Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_I19
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0197 - 26641356-26642188,26642312-26642398,26643373-266434...    29   3.7  
02_04_0602 - 24259703-24259918,24261663-24261821                       29   4.9  

>02_05_0197 -
           26641356-26642188,26642312-26642398,26643373-26643452,
           26643948-26644120,26644227-26644308,26644623-26644758,
           26644777-26644833,26644905-26645120,26645939-26646335,
           26646458-26646544,26647063-26647324,26648892-26648972,
           26649176-26650350
          Length = 1221

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 292 RXPSSRYGSCSSWTCHGXXRARPDXP 215
           R P+S YGSC++W+       RP  P
Sbjct: 625 RRPASSYGSCAAWSAGSLTDHRPASP 650


>02_04_0602 - 24259703-24259918,24261663-24261821
          Length = 124

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = +2

Query: 311 TGTGAAKAPVRAKTATLSAPTSXTDDITKAAKCAKKIYKRHRFDAWYGWKNHXQGSLPDI 490
           + + +A APV A  A    P   +      A+ A    +R R+DA   W+    G  PDI
Sbjct: 8   SASASAAAPVAAAAAA-PGPLGASVASVSLARAAVPSRRRRRWDALVEWEKPKPGRRPDI 66


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,948,073
Number of Sequences: 37544
Number of extensions: 170727
Number of successful extensions: 365
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 365
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)