Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_J02
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0998 - 21555696-21556080,21556177-21556254,21556333-215564...    30   2.1  
03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111...    29   4.9  
07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166           28   8.5  
07_01_0370 + 2749353-2749786,2749949-2750346,2750435-2750519,275...    28   8.5  

>04_03_0998 - 21555696-21556080,21556177-21556254,21556333-21556424,
            21556524-21556620,21557113-21557141,21557620-21557781,
            21557981-21558061,21558156-21558314,21558394-21558510,
            21558598-21558666,21558753-21558831,21560884-21561050,
            21561109-21561229,21561522-21561649,21562293-21562361,
            21562408-21562539,21562619-21562991,21563274-21563398,
            21563500-21563655,21563785-21564198,21564634-21564691,
            21566522-21566648,21568047-21568305,21569005-21569104,
            21569231-21569317,21569454-21569692,21569914-21569999,
            21570409-21570532,21571111-21574332
          Length = 2444

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -2

Query: 409  RRAAPRSRECGSRSDSARARLRCLERXPAEAALSLWRSLKS 287
            R ++ R R+ G    SA  R++ LER  A +    WRSL++
Sbjct: 1401 RASSSRRRQLGRSLRSAACRIQGLERLQAPSIEKAWRSLRN 1441


>03_01_0141 +
           1116833-1117082,1117658-1118574,1119417-1119579,
           1119668-1120497,1120562-1120570
          Length = 722

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -3

Query: 414 CDAELLPEAGNAGPGQTQPV 355
           C A LLPE GN G GQ+  V
Sbjct: 486 CSATLLPEEGNTGDGQSPKV 505


>07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166
          Length = 545

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 215 SVRVHCEAAGLSPRTCRHVST 153
           S+R+HC A  L+PR CR   T
Sbjct: 401 SLRLHCPAPLLAPRKCRETCT 421


>07_01_0370 +
           2749353-2749786,2749949-2750346,2750435-2750519,
           2751200-2751314,2751538-2751591
          Length = 361

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 272 AEHVLVVAGERDLQGGPGGSVRVHCEAAGLSP-RTCRH 162
           A  V++ AG R   GG GG V VH  AA  SP  T RH
Sbjct: 17  AASVVIAAGPR--YGGGGGGVHVHPWAAFPSPTATTRH 52


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,184,239
Number of Sequences: 37544
Number of extensions: 244317
Number of successful extensions: 856
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)