Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_J18
         (1167 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.        33   2.6  
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.     33   2.6  

>BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.
          Length = 600

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 20/67 (29%), Positives = 21/67 (31%)
 Frame = +3

Query: 711 PXHLGXXPXQEPXXXXXXXPXXXPPXNPXQTXPPSLXPHSRPTPHNLPXTTXXAXPAPKX 890
           P  L   P   P       P   PP  P Q   PS  P   PTP + P       P P  
Sbjct: 86  PPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAM 145

Query: 891 HXXXPXP 911
               P P
Sbjct: 146 PSPPPPP 152


>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
          Length = 1217

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 20/67 (29%), Positives = 21/67 (31%)
 Frame = +3

Query: 711 PXHLGXXPXQEPXXXXXXXPXXXPPXNPXQTXPPSLXPHSRPTPHNLPXTTXXAXPAPKX 890
           P  L   P   P       P   PP  P Q   PS  P   PTP + P       P P  
Sbjct: 631 PPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAM 690

Query: 891 HXXXPXP 911
               P P
Sbjct: 691 PSPPPPP 697


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,212,736
Number of Sequences: 237096
Number of extensions: 891895
Number of successful extensions: 3215
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3003
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16293684080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)