Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_I01
(869 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 1.6
07_03_1160 - 24430240-24431268 30 2.1
07_01_0080 + 587674-588510 30 2.1
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.8
11_06_0146 + 20621730-20621865,20621947-20622026,20622600-206226... 29 3.7
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 4.8
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 6.4
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 8.5
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 28 8.5
06_01_0486 - 3455030-3455770 28 8.5
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 773 PPXXXPXXXRXXXPPXPXPXXPXXPPXXPXP 865
PP P PP P P P PP P P
Sbjct: 93 PPPPPPYGVNSSQPPPPPPPPPSPPPSAPPP 123
>07_03_1160 - 24430240-24431268
Length = 342
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 767 PXPPXXXPXXXRXXXPPXPXPXXPXXPPXXPXP 865
P P P + PP P P P PP P P
Sbjct: 74 PLPNPDVPPMNKPDVPPMPKPDGPPIPPVQPCP 106
>07_01_0080 + 587674-588510
Length = 278
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 773 PPXXXPXXXRXXXPPXPXPXXPXXPPXXPXP 865
PP P PP P P P PP P P
Sbjct: 91 PPPPPPPPPSSGSPPPPPPPPPPPPPPPPPP 121
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 767 PXPPXXXPXXXRXXXPPXPXPXXPXXPPXXP 859
P PP P PP P P P PP P
Sbjct: 91 PPPPPPPPPSSGSPPPPPPPPPPPPPPPPPP 121
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/79 (25%), Positives = 24/79 (30%)
Frame = +2
Query: 629 STPSXXSSXXVRXPXXXXXXPXRLSXXXXPSPLXPXXXXXXXXXXXPXPPXXXPXXXRXX 808
S P ++ V P P + + P P P P PP P
Sbjct: 298 SRPQSIAAAAVASPAPPPPPPPKPAAAAPPPPPPPKAAPP------PPPPKGPPPPPPAK 351
Query: 809 XPPXPXPXXPXXPPXXPXP 865
PP P P PP P P
Sbjct: 352 GPPPPPPPKGPSPPPPPPP 370
>11_06_0146 +
20621730-20621865,20621947-20622026,20622600-20622686,
20622789-20622866,20622947-20623038,20623132-20623333,
20623644-20623734,20624163-20624221,20624413-20624561,
20624662-20624743,20624828-20625214
Length = 480
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 426 SRRPP*LXXSPPGPKXPGAVSLAG*LTAVIIEXLSVVTGF 307
+R PP L PP P+ P V L G A + LS+ + F
Sbjct: 2 ARAPPPLSSLPPPPRRPTVVLLLGLALAFCLAVLSIQSSF 41
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 767 PXPPXXXPXXXRXXXPPXPXPXXPXXPPXXPXP 865
P P P PP P P P PP P P
Sbjct: 1166 PATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAP 1198
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/82 (23%), Positives = 24/82 (29%), Gaps = 3/82 (3%)
Frame = +2
Query: 629 STPSXXSSXXVRXPXXXXXXPXRLSXXXXPSPLXPXXXXXXXXXXXPXPPXXXPXXXRXX 808
S+P+ + + P P P+P P PP P
Sbjct: 41 SSPTQTTLQQLHSPDSPPPPPLPTPTVTTPTPPPPPPAPRPPRRHHRIPPPPPPLLPTPP 100
Query: 809 XPPX---PXPXXPXXPPXXPXP 865
PP P P P PP P P
Sbjct: 101 PPPASISPTPAPPLPPPPAPAP 122
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/54 (29%), Positives = 16/54 (29%), Gaps = 4/54 (7%)
Frame = +2
Query: 716 PSPLXPXXXXXXXXXXXPXPPXXXPXXXRXXXPPXPXP----XXPXXPPXXPXP 865
P P P P PP P PP P P P PP P P
Sbjct: 619 PPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPP 672
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 767 PXPPXXXPXXXRXXXPPXPXPXXPXXPPXXPXP 865
P PP P PP P P P PP P P
Sbjct: 425 PPPPPLPPPPP--PPPPPPPPLPPNMPPPLPPP 455
>06_01_0486 - 3455030-3455770
Length = 246
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 767 PXPPXXXPXXXRXXXPPXPXPXXPXXPPXXPXP 865
P PP P P P P P PP P P
Sbjct: 107 PTPPYVPPYIPPPTPPYVPPPTPPSPPPYVPPP 139
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 767 PXPPXXXPXXXRXXXPPXPXPXXPXXPPXXPXP 865
P PP P P P P P PP P P
Sbjct: 119 PTPPYVPPPTPPSPPPYVPPPTPPSPPPYVPPP 151
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,989,919
Number of Sequences: 37544
Number of extensions: 315734
Number of successful extensions: 1250
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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