Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_J04
(890 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00052-1|AAK95880.2| 308|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AF040661-15|AAG24219.1| 174|Caenorhabditis elegans Hypothetical... 33 0.21
AL031627-2|CAA20953.1| 179|Caenorhabditis elegans Hypothetical ... 33 0.36
U58752-6|AAB00668.1| 308|Caenorhabditis elegans C-type lectin p... 32 0.48
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 32 0.63
AL031627-8|CAA20960.2| 222|Caenorhabditis elegans Hypothetical ... 32 0.63
U64848-13|AAY86245.1| 339|Caenorhabditis elegans Hypothetical p... 31 0.84
Z81542-2|CAB04416.1| 228|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z82070-7|CAB04909.1| 321|Caenorhabditis elegans Hypothetical pr... 29 4.5
AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical ... 29 5.9
Z81083-2|CAB03101.3| 646|Caenorhabditis elegans Hypothetical pr... 28 7.8
U64842-8|AAB37085.1| 173|Caenorhabditis elegans Hypothetical pr... 28 7.8
AL110484-28|CAB54395.2| 419|Caenorhabditis elegans Hypothetical... 28 7.8
>U00052-1|AAK95880.2| 308|Caenorhabditis elegans Hypothetical
protein K02F3.5 protein.
Length = 308
Score = 43.2 bits (97), Expect = 3e-04
Identities = 28/107 (26%), Positives = 51/107 (47%)
Frame = +3
Query: 210 WQEARLRCRLEGSVLASPLDAALKSSMLSLITNKKSSCGIYTGIHALFSKGDFRSIEGVP 389
W A +C G+ LAS + + L+ + + + I G++ + + FR+ +G P
Sbjct: 206 WYTASEKCIGYGAHLAS-IHSRLELGFVQRLVPVNQTAWI--GVNDIQKENVFRNSDGTP 262
Query: 390 LAKIPHDWADYEPDNAGGDQNCILMYPDGNFADVNCTDTFQYVCYKK 530
+ + W +PDN ++NC+ + G + D C T +VC KK
Sbjct: 263 VDF--YKWGKKQPDNQEHNENCVEVDHSGQWTDKLCIITRPFVCKKK 307
>AF040661-15|AAG24219.1| 174|Caenorhabditis elegans Hypothetical
protein W10G11.12 protein.
Length = 174
Score = 33.5 bits (73), Expect = 0.21
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 411 WADYEPDNAGGDQNCILMYPDGN-FADVNCTDTFQ-YVCYKKKT 536
W EP+NA G Q C +Y N DV C T Q Y+C K T
Sbjct: 130 WRAGEPNNALGGQGCAQVYSTTNDMDDVGCGSTNQGYICGKVAT 173
>AL031627-2|CAA20953.1| 179|Caenorhabditis elegans Hypothetical
protein Y102A5C.7 protein.
Length = 179
Score = 32.7 bits (71), Expect = 0.36
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 423 EPDNAGGDQNCILMYPDGNFADVNC--TDTFQYVCYK 527
EP+N GG + C+++ G +D C TD YVC K
Sbjct: 140 EPNNVGGTEQCLVLTWTGLMSDQTCARTDYVGYVCGK 176
>U58752-6|AAB00668.1| 308|Caenorhabditis elegans C-type lectin
protein 51 protein.
Length = 308
Score = 32.3 bits (70), Expect = 0.48
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 4/87 (4%)
Frame = +3
Query: 441 GDQNCI-LMYPDGNFADVNCTDTFQYVCYKKKTSTVAMSSC---GSVDSEYTLSXETGNC 608
GD C+ L + NCT ++C + T S S YT ET C
Sbjct: 120 GDTACMQLQTGTAKWQTTNCTAQLPFICSYSSSVTPTCPSVTIPSHCPSGYTWYDETDFC 179
Query: 609 YKFHKVPRTWSRAYMTCLAEGGYLTII 689
YK +++ A +C A+GG L I
Sbjct: 180 YKNTVRFTSFNDARSSCQADGGDLASI 206
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 525 KKKTSTVAMSSCGSVDSEYTLSXETGNCYKFHKVPRTWSRAYMTCLAE--GGYLTII 689
+ ++ V M S DS +T S G CYK TW A C ++ G +LT +
Sbjct: 71 ESSSNLVLMDSTTPCDSGWTKSTVNGMCYKIATADTTWYAAEDWCYSQRYGSHLTSV 127
>AL031627-8|CAA20960.2| 222|Caenorhabditis elegans Hypothetical
protein Y102A5C.17 protein.
Length = 222
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 423 EPDNAGGDQNCILMYPDGNFADVNC--TDTFQYVCYK 527
EP+N GG + C+++ G +D C TD YVC K
Sbjct: 183 EPNNVGGMEQCLVLTWTGLMSDQTCARTDYVGYVCGK 219
>U64848-13|AAY86245.1| 339|Caenorhabditis elegans Hypothetical
protein C50E3.15 protein.
Length = 339
Score = 31.5 bits (68), Expect = 0.84
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +3
Query: 396 KIPHDWADYEPDNAGGDQNCILMY--PDGNFADVNCTDTFQYVCYKKKTSTVAMSSCGSV 569
K ++W D EP+ GG + C+ +Y PD D YV + K + + GSV
Sbjct: 153 KAGYNWDDGEPNGIGGRRFCLYLYIEPDIKSEMHGKVDDTAYVAFWKPNESCYLCEWGSV 212
>Z81542-2|CAB04416.1| 228|Caenorhabditis elegans Hypothetical
protein F49A5.3 protein.
Length = 228
Score = 31.1 bits (67), Expect = 1.1
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 4/99 (4%)
Frame = +3
Query: 405 HDWADYEPDNAGGDQNCILMYPDG----NFADVNCTDTFQYVCYKKKTSTVAMSSCGSVD 572
H++A+ P+N GD CI G N+A+ +CT+T +VC + +TV +C
Sbjct: 59 HNFAEDHPNNEYGD--CIYYMTTGTQAGNWANGSCTETMSFVC--ELPATVYDKNCKYNY 114
Query: 573 SEYTLSXETGNCYKFHKVPRTWSRAYMTCLAEGGYLTII 689
Y CY + T A C + G LT I
Sbjct: 115 ENY--------CYTPYNQLETSRDAKNFCASSGSNLTSI 145
>Z82070-7|CAB04909.1| 321|Caenorhabditis elegans Hypothetical
protein W04E12.8 protein.
Length = 321
Score = 29.1 bits (62), Expect = 4.5
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Frame = +3
Query: 201 PAIWQEARLRCRLEGSVLASPLDAALKSSMLSLITN--KKSSCGIY-TGIHALFSKGDFR 371
PA ++ A +C L G LAS + + + S N K+S+ Y G + L + G ++
Sbjct: 40 PAQFEFAEEQCNLLGGHLASVQNGQENALLQSNAANSFKRSNYSDYWIGANDLETSGTWK 99
Query: 372 SIEGVPLAKIPHDWADYEPDNAGGDQNCILMYP-DGNFADVNCTDTFQYVC 521
+ + D+++++ +C + DG ++ + CT YVC
Sbjct: 100 WTD----PSVTFDYSNWQLGEPQSGSDCAIQDKGDGTWSAIGCTSYRPYVC 146
>AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical
protein H24K24.4 protein.
Length = 603
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 239 GRICIGFTSGRCFKKQHAV 295
G IC+GF GR K QH V
Sbjct: 200 GEICVGFVGGRFSKNQHFV 218
>Z81083-2|CAB03101.3| 646|Caenorhabditis elegans Hypothetical
protein F44F1.3 protein.
Length = 646
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 321 CGIYTGIHALFSKGDFRSIEGVPLAKIP 404
CG Y GIH S F ++ G P+ IP
Sbjct: 210 CGNYKGIHGFQSLSAFSALTGSPVLLIP 237
>U64842-8|AAB37085.1| 173|Caenorhabditis elegans Hypothetical
protein F25B4.9 protein.
Length = 173
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = +3
Query: 543 VAMSSCGSVDSEYTLSXETGNCYKFHKVPRTWSRAYMTCLAEGGYLTIIXXXQRLRSFXE 722
V CG DS + +T +CYK W+ A CL +G + I + + E
Sbjct: 18 VLADPCG--DSNWRYFPQTNSCYKLIDENLPWTIAEFKCLFQGAHHVSIDSPEENQFVHE 75
Query: 723 L 725
L
Sbjct: 76 L 76
>AL110484-28|CAB54395.2| 419|Caenorhabditis elegans Hypothetical
protein Y38E10A.4 protein.
Length = 419
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 579 YTLSXETGNCYKFHKVPRTWSRAYMTCLAEGG 674
YTL C + K P T A +TCL GG
Sbjct: 27 YTL-VNNNKCLRLFKTPETHKTAELTCLKNGG 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,327,695
Number of Sequences: 27780
Number of extensions: 350477
Number of successful extensions: 866
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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