Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_J12
(894 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0722 + 19729331-19729582,19730535-19730644,19730810-197309... 133 2e-31
06_03_1119 + 27760412-27760527,27760851-27761010,27761283-277614... 36 0.057
07_01_0808 - 6326767-6327788,6328270-6328459 31 1.2
06_03_1451 + 30252366-30252373,30252621-30252867,30253441-302538... 29 3.8
08_01_0273 - 2203828-2204124,2204812-2205072,2205161-2205296,220... 29 6.6
04_03_0535 - 16850704-16853001,16854055-16854115,16854228-168543... 29 6.6
02_02_0597 - 11996350-11996483,11997511-11997604,11997877-119980... 29 6.6
12_01_0428 + 3374519-3375423,3376663-3376742,3377206-3377217,337... 28 8.7
10_08_0277 - 16437023-16437304,16437687-16437833,16440169-164403... 28 8.7
07_03_1625 - 28219006-28219041,28219150-28219227,28219318-282193... 28 8.7
04_03_0937 + 20923705-20923833,20924001-20924012,20924413-209244... 28 8.7
>09_04_0722 +
19729331-19729582,19730535-19730644,19730810-19730930,
19731080-19731175,19731429-19731838,19732251-19732309,
19733235-19733287,19733432-19733485
Length = 384
Score = 133 bits (322), Expect = 2e-31
Identities = 55/106 (51%), Positives = 80/106 (75%)
Frame = +2
Query: 113 WIPYKERPEWSDVTPVPEDDGPNPVVVIAHSEKFEDVYDYFRAVLQSNEKSERVLHLTKD 292
W+P RPE +DV PV +DDGP+PVV IA+ ++F +V DYFRA+ + E+S R LHLT +
Sbjct: 15 WLPPSRRPELADVVPVTQDDGPHPVVAIAYRDEFREVMDYFRALYFAGERSVRALHLTAE 74
Query: 293 ALELNPANYTVWQYRRDLLKHLNTDLRTELDYVEAVIKNSPKNYQV 430
++LNP NYTVW +RR +L+ L+ DLR E+D+V+ + + +PKNYQ+
Sbjct: 75 VIDLNPGNYTVWHFRRLVLEALDADLREEMDFVDRIAECNPKNYQI 120
Score = 35.5 bits (78), Expect = 0.057
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 221 VYDYFRAVLQSNEKSERV-LHLTKDALELNPANYTVWQYRRDLLKHLNTDL-RTELDYVE 394
V+ + R VL++ + R + E NP NY +W ++R L + L D+ E ++
Sbjct: 85 VWHFRRLVLEALDADLREEMDFVDRIAECNPKNYQIWHHKRWLAEKLGPDIANKEHEFTR 144
Query: 395 AVIKNSPKNY 424
++ KNY
Sbjct: 145 KILSMDAKNY 154
>06_03_1119 +
27760412-27760527,27760851-27761010,27761283-27761449,
27761525-27761629,27762097-27762864,27762942-27763131,
27763763-27763940,27764106-27764497
Length = 691
Score = 35.5 bits (78), Expect = 0.057
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Frame = +2
Query: 251 SNEKSERVLHLTKDALELNPANYTVWQYRRDLLKH----------LNTDLRTELDYVEAV 400
S ++ L L+ LE+NP YT W YR+ +H + + + EL VE
Sbjct: 37 SRTYTKEALGLSFKLLEINPEAYTAWNYRKLAFQHNIGELSEPEAIKSAIDDELRVVEVA 96
Query: 401 IKNSPKNY 424
++ +PK+Y
Sbjct: 97 LRQNPKSY 104
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 275 LHLTKDALELNPANYTVWQYRRDLL--KHLNTDLRTELDYVEAVIKNSPKNY 424
L + + AL NP +Y W +R+ LL K D + E ++ ++K +N+
Sbjct: 90 LRVVEVALRQNPKSYGAWYHRKWLLNQKLAPVDFKCEFGLLDKLLKVDARNF 141
>07_01_0808 - 6326767-6327788,6328270-6328459
Length = 403
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +2
Query: 158 VPEDDGPNPVVVIAHSEKFEDVYDYFRAVLQSNEKSERVLHLTKDALELNPA 313
V + D P+ + +SE ++ + F+ + +S++ +R HLT++ L+ NP+
Sbjct: 35 VYQTDYPDYYFRVTNSEHLTNLKERFQRMCESSQIRKRYTHLTEEILQENPS 86
>06_03_1451 +
30252366-30252373,30252621-30252867,30253441-30253893,
30253971-30254555
Length = 430
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 155 PVPEDDGPNPVVVIAHSEKFEDVYDYFRAVLQSNEKSERVLHLTK 289
P P GPNP+ ++ ++ + YD + + + EK ERVL L K
Sbjct: 76 PPPPPPGPNPIDILKRLQR-QAFYDIMQ-LREKQEKIERVLTLFK 118
>08_01_0273 -
2203828-2204124,2204812-2205072,2205161-2205296,
2205438-2205656,2206130-2206323,2206339-2206505,
2206862-2207132,2207740-2207784
Length = 529
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Frame = +2
Query: 212 FEDVYDYFRAVLQSNEKSERVLHLTKDALELNPANYTVWQYRRDL--LKHLNTDLRTE-- 379
F+D+YD + + +S +E + ++A E P Y + Y++ L +K + TDL+ +
Sbjct: 277 FDDIYDNYSTLEESKLFTEAIERWDEEAAEELP-GYMKFFYKKVLTTMKSIETDLKLQGN 335
Query: 380 --LDYVEAVI 403
+DYV+ ++
Sbjct: 336 KHVDYVKNLL 345
>04_03_0535 -
16850704-16853001,16854055-16854115,16854228-16854323,
16854394-16854521,16855016-16855067,16855182-16855274,
16855473-16855590,16856456-16856609,16857512-16857643,
16859136-16859216,16859353-16859507,16860118-16860343,
16860423-16860507,16860593-16860689,16861785-16861949,
16862046-16862121,16863041-16863103,16863193-16863359,
16863495-16863669,16863743-16863835,16864694-16864810,
16865589-16865778,16866092-16866126
Length = 1618
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +2
Query: 140 WSDVTPVPEDDGPNPVVVIAHSEKFEDVYDYFRAVLQSNEKSERVLHLTKDALELNPANY 319
WS +TPV P+ +I ++ +D + L + + R + + K A +++ N
Sbjct: 28 WSSITPVSPATTWGPLAIIFIVSASKEAWDDYNRYLSDKKANGREVLVIK-AQDIHVGN- 85
Query: 320 TVWQYRRD 343
VW Y+ D
Sbjct: 86 IVWLYQND 93
>02_02_0597 -
11996350-11996483,11997511-11997604,11997877-11998032,
11998580-11998639,11998733-11998951,11999038-11999377,
12001240-12001571
Length = 444
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = +2
Query: 164 EDDGPNPVVVIAHSEKFEDVYDYFRAVLQSNEKSERVLHLTKDALELNPANYTVWQYRRD 343
+D GP PV+ +AH + V+ FR ++ + L PA + RR
Sbjct: 57 DDRGPRPVLPLAHGD--PSVFPEFRTAAEAEDAVADALR--SGDFNCYPAGVGLPAARRA 112
Query: 344 LLKHLNTDLRTEL 382
+ HL+ DL +L
Sbjct: 113 VADHLSRDLPYKL 125
>12_01_0428 +
3374519-3375423,3376663-3376742,3377206-3377217,
3377337-3377379,3378304-3380332
Length = 1022
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = -2
Query: 473 KCVIFH*SLKLIIIIPDNSLVNSL*PLQHNLILSSSQCSN---VSANLSCIAKQCS 315
KC++F+ ++ +I+I D + + ++ L ++ S C + V+ + +AK CS
Sbjct: 338 KCIVFYKNVVYLILIDDVWSIAAWDAIRSKLPVTDSNCGSRIIVTTRIHTVAKACS 393
>10_08_0277 -
16437023-16437304,16437687-16437833,16440169-16440342,
16441192-16441266,16441653-16441805,16442488-16442751
Length = 364
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = +2
Query: 221 VYDYFRAVLQSNEKSERVLHLTKDALELNPANYTVWQYRRDLLKHLNTDLRTELDYVEAV 400
VY+ + + K ++ + + A+EL P T W D + DL++ L E V
Sbjct: 272 VYNALGVSYKRDNKLDKSIQQFEKAVELQPGYVTAWNNLGDAYEQ-KKDLKSALKAFEEV 330
Query: 401 IKNSPKN 421
+ P N
Sbjct: 331 LLFDPNN 337
>07_03_1625 -
28219006-28219041,28219150-28219227,28219318-28219389,
28219468-28219567,28219632-28219708,28219802-28219872,
28219987-28220066,28220143-28220194,28220376-28220431,
28220506-28220551,28220631-28220682,28220787-28220888,
28220967-28221021,28221101-28221180,28221271-28221321,
28221354-28221377,28221742-28221833,28221928-28222057,
28222156-28222230,28222433-28222543,28222637-28222693
Length = 498
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 302 LNPANYTVWQYRRDLLKHLNTDLRTELDYVEAVIK 406
L NY W R LNTD++ ELD++ + ++
Sbjct: 230 LGGENYVFWGGREGYQTLLNTDMKRELDHLASFLQ 264
>04_03_0937 +
20923705-20923833,20924001-20924012,20924413-20924473,
20924523-20924749,20924859-20925104,20925645-20925657,
20927681-20928302,20928320-20928949,20928960-20929224
Length = 734
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 128 ERPEWSDVTPVPEDDGPNPVVVIAHSEKFEDVYD 229
++ E S P PE P+ V + + EK E VYD
Sbjct: 444 DQSERSPPPPPPESGSPDLAVAMRYLEKVEQVYD 477
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,582,484
Number of Sequences: 37544
Number of extensions: 320702
Number of successful extensions: 666
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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