E GQT+EHALL +L V QLIV V K+D+ + +S+ F+ I +S ++ + G
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 362
Query: 656 YXPXAVAFVPISGWXG 703
+ FVP+SG+ G
Sbjct: 363 FSKP--KFVPVSGFTG 376
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 194 bits (473), Expect = 7e-50
Identities = 88/198 (44%), Positives = 130/198 (65%), Gaps = 1/198 (0%)
Frame = +2
Query: 113 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 292
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 293 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 473 EFEAXISKNGQTREHALLAFTLXVKQLIVXVXKMDSTEPPYSEPXFEXIXKXVSSYIKXI 652
EFE + GQTREH++L T VK L++ V KMD + E F+ I ++ +++ +
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKL 283
Query: 653 GYXPXA-VAFVPISGWXG 703
G+ P + +VP SG G
Sbjct: 284 GFNPKTDITYVPCSGLTG 301
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 4e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +2
Query: 110 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 289
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 290 DKLKAER 310
DKLK +
Sbjct: 61 DKLKVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 87.8 bits (208), Expect = 9e-18
Identities = 59/157 (37%), Positives = 84/157 (53%), Gaps = 2/157 (1%)
Frame = +2
Query: 122 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 295
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 296 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 475
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 476 FEAXISKNGQTREHALLAFTLXVKQLIVXVXKMDSTE 586
E QT+EH +LA + VK + + + K D E
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 87.8 bits (208), Expect = 9e-18
Identities = 59/157 (37%), Positives = 84/157 (53%), Gaps = 2/157 (1%)
Frame = +2
Query: 122 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 295
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 296 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 475
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 476 FEAXISKNGQTREHALLAFTLXVKQLIVXVXKMDSTE 586
E QT+EH +LA + VK + + + K D E
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 86.6 bits (205), Expect = 2e-17
Identities = 62/183 (33%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Frame = +2
Query: 116 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 295
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 296 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 475
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 476 FEAXISKNGQTREHALLAFTLXV--KQLIVXVXKMDSTEPPYSEPXFEXIXKXVSSYIKX 649
QTREH LLA + V ++V + K+D E P +E E + + +
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 199
Query: 650 IGY 658
GY
Sbjct: 200 FGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 86.6 bits (205), Expect = 2e-17
Identities = 62/183 (33%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Frame = +2
Query: 116 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 295
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 296 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 475
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 476 FEAXISKNGQTREHALLAFTLXV--KQLIVXVXKMDSTEPPYSEPXFEXIXKXVSSYIKX 649
QTREH LLA + V ++V + K+D E P +E E + + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 650 IGY 658
GY
Sbjct: 201 FGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 86.6 bits (205), Expect = 2e-17
Identities = 62/183 (33%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Frame = +2
Query: 116 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 295
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 296 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 475
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 476 FEAXISKNGQTREHALLAFTLXV--KQLIVXVXKMDSTEPPYSEPXFEXIXKXVSSYIKX 649
QTREH LLA + V ++V + K+D E P +E E + + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 650 IGY 658
GY
Sbjct: 201 FGY 203
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 57.2 bits (132), Expect = 1e-08
Identities = 46/148 (31%), Positives = 66/148 (44%)
Frame = +2
Query: 134 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 313
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 314 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAXIS 493
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 494 KNGQTREHALLAFTLXVKQLIVXVXKMD 577
QT + LAF + Q+I + K+D
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 56.0 bits (129), Expect = 3e-08
Identities = 39/113 (34%), Positives = 53/113 (46%)
Frame = +2
Query: 134 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 313
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 314 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 54.8 bits (126), Expect = 7e-08
Identities = 39/124 (31%), Positives = 55/124 (44%)
Frame = +2
Query: 134 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 313
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 314 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAXIS 493
RGITI A + + IID PGH DF + D AVL++ G +
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQTFT 155
Query: 494 KNGQ 505
N Q
Sbjct: 156 VNRQ 159
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 45.2 bits (102), Expect = 6e-05
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +2
Query: 110 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 262
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 263 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 430
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132
Query: 431 QADCAVLIVAAGTG 472
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 44.8 bits (101), Expect = 8e-05
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +2
Query: 110 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 262
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 263 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 430
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132
Query: 431 QADCAVLIVAAGTG 472
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 40.3 bits (90), Expect(2) = 1e-04
Identities = 37/108 (34%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +2
Query: 257 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 433
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 434 ADCAVLIVAAGTGEFEAXISKNGQTREHALLAFTLXVKQLIVXVXKMD 577
AD VL+VAA G E QT + A V QL+V V K+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
Score = 23.0 bits (47), Expect(2) = 1e-04
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 137 IVVIGHVDSGKST 175
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 42.3 bits (95), Expect = 4e-04
Identities = 54/195 (27%), Positives = 81/195 (41%), Gaps = 11/195 (5%)
Frame = +2
Query: 86 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEM 256
++IRD P K+ + V+G+VD+GKST G L + G RT K E
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFES 185
Query: 257 GKGSFKYAWVL------DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMI 418
G+ S +L + + +D + +K VT ID GH ++K I
Sbjct: 186 GRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEKYLKTTI 244
Query: 419 TGTS--QADCAVLIVAAGTGEFEAXISKNGQTREHALLAFTLXVKQLIVXVXKMDSTEPP 592
G + D +L++ A G G T+EH LA +L V +V V K+D
Sbjct: 245 FGMTGHMPDYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMCPAN 296
Query: 593 YSEPXFEXIXKXVSS 637
E + I + V S
Sbjct: 297 ILEETMKNITRLVRS 311
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 38.7 bits (86), Expect = 0.005
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +2
Query: 116 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 292
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 293 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 457
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 38.7 bits (86), Expect = 0.005
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +2
Query: 116 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 292
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 293 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 457
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 37.9 bits (84), Expect = 0.009
Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 12/196 (6%)
Frame = +2
Query: 86 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEM 256
++IRD P K+ + V+G+VD+GKST G L + G RT K E
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFES 185
Query: 257 GKGSFKYAWVL------DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMI 418
G+ S +L + + +D + +K VT ID GH ++K I
Sbjct: 186 GRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEIYLKTTI 244
Query: 419 TGTSQ---ADCAVLIVAAGTGEFEAXISKNGQTREHALLAFTLXVKQLIVXVXKMDSTEP 589
G + + +L++ A G G T+EH LA +L V +V V K+D
Sbjct: 245 FGMHRPYARNYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMCPA 296
Query: 590 PYSEPXFEXIXKXVSS 637
E + I + V S
Sbjct: 297 YILEETMKNITRLVRS 312
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 37.5 bits (83), Expect = 0.012
Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 1/170 (0%)
Frame = +2
Query: 131 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 310
+N+ ++GHVDSGK+T T + E+G S A
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 311 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAX 487
R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ G
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAG----- 108
Query: 488 ISKNGQTREHALLAFTLXVKQLIVXVXKMDSTEPPYSEPXFEXIXKXVSS 637
QT EH LLA ++I+ + K D E + + K + S
Sbjct: 109 --IQPQTAEHLLLASKFCPNRVIIVLNKCDLAEKSKISESAKKVRKGLKS 156
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 35.1 bits (77), Expect = 0.065
Identities = 22/93 (23%), Positives = 38/93 (40%)
Frame = +2
Query: 365 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAXISKNGQTREHALLAFTLXV 544
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 545 KQLIVXVXKMDSTEPPYSEPXFEXIXKXVSSYI 643
L++ K+D + + +E I V +
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQIAGFVQGTV 214
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 34.3 bits (75), Expect = 0.11
Identities = 55/199 (27%), Positives = 82/199 (41%), Gaps = 8/199 (4%)
Frame = +2
Query: 83 QFVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEM 256
+ ++R P+ ++ + + V+G D GKST G L C G K I F + E+
Sbjct: 154 EVLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEV 211
Query: 257 GKGSFKYAWVLDKLKAERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITG 424
G K + V + + RG ++ A E S VT+ID G + K I G
Sbjct: 212 RTG--KTSSVCNDVIGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHG 269
Query: 425 TS--QADCAVLIVAAGTGEFEAXISKNGQTREHALLAFTLXVKQLIVXVXKMDSTEPPYS 598
+ A L+VAA G A TREH L L + + V + KMD +
Sbjct: 270 LTGYTPHFACLVVAADRGITWA-------TREHLGLIAALNI-PMFVLITKMDLVD---- 317
Query: 599 EPXFEXIXKXVSSYIKXIG 655
+ I K VS+ + G
Sbjct: 318 RQGLKKIIKDVSNLVAKAG 336
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 34.3 bits (75), Expect = 0.11
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +2
Query: 134 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 313
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 314 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 34.3 bits (75), Expect = 0.11
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +2
Query: 134 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 313
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 314 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 374 IIDAPGHRDFIKNMITGTSQADCAVLIV 457
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 212 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 313
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 212 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 313
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 131 INIVVIGHVDSGKSTTT 181
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 5.6
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -3
Query: 553 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 395
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 394 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 275
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 633 PHTSRXLATXXLLSLSCPFLD 695
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 633 PHTSRXLATXXLLSLSCPFLD 695
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 633 PHTSRXLATXXLLSLSCPFLD 695
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 633 PHTSRXLATXXLLSLSCPFLD 695
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 368 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 463
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,049,526
Number of Sequences: 27780
Number of extensions: 275649
Number of successful extensions: 771
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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