Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_I08
         (875 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024756-6|AAK29881.1|  105|Caenorhabditis elegans Glutaredoxin ...    75   9e-14
U40945-3|AAA81721.2|  146|Caenorhabditis elegans Hypothetical pr...    60   2e-09
AC006831-3|ABD63200.1|   96|Caenorhabditis elegans Hypothetical ...    46   3e-05
AC006831-2|AAF39994.2|  119|Caenorhabditis elegans Hypothetical ...    46   3e-05
Z82082-4|CAE45093.1|  210|Caenorhabditis elegans Hypothetical pr...    39   0.004
U58751-6|AAZ82854.1|  131|Caenorhabditis elegans Hypothetical pr...    34   0.12 
U61947-1|AAB03136.3|  667|Caenorhabditis elegans Thioredoxin red...    31   0.82 
AF148217-1|AAD41826.1|  667|Caenorhabditis elegans thioredoxin r...    31   0.82 
AF125951-5|AAL27238.1|  345|Caenorhabditis elegans Hypothetical ...    30   2.5  
Z98866-2|CAB11547.1|  142|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>AC024756-6|AAK29881.1|  105|Caenorhabditis elegans Glutaredoxin
           protein 10 protein.
          Length = 105

 Score = 74.5 bits (175), Expect = 9e-14
 Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
 Frame = +2

Query: 194 YCPYCKLAKDVFEKVK---QPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVG 364
           YCPYC  A+   E V      ++ IE++ER D N IQD L  LTG R+VP+VFING   G
Sbjct: 22  YCPYCHKARAALESVNVKPDALQWIEIDERKDCNEIQDYLGSLTGARSVPRVFINGKFFG 81

Query: 365 GGSDVKALYESGKLEPML 418
           GG D  A  ++GKL  +L
Sbjct: 82  GGDDTAAGAKNGKLAALL 99


>U40945-3|AAA81721.2|  146|Caenorhabditis elegans Hypothetical
           protein F10D7.3 protein.
          Length = 146

 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = +2

Query: 194 YCPYCKLAKDVFEKVK-QPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGG 370
           YCP+ K  K +    +   +K++EL+  +    +Q+ L + +G  TVPQ+FI+G  VGG 
Sbjct: 53  YCPWSKRLKAILANYEIDDMKIVELDRSNQTEEMQEILKKYSGRTTVPQLFISGKFVGGH 112

Query: 371 SDVKALYESGKLEPML 418
            + KA+ E G+L P+L
Sbjct: 113 DETKAIEEKGELRPLL 128


>AC006831-3|ABD63200.1|   96|Caenorhabditis elegans Hypothetical
           protein ZK121.1b protein.
          Length = 96

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
 Frame = +2

Query: 197 CPYCKLAKDVFEKVKQPIKVIELN-----ERDDGNTIQDNLAQLTGFRTVPQVFINGNCV 361
           C +C  AKD+F  V+   K + L+     + DD   I + L   T   +VPQ+F+ G  +
Sbjct: 7   CTFCNRAKDLFSDVRVAYKEVNLDTLKASQPDDYLGIVNGLVYTTRQTSVPQIFVCGRFI 66

Query: 362 GGGSDVKALYESGKL 406
           GG +++ AL  SG L
Sbjct: 67  GGYTELDALRNSGHL 81


>AC006831-2|AAF39994.2|  119|Caenorhabditis elegans Hypothetical
           protein ZK121.1a protein.
          Length = 119

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
 Frame = +2

Query: 197 CPYCKLAKDVFEKVKQPIKVIELN-----ERDDGNTIQDNLAQLTGFRTVPQVFINGNCV 361
           C +C  AKD+F  V+   K + L+     + DD   I + L   T   +VPQ+F+ G  +
Sbjct: 30  CTFCNRAKDLFSDVRVAYKEVNLDTLKASQPDDYLGIVNGLVYTTRQTSVPQIFVCGRFI 89

Query: 362 GGGSDVKALYESGKL 406
           GG +++ AL  SG L
Sbjct: 90  GGYTELDALRNSGHL 104


>Z82082-4|CAE45093.1|  210|Caenorhabditis elegans Hypothetical
           protein ZC334.7 protein.
          Length = 210

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
 Frame = +2

Query: 197 CPYCKLAKDVFEKVKQ--PIKVIEL-NERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGG 367
           C  C+ AK +        P   +EL  + D    +Q +L ++T   T P VF+ GN +GG
Sbjct: 126 CVPCQRAKHLLATTYGDIPSHFLELVGDEDWQRQLQVDLLKVTRQATFPYVFVCGNFIGG 185

Query: 368 GSDVKALYESGKLEPML 418
            SD+  ++ SG+L   L
Sbjct: 186 SSDLFNMHHSGQLRQAL 202


>U58751-6|AAZ82854.1|  131|Caenorhabditis elegans Hypothetical
           protein C07G1.8 protein.
          Length = 131

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
 Frame = +2

Query: 197 CPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQD------NLAQLTGFRTVPQVFINGNC 358
           C YC  AK+  E  +  I   E N       I +       L  LT  RTVPQ+FI G  
Sbjct: 37  CGYCVKAKN--ELYEDGIHYTEKNLNTVSKVIPNPQEYIQGLMDLTRQRTVPQIFICGKF 94

Query: 359 VGGGSDVKAL 388
           VGG +++ AL
Sbjct: 95  VGGYTELNAL 104


>U61947-1|AAB03136.3|  667|Caenorhabditis elegans Thioredoxin
           reductase protein 1 protein.
          Length = 667

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +2

Query: 239 KQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKAL 388
           ++P+++ E+ +       Q  +  LT   + P ++I GN VGG  ++KAL
Sbjct: 110 EKPLEIPEIKKLQVSRASQKVIQYLTLHTSWPLMYIKGNAVGGLKELKAL 159


>AF148217-1|AAD41826.1|  667|Caenorhabditis elegans thioredoxin
           reductase protein.
          Length = 667

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +2

Query: 239 KQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKAL 388
           ++P+++ E+ +       Q  +  LT   + P ++I GN VGG  ++KAL
Sbjct: 110 EKPLEIPEIKKLQVSRASQKVIQYLTLHTSWPLMYIKGNAVGGLKELKAL 159


>AF125951-5|AAL27238.1|  345|Caenorhabditis elegans Hypothetical
           protein D2063.3a protein.
          Length = 345

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/62 (22%), Positives = 31/62 (50%)
 Frame = +2

Query: 197 CPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSD 376
           C + +   D+  K +      ++ E ++   ++  L + + + T PQ++++G  VGG   
Sbjct: 269 CGFSRTIVDLLNKARADYHTFDILEDEE---VRQGLKKFSNWPTYPQLYLDGELVGGLDV 325

Query: 377 VK 382
           VK
Sbjct: 326 VK 327


>Z98866-2|CAB11547.1|  142|Caenorhabditis elegans Hypothetical
           protein Y49E10.2 protein.
          Length = 142

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 326 TVPQVFINGNCVGGGSDVKALYESGKLEPML 418
           T+PQV++ G  VGG   + ++++ G++   L
Sbjct: 100 TIPQVYVKGEFVGGCDILISMHKDGEISDFL 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,145,972
Number of Sequences: 27780
Number of extensions: 214743
Number of successful extensions: 552
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)