Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_J05
(1433 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 42 8e-04
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 38 0.023
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 38 0.023
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 37 0.040
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 37 0.040
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 36 0.093
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 35 0.12
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 33 0.38
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 33 0.50
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 32 0.87
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 32 0.87
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 32 0.87
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 32 0.87
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z68314-1|CAA92658.1| 102|Caenorhabditis elegans Hypothetical pr... 31 2.0
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 2.0
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 31 2.7
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 2.7
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 2.7
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 30 3.5
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 30 4.6
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 30 4.6
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 30 4.6
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 42.3 bits (95), Expect = 8e-04
Identities = 35/91 (38%), Positives = 35/91 (38%)
Frame = -3
Query: 1134 CGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*GVAXRVP 955
CG G G G CG G GG G GG GG G G G G G G G A P
Sbjct: 61 CGGGCGGGGGG----CGGGGGGCGG--GGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPP 114
Query: 954 AWXWXXRAXXGGXGGLXXGXKCXGXLGRGXG 862
A GG GG G C G G G G
Sbjct: 115 -----PPACGGGCGG--GGGGCGGGCGGGGG 138
Score = 40.3 bits (90), Expect = 0.003
Identities = 21/50 (42%), Positives = 21/50 (42%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXG 988
GCG G G G CG G GG G GG GG G G G G G
Sbjct: 140 GCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGGG 189
Score = 39.5 bits (88), Expect = 0.006
Identities = 22/54 (40%), Positives = 22/54 (40%)
Frame = -3
Query: 1134 CGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*G 973
CG G G G CG G GG G GG GG G G G G G G G
Sbjct: 118 CGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCG 171
Score = 36.7 bits (81), Expect = 0.040
Identities = 35/102 (34%), Positives = 35/102 (34%), Gaps = 4/102 (3%)
Frame = -3
Query: 1137 GCGSXRGXGAG----XXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*GV 970
GCG G G G CG G GG G GG GG G G G G G G G
Sbjct: 98 GCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGG-GCGGGGGGGCGGGGGGGCGGGGGGC 156
Query: 969 AXRVPAWXWXXRAXXGGXGGLXXGXKCXGXLGRGXGXWSCXR 844
GG GG G C G G G G C R
Sbjct: 157 G----GGGGGCGGGGGGCGG-GGGGGCGGGGGGGCGG-GCGR 192
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 37.5 bits (83), Expect = 0.023
Identities = 31/91 (34%), Positives = 31/91 (34%)
Frame = -3
Query: 1134 CGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*GVAXRVP 955
CG G G G CG G GG G G GG G G G G G G G
Sbjct: 79 CGGGCGGGGGG----CGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGG 134
Query: 954 AWXWXXRAXXGGXGGLXXGXKCXGXLGRGXG 862
GG GG G C G G G G
Sbjct: 135 GGGGCGGGSSGGCGGGSSGG-CGGGGGGGCG 164
Score = 36.3 bits (80), Expect = 0.053
Identities = 21/53 (39%), Positives = 21/53 (39%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG 979
GCG G G G CG G GG G GG GG G G G G G
Sbjct: 102 GCGGG-GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSG 153
Score = 35.9 bits (79), Expect = 0.071
Identities = 22/53 (41%), Positives = 22/53 (41%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG 979
GCG G G G CG G GG G GG GG G G G G G G
Sbjct: 96 GCGGGGGCGGGGG--GCGGGGGGC-GGGGGGCGGGGGGCGGGGGGGCGGGSSG 145
Score = 34.7 bits (76), Expect = 0.16
Identities = 28/92 (30%), Positives = 30/92 (32%), Gaps = 2/92 (2%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXR--G*GVAX 964
GCG G G + G G G G GG GG A G G G G G G A
Sbjct: 170 GCGGGSSGGGGYAVAPSGGGGCGGGGSSGG----GGYAVAPSGGGGCGGGGSSGGGGYAS 225
Query: 963 RVPAWXWXXRAXXGGXGGLXXGXKCXGXLGRG 868
+ GG GG G G G
Sbjct: 226 APSGGGGYATSGGGGSGGYATGGSSGGGYSSG 257
Score = 34.3 bits (75), Expect = 0.22
Identities = 34/95 (35%), Positives = 35/95 (36%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*GVAXRV 958
GCG G G G CG G GG G GG GG G G G G G G G
Sbjct: 89 GCGGG-GGGCGGG-GGCGGGGGGCGGGGGG--CGGGGGGCGGGGGGCGGGGGG-GCGGGS 143
Query: 957 PAWXWXXRAXXGGXGGLXXGXKCXGXLGRGXGXWS 853
+ GG GG G C G G G G S
Sbjct: 144 SGGCGGGSS--GGCGG-GGGGGCGGGGGGGCGGGS 175
Score = 31.9 bits (69), Expect = 1.1
Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGG--X*GXRGG*XWXGGXGXARXGRGVAGXGXRG*G 973
GCG G G CG G G G GG GG G G G G G G G
Sbjct: 123 GCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGG 179
Score = 30.7 bits (66), Expect = 2.7
Identities = 28/88 (31%), Positives = 28/88 (31%)
Frame = -3
Query: 1113 GAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*GVAXRVPAWXWXXR 934
G G CG G GG G GG G G G G G G A
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGG-GCAPPPAPCGGGCG 84
Query: 933 AXXGGXGGLXXGXKCXGXLGRGXGXWSC 850
GG GG G C G G G G C
Sbjct: 85 GGGGGCGG--GGGGCGGGGGCGGGGGGC 110
Score = 30.3 bits (65), Expect = 3.5
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 1137 GCGSXRGXG-AGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*G 973
GCG G G CG G GG G GG GG G VA G G G
Sbjct: 138 GCGGGSSGGCGGGSSGGCGGGGGGGCGGGGG-GGCGGGSSGGGGYAVAPSGGGGCG 192
Score = 29.5 bits (63), Expect = 6.1
Identities = 31/96 (32%), Positives = 31/96 (32%), Gaps = 2/96 (2%)
Frame = -3
Query: 1134 CGSXRGXGAGXXLXMCGAGXG--GX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*GVAXR 961
CG G G G CG G G GG GG G G G G G G G
Sbjct: 55 CGGGCGGGGGG----CGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCG-GGGGG 109
Query: 960 VPAWXWXXRAXXGGXGGLXXGXKCXGXLGRGXGXWS 853
GG GG G C G G G G S
Sbjct: 110 CGGGGGGCGGGGGGCGG--GGGGCGGGGGGGCGGGS 143
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 37.5 bits (83), Expect = 0.023
Identities = 31/91 (34%), Positives = 31/91 (34%)
Frame = -3
Query: 1134 CGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*GVAXRVP 955
CG G G G CG G GG G G GG G G G G G G G
Sbjct: 79 CGGGCGGGGGG----CGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGG 134
Query: 954 AWXWXXRAXXGGXGGLXXGXKCXGXLGRGXG 862
GG GG G C G G G G
Sbjct: 135 GGGGCGGGSSGGCGGGSSGG-CGGGGGGGCG 164
Score = 36.3 bits (80), Expect = 0.053
Identities = 21/53 (39%), Positives = 21/53 (39%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG 979
GCG G G G CG G GG G GG GG G G G G G
Sbjct: 102 GCGGG-GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSG 153
Score = 35.9 bits (79), Expect = 0.071
Identities = 22/53 (41%), Positives = 22/53 (41%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG 979
GCG G G G CG G GG G GG GG G G G G G G
Sbjct: 96 GCGGGGGCGGGGG--GCGGGGGGC-GGGGGGCGGGGGGCGGGGGGGCGGGSSG 145
Score = 34.7 bits (76), Expect = 0.16
Identities = 28/92 (30%), Positives = 30/92 (32%), Gaps = 2/92 (2%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXR--G*GVAX 964
GCG G G + G G G G GG GG A G G G G G G A
Sbjct: 170 GCGGGSSGGGGYAVAPSGGGGCGGGGSSGG----GGYAVAPSGGGGCGGGGSSGGGGYAS 225
Query: 963 RVPAWXWXXRAXXGGXGGLXXGXKCXGXLGRG 868
+ GG GG G G G
Sbjct: 226 APSGGGGYATSGGGGSGGYATGGSSGGGYSSG 257
Score = 34.3 bits (75), Expect = 0.22
Identities = 34/95 (35%), Positives = 35/95 (36%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*GVAXRV 958
GCG G G G CG G GG G GG GG G G G G G G G
Sbjct: 89 GCGGG-GGGCGGG-GGCGGGGGGCGGGGGG--CGGGGGGCGGGGGGCGGGGGG-GCGGGS 143
Query: 957 PAWXWXXRAXXGGXGGLXXGXKCXGXLGRGXGXWS 853
+ GG GG G C G G G G S
Sbjct: 144 SGGCGGGSS--GGCGG-GGGGGCGGGGGGGCGGGS 175
Score = 31.9 bits (69), Expect = 1.1
Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGG--X*GXRGG*XWXGGXGXARXGRGVAGXGXRG*G 973
GCG G G CG G G G GG GG G G G G G G G
Sbjct: 123 GCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGG 179
Score = 30.7 bits (66), Expect = 2.7
Identities = 28/88 (31%), Positives = 28/88 (31%)
Frame = -3
Query: 1113 GAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*GVAXRVPAWXWXXR 934
G G CG G GG G GG G G G G G G A
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGG-GCAPPPAPCGGGCG 84
Query: 933 AXXGGXGGLXXGXKCXGXLGRGXGXWSC 850
GG GG G C G G G G C
Sbjct: 85 GGGGGCGG--GGGGCGGGGGCGGGGGGC 110
Score = 30.3 bits (65), Expect = 3.5
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 1137 GCGSXRGXG-AGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*G 973
GCG G G CG G GG G GG GG G VA G G G
Sbjct: 138 GCGGGSSGGCGGGSSGGCGGGGGGGCGGGGG-GGCGGGSSGGGGYAVAPSGGGGCG 192
Score = 29.5 bits (63), Expect = 6.1
Identities = 31/96 (32%), Positives = 31/96 (32%), Gaps = 2/96 (2%)
Frame = -3
Query: 1134 CGSXRGXGAGXXLXMCGAGXG--GX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*GVAXR 961
CG G G G CG G G GG GG G G G G G G G
Sbjct: 55 CGGGCGGGGGG----CGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCG-GGGGG 109
Query: 960 VPAWXWXXRAXXGGXGGLXXGXKCXGXLGRGXGXWS 853
GG GG G C G G G G S
Sbjct: 110 CGGGGGGCGGGGGGCGG--GGGGCGGGGGGGCGGGS 143
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 36.7 bits (81), Expect = 0.040
Identities = 30/96 (31%), Positives = 37/96 (38%), Gaps = 2/96 (2%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*GVAXRV 958
G G+ G G G G GG G +GG GG G + +G G G +G G
Sbjct: 199 GPGAYGGPGGGGQGGYGGGNYGGGWGQQGG-GGQGGWGGPQQQQGGGGWGQQGGGGQG-- 255
Query: 957 PAWXWXXRAXXGGXGGLXXGXKCXGXLGRG--XGXW 856
W + GG GG G G G+G G W
Sbjct: 256 -GWGGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGGW 290
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 36.7 bits (81), Expect = 0.040
Identities = 30/96 (31%), Positives = 37/96 (38%), Gaps = 2/96 (2%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*GVAXRV 958
G G+ G G G G GG G +GG GG G + +G G G +G G
Sbjct: 237 GPGAYGGPGGGGQGGYGGGNYGGGWGQQGG-GGQGGWGGPQQQQGGGGWGQQGGGGQG-- 293
Query: 957 PAWXWXXRAXXGGXGGLXXGXKCXGXLGRG--XGXW 856
W + GG GG G G G+G G W
Sbjct: 294 -GWGGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGGW 328
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 35.5 bits (78), Expect = 0.093
Identities = 31/90 (34%), Positives = 31/90 (34%)
Frame = -3
Query: 1131 GSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*GVAXRVPA 952
G G G G G G GG G GG GG G G G G G G G R
Sbjct: 50 GGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGG--GNGGGGRGGGGGGGGGR-GG 106
Query: 951 WXWXXRAXXGGXGGLXXGXKCXGXLGRGXG 862
GG GG G G GRG G
Sbjct: 107 GGGGRGGGGGGGGGRGGGGGGRGGGGRGRG 136
Score = 33.5 bits (73), Expect = 0.38
Identities = 28/86 (32%), Positives = 29/86 (33%)
Frame = -3
Query: 1119 GXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*GVAXRVPAWXWX 940
G G G G G G G RGG G G G G G G G G
Sbjct: 47 GWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGG 106
Query: 939 XRAXXGGXGGLXXGXKCXGXLGRGXG 862
GG GG G + G GRG G
Sbjct: 107 GGGGRGGGGG-GGGGRGGGGGGRGGG 131
Score = 32.7 bits (71), Expect = 0.66
Identities = 23/61 (37%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -3
Query: 1152 WVAAXGCGSXRGXGAGXXLXMC-GAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG* 976
W G G+ G G G G G GG G GG GG G GRG G G G
Sbjct: 72 WGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGG 131
Query: 975 G 973
G
Sbjct: 132 G 132
Score = 30.7 bits (66), Expect = 2.7
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*G 973
G G G G G G GG G G GG G GRG G G G G
Sbjct: 61 GSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGG 115
Score = 30.7 bits (66), Expect = 2.7
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Frame = -3
Query: 1152 WVAAXGCGSXRGXGAGXXLXMCGAGXGGX*--GXRGG*XWXGGXGXARXGRGVAGXGXRG 979
W G G G G G G GG G GG GG G R G G G G G
Sbjct: 64 WGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGG 123
Query: 978 *G 973
G
Sbjct: 124 GG 125
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical protein
T28C6.1 protein.
Length = 281
Score = 35.1 bits (77), Expect = 0.12
Identities = 29/97 (29%), Positives = 31/97 (31%), Gaps = 3/97 (3%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*G---VA 967
G + G AG G G GG G RGG G G G G +G G G G
Sbjct: 40 GSDASAGASAGGTGGGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQDGG 99
Query: 966 XRVPAWXWXXRAXXGGXGGLXXGXKCXGXLGRGXGXW 856
W GG G G G G G W
Sbjct: 100 SSAGGWGGSQGGSQGGSSG-GWGGSSRSDSGSGQGGW 135
Score = 31.9 bits (69), Expect = 1.1
Identities = 29/89 (32%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Frame = -3
Query: 1131 GSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGR-GVAGXGXRG*GVAXRVP 955
GS G G G G+G GG G +GG GG G ++ G+ G G G G G
Sbjct: 115 GSSGGWG-GSSRSDSGSGQGGWGGQQGGNSNAGGWGGSQGGQNGGGGRGGSG-GQGGWGG 172
Query: 954 AWXWXXRAXXGGXGGLXXGXKCXGXLGRG 868
+ + GG G G G GRG
Sbjct: 173 SQDGGSQGGWGGQNGGGQGGNQGGGGGRG 201
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 33.5 bits (73), Expect = 0.38
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = -3
Query: 1155 RWVAAXGCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG* 976
RW G G G G G G G G GG GG G R G G G RG
Sbjct: 39 RWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGG 98
Query: 975 G 973
G
Sbjct: 99 G 99
Score = 32.3 bits (70), Expect = 0.87
Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXG-GX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*GVAXR 961
G G G G G G G G G GG W G G R G G G G G G R
Sbjct: 124 GWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGGG-GAGER 182
Query: 960 V 958
+
Sbjct: 183 I 183
Score = 31.5 bits (68), Expect = 1.5
Identities = 26/88 (29%), Positives = 26/88 (29%), Gaps = 2/88 (2%)
Frame = -3
Query: 1131 GSXRGXGAGXXLXMCGAGXGGX*GXRGG*X--WXGGXGXARXGRGVAGXGXRG*GVAXRV 958
G RG G G GG G G W G G GRG G G G G
Sbjct: 93 GGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSN 152
Query: 957 PAWXWXXRAXXGGXGGLXXGXKCXGXLG 874
W G GG G G G
Sbjct: 153 GGGDWGGNGGGGRGGGGGRGGGGGGGAG 180
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical protein
C27H5.3 protein.
Length = 448
Score = 33.1 bits (72), Expect = 0.50
Identities = 23/53 (43%), Positives = 23/53 (43%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG 979
G G G G G M G GG G RGG GG G GRG G G RG
Sbjct: 297 GRGGRGGFGGGRGGPM--GGRGGFGGDRGGYGGGGGRGGFDGGRG-GGGGFRG 346
Score = 29.5 bits (63), Expect = 6.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3
Query: 1086 GAGXGGX*GXRGG*XWXGGXGXARXG 1009
G G GG G RGG + GG G +R G
Sbjct: 88 GGGRGGFGGSRGGGGYDGGRGGSRGG 113
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical protein
F07C4.7 protein.
Length = 180
Score = 32.3 bits (70), Expect = 0.87
Identities = 20/53 (37%), Positives = 21/53 (39%)
Frame = -3
Query: 1131 GSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*G 973
G+ G G G G GG G RGG G G R G G G G G G
Sbjct: 97 GNGGGRGGNGGFDDNGGGRGGNGGGRGGTGGFGDNGGGRGGNG-GGRGGNGGG 148
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 32.3 bits (70), Expect = 0.87
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = -3
Query: 1122 RGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG 979
RG G G G G GG G RGG G R GRG G G RG
Sbjct: 7 RGGGGGFRGGRGGGGGGGFRGGRGG----DRGGGFRGGRGGFGGGGRG 50
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 32.3 bits (70), Expect = 0.87
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = -3
Query: 1131 GSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*G 973
G G G G G G GG G GG + GG G G G G G G
Sbjct: 75 GGGGGYGGGHGGAAVGGGYGGAVGGGGGGGYGGGHGGGHGGAVGGGYGGGGGG 127
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 32.3 bits (70), Expect = 0.87
Identities = 23/75 (30%), Positives = 26/75 (34%)
Frame = -3
Query: 1086 GAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*GVAXRVPAWXWXXRAXXGGXGGL 907
G+G G G GG G G G G+ G G G G GG GG+
Sbjct: 81 GSGGGAFGGFNGGYGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGM 140
Query: 906 XXGXKCXGXLGRGXG 862
G G G G G
Sbjct: 141 GGGPGGYGMGGYGGG 155
Score = 29.5 bits (63), Expect = 6.1
Identities = 27/89 (30%), Positives = 28/89 (31%), Gaps = 3/89 (3%)
Frame = -3
Query: 1119 GXGAGXXLXMCGAGXGGX*GXRGG---*XWXGGXGXARXGRGVAGXGXRG*GVAXRVPAW 949
G G G G G GG G GG + GG G G G G G G
Sbjct: 123 GDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGG 182
Query: 948 XWXXRAXXGGXGGLXXGXKCXGXLGRGXG 862
GG GG G G G G G
Sbjct: 183 YGGGGFGGGGMGGYGGGMGGGGYGGGGMG 211
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical protein
C56A3.1 protein.
Length = 393
Score = 31.5 bits (68), Expect = 1.5
Identities = 21/50 (42%), Positives = 21/50 (42%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXG 988
GCG G G G CG G GG G GG GG G G G G G
Sbjct: 89 GCG---GGGCGGGGGGCGGG-GGCGGGGGGGCGGGGGGGCGGGGGGGGGG 134
Score = 30.3 bits (65), Expect = 3.5
Identities = 19/47 (40%), Positives = 19/47 (40%)
Frame = -3
Query: 1113 GAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*G 973
G G CG G GG G GG GG G G G G G G G
Sbjct: 87 GGGCGGGGCGGGGGGC-GGGGGCGGGGGGGCGGGGGGGCGGGGGGGG 132
>Z68314-1|CAA92658.1| 102|Caenorhabditis elegans Hypothetical protein
F07H5.6 protein.
Length = 102
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/53 (37%), Positives = 22/53 (41%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG 979
GCG G +G G G GG G GG GG G G G+ G G G
Sbjct: 35 GCGGGFGGFSGGYGLGYGGGFGGYGGGFGG-YGLGGYGLGYGGYGMFGSGYGG 86
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 1040 QXQPPRXPYXPPXPAPHXXNXXPAPXPLXXPQPXAA 1147
Q P+ PP PAP+ PAP P P P A
Sbjct: 41 QSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHA 76
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein
R08B4.1b protein.
Length = 1160
Score = 30.7 bits (66), Expect = 2.7
Identities = 25/86 (29%), Positives = 26/86 (30%)
Frame = -3
Query: 1119 GXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*GVAXRVPAWXWX 940
G G G G G GG G GG G + G G G G G G A
Sbjct: 787 GGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGN 846
Query: 939 XRAXXGGXGGLXXGXKCXGXLGRGXG 862
A G G G G G G
Sbjct: 847 GGAGAGNGNGAGAGNGNGAGAGNGNG 872
Score = 30.7 bits (66), Expect = 2.7
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*GVA 967
G G G G G G+G GG GG GG G G G G G G A
Sbjct: 793 GNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGA 849
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.7 bits (66), Expect = 2.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 1049 PPRXPYXPPXPAPHXXNXXPAPXPLXXPQP 1138
PP PY PP P H P P P P
Sbjct: 271 PPHHPYGPPHPMHHPYAMMPPPFGFFPPPP 300
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.7 bits (66), Expect = 2.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 1049 PPRXPYXPPXPAPHXXNXXPAPXPLXXPQP 1138
PP PY PP P H P P P P
Sbjct: 271 PPHHPYGPPHPMHHPYAMMPPPFGFFPPPP 300
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 30.3 bits (65), Expect = 3.5
Identities = 24/60 (40%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGV---AGXGXRG*GVA 967
G G+ G GAG G G GG G GG GG G G+ V AG G G G A
Sbjct: 199 GSGAMGGGGAGAQSAYFGVG-GGPVGGGGGGAKSGGGGGGIPGQSVYMGAGGGGGGGGGA 257
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical protein
T01C3.7 protein.
Length = 352
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 1086 GAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG 979
G G GG G RGG G GRG G G RG
Sbjct: 9 GGGGGGFRGGRGGDRGGSRGGFGGGGRGGYGGGDRG 44
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 29.9 bits (64), Expect = 4.6
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGV---AGXGXRG*G 973
G G+ G GAG G G GG G GG GG G G+ V AG G G G
Sbjct: 305 GSGAMGGGGAGAQSAYFGVG-GGPVGGGGGGAKSGGGGGGIPGQSVYMGAGGGGGGGG 361
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -3
Query: 1086 GAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXGXRG*G 973
G G GG G G W GG G RG G G G G
Sbjct: 218 GGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRG 255
Score = 29.9 bits (64), Expect = 4.6
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = -3
Query: 1137 GCGSXRGXGAGXXLXMCGAGXGGX*GXRGG*XWXGGXGXARXGRGVAGXG 988
G G G G+G G G GG RGG W GG G G G G G
Sbjct: 220 GGGGGGGYGSGGG---WGGGGGGRDRDRGG--WGGGGGGRGYGGGGGGGG 264
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,208,476
Number of Sequences: 27780
Number of extensions: 171157
Number of successful extensions: 808
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4089824454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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