Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_I24
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0617 + 21256745-21256943,21257454-21257647,21257836-212580...    29   5.2  
01_01_0433 + 3282195-3285185                                           29   5.2  

>12_02_0617 +
           21256745-21256943,21257454-21257647,21257836-21258042,
           21258115-21258232,21258325-21258401,21258513-21258692,
           21259312-21259356,21260309-21260413,21261115-21261261
          Length = 423

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 669 RFPPGSSLVRXPVPTLPLTGYCPP 740
           RF P S+  R P P LPL  + PP
Sbjct: 8   RFSPSSNPARPPPPRLPLPRFLPP 31


>01_01_0433 + 3282195-3285185
          Length = 996

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 648 QXYKDTRRFPPGSSLVRXPVPTLPLTGYCP 737
           + Y D   FPP SSL++  V     +GY P
Sbjct: 309 EVYGDLPNFPPNSSLIKLHVSGTKFSGYIP 338


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,251,533
Number of Sequences: 37544
Number of extensions: 409610
Number of successful extensions: 965
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)