Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_I12
         (895 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           27   0.23 
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    26   0.40 
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    25   1.2  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   6.6  

>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 27.1 bits (57), Expect = 0.23
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 618 NSRGCDQSCRXIGFPGGVCVXGRCPC 695
           N   C  +C  +G  GG C  G C C
Sbjct: 31  NDSACAANCHSLGKAGGHCEKGVCIC 56



 Score = 25.4 bits (53), Expect = 0.71
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 220 TACDXLCRELGFPSGACDGEQCVC 291
           +AC   C  LG   G C+   C+C
Sbjct: 33  SACAANCHSLGKAGGHCEKGVCIC 56



 Score = 25.4 bits (53), Expect = 0.71
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 505 CDQSCRRIGFPGGVCVNGRCKC 570
           C  +C  +G  GG C  G C C
Sbjct: 35  CAANCHSLGKAGGHCEKGVCIC 56



 Score = 21.8 bits (44), Expect = 8.7
 Identities = 12/38 (31%), Positives = 15/38 (39%)
 Frame = +3

Query: 723 DLDEDRSSLNDCXIRGCDQSCRXXGFPXGVCVXGRCQC 836
           DL   +  +ND     C  +C   G   G C  G C C
Sbjct: 22  DLLSFKGQVNDS---ACAANCHSLGKAGGHCEKGVCIC 56


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 618 NSRGCDQSCRXIGFPGGVCVXGRCPC 695
           N   C  +C  +G  GG C  G C C
Sbjct: 56  NDSACAANCLSLGKAGGHCEKGVCIC 81



 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 220 TACDXLCRELGFPSGACDGEQCVC 291
           +AC   C  LG   G C+   C+C
Sbjct: 58  SACAANCLSLGKAGGHCEKGVCIC 81



 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 505 CDQSCRRIGFPGGVCVNGRCKC 570
           C  +C  +G  GG C  G C C
Sbjct: 60  CAANCLSLGKAGGHCEKGVCIC 81


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 220 TACDXLCRELGFPSGACDGEQCVC 291
           +AC   C  LG   G C+   C+C
Sbjct: 58  SACAANCLSLGKAGGHCEKVGCIC 81



 Score = 23.0 bits (47), Expect = 3.8
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = +3

Query: 618 NSRGCDQSCRXIGFPGGVCVXGRCPC 695
           N   C  +C  +G  GG C    C C
Sbjct: 56  NDSACAANCLSLGKAGGHCEKVGCIC 81


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 275 PSHAPLGNPSSRQSXSQAVKSQLRN 201
           P H   GNP  +Q  ++  + Q  N
Sbjct: 105 PQHVVYGNPQQQQLAAETQQQQQHN 129


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,030
Number of Sequences: 438
Number of extensions: 4293
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)