Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_J09
(926 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 7e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.008
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.019
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.100
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.13
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.17
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.23
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.2
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 2.1
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.1
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 28 2.1
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 28 2.1
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.5 bits (88), Expect = 7e-04
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +3
Query: 792 PAPXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPPXXP 917
P P A P P P PPPPPP PP PP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 35.1 bits (77), Expect = 0.014
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 798 PXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPPXXPXP 923
P A P PP PPPPPP P PP P P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +3
Query: 813 PPAXPGP-PXRXPXXPPPPPPXXXXXPXPPXPP 908
PPA P P P PPP P P PP PP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +3
Query: 393 APQVXPPPPXXRRRXSXGXPRXPXPRXPGPGPPXXPPPXP 512
AP P PP P P P G GPP PPP P
Sbjct: 745 APAPIPVPPPAPIMGGPPPP-PPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 855 PPPPPPXXXXXPXPPXPPXXPXP 923
PPPPPP P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPP 754
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 813 PPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPP 908
PP P P P PPP PP PP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.9 bits (79), Expect = 0.008
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -2
Query: 922 GXGXXGGXGGXGXXXXXGGG-GGGXXGXRXGGPGXAGGXAXXGAG 791
G G GG GG G GG GGG G G G GG G G
Sbjct: 206 GFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
Score = 31.5 bits (68), Expect = 0.17
Identities = 18/35 (51%), Positives = 18/35 (51%)
Frame = -2
Query: 916 GXXGGXGGXGXXXXXGGGGGGXXGXRXGGPGXAGG 812
G GG GG G GG GGG G GGPG GG
Sbjct: 232 GFEGGPGGFGGGP--GGFGGGLGGF-GGGPGGFGG 263
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -2
Query: 916 GXXGGXGGX--GXXXXXGGGGGGXXGXRXGGPGXAGGXAXXGAG 791
G GG GG G GG GGG G G G GG G G
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 29.1 bits (62), Expect = 0.93
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = -2
Query: 514 GGXGGGXXGGPGPGXRGXGXRGXPXXXRRRXXGGGGXTWG 395
GG GGG GGP PG G G G G GG G
Sbjct: 191 GGFGGGS-GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGG 229
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 514 GGXGGGXXGGPGPGXRGXGXRGXP 443
GG GG GGPG G G G P
Sbjct: 248 GGGLGGFGGGPGGFGGGPGGHGGP 271
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.019
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 7/51 (13%)
Frame = +3
Query: 792 PAPXXAXPPAXP---GPPXRXPXXPPPP----PPXXXXXPXPPXPPXXPXP 923
PA + PP P PP PPPP PP P P PP P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 32.7 bits (71), Expect = 0.075
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +3
Query: 798 PXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPX-PPXPPXXPXP 923
P A PP P P PPPP P PP P P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 31.9 bits (69), Expect = 0.13
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 795 APXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPP 908
AP P P PP P PP PP P P PP
Sbjct: 1698 APPQMSAPTPPPPPMSVP-PPPSAPPMPAGPPSAPPPP 1734
Score = 29.5 bits (63), Expect = 0.70
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +3
Query: 792 PAPXXAXPPAXPGPPX-RXPXXPPPPPPXXXXXPXPPXP 905
P P + PP PP P PPPP P P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 29.1 bits (62), Expect = 0.93
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 3/47 (6%)
Frame = +3
Query: 792 PAPXXAXPPAXPGPPXRXPXXPPP---PPPXXXXXPXPPXPPXXPXP 923
PAP A P P P P P P P PP P P P
Sbjct: 1449 PAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVP 1495
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
Frame = +3
Query: 795 APXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPXPPXP----PXXPXP 923
AP PP PP P P PP P PP P P P P
Sbjct: 1704 APTPPPPPMSVPPPPSAPPMPAGPP----SAPPPPLPASSAPSVPNP 1746
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +3
Query: 396 PQVXPPPPXXRRRXSXGXPRXPXPRXPGPGPPXXPPP 506
P + PPP G P P P P P P P
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +3
Query: 798 PXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPP 908
P A P PG P PP P P P P
Sbjct: 1427 PLKASQPTNPGAPSNHAPQVVPPAPMHAVAPVQPKAP 1463
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.3 bits (70), Expect = 0.100
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = +3
Query: 792 PAPXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPX--PPXPPXXPXP 923
P P A P PP P P PP P PP PP P P
Sbjct: 159 PIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Frame = +3
Query: 792 PAPXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPX--PPXPPXXPXP 923
P P P PP P PPP P P PP P P P
Sbjct: 131 PTPQSELRPPTSAPPR--PSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/44 (29%), Positives = 15/44 (34%)
Frame = +3
Query: 372 GQVXXXQAPQVXPPPPXXRRRXSXGXPRXPXPRXPGPGPPXXPP 503
G+ AP P PP + P P P P P PP
Sbjct: 116 GKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPP 159
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Frame = +3
Query: 807 AXPPAXPGPPXRXPXXPPP---PPPXXXXXPXPPXPPXXP 917
A PP+ P PP PP PP P P P P
Sbjct: 122 AAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP 161
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +3
Query: 792 PAPXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPPXXP 917
P P A P P P PPP PP P P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLP 191
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 855 PPPPPPXXXXXPXPPXPP 908
PPPPPP P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +3
Query: 798 PXXAXP-PAXPGP-PXRXPXXPPPPPPXXXXXPXPPXPPXXP 917
P A P P+ P P P P P PP P PP P P
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLP-PPAQPAAP 180
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 798 PXXAXPPAXPGPPXRXPXXPPPPPP 872
P PP P P P PPPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 831 PPXRXPXXPPPPPPXXXXXPXPPXPP 908
PP P PPPPPP PP PP
Sbjct: 5 PPGNPP--PPPPPPGFEPPSQPPPPP 28
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 846 PXXPPPPPPXXXXXPXPPXPPXXPXP 923
P PPPPPP P P PP P P
Sbjct: 6 PGNPPPPPPPPGFEP-PSQPPPPPPP 30
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = +3
Query: 450 PRXPXPRXPGPG--PPXXPPPXPP 515
P P P P PG PP PPP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 813 PPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPP 908
PP P PP PPPP P PP PP
Sbjct: 5 PPGNPPPP------PPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 778 PPPXXPXPXXPPPPXXRDPPXXG 846
PPP P P PP PP G
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPG 31
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 795 APXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPPXXP 917
AP P A P P P PP PP P P P P
Sbjct: 427 APPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAP 467
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +3
Query: 366 AQGQVXXXQAPQVXPPPPXXRRRXSXGXPRXPXPRXPGPGPPXXPPPXPP 515
A G + + PPPP R S G P P PPP P
Sbjct: 347 AAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 792 PAPXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPPXXPXP 923
P A PP P P P P P P P PP P P
Sbjct: 440 PMGAPAAPPLPPSAPI-APPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 7/42 (16%)
Frame = +3
Query: 813 PPAXPG--PPXRXPXX-----PPPPPPXXXXXPXPPXPPXXP 917
PP+ P PP R P PP PPP PP P P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 408 PPPPXXRRRXSXGXPRXPXPRXPGPGPPXXPPP 506
PPPP R + P P R P PP P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Frame = +3
Query: 792 PAPXXAXPPAXPGPPXRXPXXPPP---PPPXXXXXP-XPPXPPXXPXP 923
P+ + PP+ P P PP PP P PP PP P P
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +3
Query: 393 APQVXPPPPXXRRRXSXGXPRXPXPRXPGPGPPXXPP 503
AP PP + P P P PG P PP
Sbjct: 369 APSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 6/48 (12%)
Frame = +3
Query: 792 PAPXXAXP----PAXP--GPPXRXPXXPPPPPPXXXXXPXPPXPPXXP 917
PAP A P PA P G R P P PP P PP P
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAP 436
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Frame = +3
Query: 798 PXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPX--PPXPPXXP 917
P PP+ P P P PP PP PP PP P
Sbjct: 415 PPVPTPPSLP--PSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 798 PXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPPXXP 917
P P P P P PP PP P P P P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 408 PPPPXXRRRXSXGXPRXPXPRXPGPGPPXXPPPXPPXT 521
PPPP R + G P P PP PP P T
Sbjct: 337 PPPPPPPRSNAAG--SIPLPPQGRSAPPPPPPRSAPST 372
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 816 PAXPGPPXRXPXXPPPPPPXXXXXPXPPXPPXXP 917
P P PP P PP P PP P P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +3
Query: 792 PAPXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPXPPXP 905
P PP G P P P P P P P P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 4/43 (9%)
Frame = +3
Query: 792 PAPXXAXPPAXPGPPX----RXPXXPPPPPPXXXXXPXPPXPP 908
P P + P PP R PP PPP P PP
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/34 (32%), Positives = 12/34 (35%)
Frame = +3
Query: 414 PPXXRRRXSXGXPRXPXPRXPGPGPPXXPPPXPP 515
PP + P P P PP PP PP
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 5/49 (10%)
Frame = +3
Query: 792 PAPXXAXP---PAXPGPPXRXPXX--PPPPPPXXXXXPXPPXPPXXPXP 923
PAP A P P+ PP P PP P P P PP P P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 6/50 (12%)
Frame = +3
Query: 792 PAPXXAXPPAXPGPPXRXPXXPPP------PPPXXXXXPXPPXPPXXPXP 923
PAP PP P P P PPP P P P PP P P
Sbjct: 1172 PAPSSGIPPV-PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 30.3 bits (65), Expect = 0.40
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Frame = +3
Query: 792 PAPXXAXP---PAXPGPPXRXPXXPPPPPPXXXXXPXPPXPPXXP 917
PAP A P P+ PP P PP P P P P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAP 1159
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Frame = +3
Query: 792 PAPXXAXP-PAXPG-PPXRXPXX--PPPPPPXXXXXPXPPXPPXXPXP 923
PAP A P PA G PP P PP P P P P P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP 1124
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +3
Query: 792 PAPXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPPXXP 917
P P P P P PPP P P P P P
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAP 1083
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 7/51 (13%)
Frame = +3
Query: 792 PAPXXAXP---PAXPGPPXRXPXXPPPPPPXXXXXPXPPXP----PXXPXP 923
P P A P P+ PP P PP P P P P P P P
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKP 1184
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 3/41 (7%)
Frame = +3
Query: 792 PAPXXAXPPAXPGPPXRXPXXPPP---PPPXXXXXPXPPXP 905
P P + P P P P PPP PP PP P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 3/47 (6%)
Frame = +3
Query: 792 PAPXXAXP---PAXPGPPXRXPXXPPPPPPXXXXXPXPPXPPXXPXP 923
PAP P P+ PP P PP P P P P P
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP 1132
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 4/46 (8%)
Frame = +3
Query: 792 PAPXXAXPPAX-PG---PPXRXPXXPPPPPPXXXXXPXPPXPPXXP 917
P P A PP P PP P PP P P P P P
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 5/49 (10%)
Frame = +3
Query: 792 PAPXXAXPPAXP---GPPXRXPXX--PPPPPPXXXXXPXPPXPPXXPXP 923
P P PP P PP P PP PPP P P P
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 3/47 (6%)
Frame = +3
Query: 792 PAPXXAXPPAXPG---PPXRXPXXPPPPPPXXXXXPXPPXPPXXPXP 923
P P A P P PP P PP P P P P P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 798 PXXAXPPAXPGPPXRXPXXPPPPPP 872
P A PA P P PPPPPP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 27.5 bits (58), Expect = 2.8
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 881 PXPXPPPPPXXAXPP 925
P P PPPPP PP
Sbjct: 234 PLPAPPPPPPPTLPP 248
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +3
Query: 393 APQVXPPPPXXRRRXSXGXPRXPXPRXPGPGPPXXPPP 506
AP PP + S P P P PP PPP
Sbjct: 160 APNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +3
Query: 813 PPAXPGPPXRXPXXPPPPPP 872
P P P PPPPPP
Sbjct: 225 PTYTPKQADPLPAPPPPPPP 244
Score = 21.0 bits (42), Expect(2) = 4.5
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +3
Query: 858 PPPPPXXXXXPXPP 899
PPPP P PP
Sbjct: 273 PPPPATPSQPPRPP 286
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +3
Query: 798 PXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPP 908
P P P P PPPPP P P P
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -2
Query: 514 GGXGGGXXGGPGPGXRG-XGXRGXPXXXRRRXXGGGGXTWGA 392
GG GGG G G G G G RG R G G GA
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGA 67
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +3
Query: 795 APXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPPXXP 917
AP PA P P PP P P P PP P
Sbjct: 556 APSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 798 PXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPPXXP 917
P PPA P P PP P P P P P
Sbjct: 512 PSVPQPPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAP 551
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +3
Query: 795 APXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPPXXP 917
AP PPA P P P P P P PP P
Sbjct: 631 APSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAP 671
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 813 PPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPPXXP 917
PP P P PP P P P PP P
Sbjct: 577 PPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAP 611
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 798 PXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPPXXP 917
P PA P P PP P P P PP P
Sbjct: 647 PSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVP 686
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +3
Query: 795 APXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPPXXPXP 923
AP P+ P PP P P P P P P P
Sbjct: 595 APVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQP 637
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 795 APXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPPXXP 917
AP PP P P P P P P PP P
Sbjct: 601 APSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAP 641
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 792 PAPXXAXPPAXPGPPXRXPXXPPPPP 869
P P A P P + P PPPPP
Sbjct: 149 PRPGTVKSSASPFVPNQNPSAPPPPP 174
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 792 PAPXXAXPPAXPGPPXRXPXXPPPPPPXXXXXPXPPXPPXXPXP 923
P P P P P P PP P P P PP P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEP 145
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,366,253
Number of Sequences: 5004
Number of extensions: 20073
Number of successful extensions: 475
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 469338710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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