Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_H24
(912 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces p... 154 1e-38
SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces p... 48 2e-06
SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyc... 35 0.014
SPBC1348.07 |||S. pombe specific DUF999 protein family 6|Schizos... 27 3.7
SPAC977.06 |||S. pombe specific DUF999 family protein 3|Schizosa... 27 4.9
SPBPB2B2.07c |||S. pombe specific DUF999 protein family 7|Schizo... 27 4.9
SPBPB2B2.14c |||S. pombe specific DUF999 protein family 8|Schizo... 27 4.9
SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+, L-... 26 6.5
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 26 6.5
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 6.5
>SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 525
Score = 154 bits (374), Expect = 1e-38
Identities = 84/153 (54%), Positives = 99/153 (64%), Gaps = 1/153 (0%)
Frame = +1
Query: 352 DNLPPILNALEVQ-NRSPRLVLEVAQHLGENXVRTIAMDGTEGLVRGQPVLDSGSPIRIP 528
D+LP ILNALEV+ + RLVLEVAQH+GEN VRTIAMDGTEGLVRG V+D+GSPI IP
Sbjct: 73 DSLPSILNALEVKLPDNKRLVLEVAQHVGENTVRTIAMDGTEGLVRGTAVIDTGSPISIP 132
Query: 529 VGAETLGRIIXVIGEPIDERGPIPTDKTAAIHAEAPXFVDMSVQQEXLVXGIXVVHLLAX 708
VG TLGRI+ VIGEP+DERGPI K + IHA+AP F + S E L GI VV LLA
Sbjct: 133 VGPGTLGRIMNVIGEPVDERGPIKAVKYSPIHADAPSFEEQSTTPEILETGIKVVDLLAP 192
Query: 709 MPXVXXLGCLADLVWAPLYXLXXXIXXVXQXHG 807
+G + I + + HG
Sbjct: 193 YARGGKIGLFGGAGVGKTVFIQELINNIAKAHG 225
>SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 48.0 bits (109), Expect = 2e-06
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 466 GTEGLVR-GQPVLDSGSPIRIPVGAETLGRIIXVIGEPIDERGPIPTDKTAAIHAEAPXF 642
G + LVR G+ V + + +PVG LGR++ +G PID +GPI T + + +AP
Sbjct: 105 GNDRLVREGEVVKRTRHIVDVPVGEALLGRVVDALGNPIDGKGPIKTTERRRVQLKAPGI 164
Query: 643 VDMSVQQEXLVXGIXVV 693
+ + E + G+ +
Sbjct: 165 LPRTSVCEPMQTGLKAI 181
>SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 503
Score = 35.1 bits (77), Expect = 0.014
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 409 VLEVAQHLGENXVRTIAMDGTEGL-VRGQPVLDSGSPIRIPVGAETLGRIIXVIGEPIDE 585
VLEVA H V +GT G+ VR + +G +RIPV + LGR+ G PID
Sbjct: 63 VLEVAGHKAIVQV----FEGTSGVDVRKTTIDFTGHSMRIPVSEDMLGRVFNGSGLPID- 117
Query: 586 RGP 594
+GP
Sbjct: 118 KGP 120
>SPBC1348.07 |||S. pombe specific DUF999 protein family
6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 230
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 159 NIFENLVERQQSRIELVTENHKFF 88
N+F N+V+ Q+ +I + T+ KFF
Sbjct: 26 NLFTNIVKPQKDKINIKTDKIKFF 49
>SPAC977.06 |||S. pombe specific DUF999 family protein
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 189
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -1
Query: 159 NIFENLVERQQSRIELVTENHKFF 88
N+F N+++ Q+ +I + T+ KFF
Sbjct: 26 NLFTNIIKPQKDKINIKTDKIKFF 49
>SPBPB2B2.07c |||S. pombe specific DUF999 protein family
7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 165
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -1
Query: 159 NIFENLVERQQSRIELVTENHKFF 88
N+F N+++ Q+ +I + T+ KFF
Sbjct: 46 NLFTNIIKPQKDKINIKTDKIKFF 69
>SPBPB2B2.14c |||S. pombe specific DUF999 protein family
8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 230
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -1
Query: 159 NIFENLVERQQSRIELVTENHKFF 88
N+F N+++ Q+ +I + T+ KFF
Sbjct: 26 NLFTNIIKPQKDKINIKTDKIKFF 49
>SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+,
L-lysine forming] |Schizosaccharomyces pombe|chr
1|||Manual
Length = 368
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 379 GHLGSAASCLQTEHPLRHQ*RQLP 308
G GSA SCL H L H +Q P
Sbjct: 140 GFAGSAISCLVWAHQLLHPNKQFP 163
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -2
Query: 599 GMGPRSSIGSPITXMMRPRVSAPTGIRMGEPESSTGCPRTKPSVPSMA 456
G G ++S+GS + R+ PT MG S+ G T P+ A
Sbjct: 487 GHGSQTSLGSIKRKSIMERMGRPTSPFMGSSFSNMGSRSTSPTKEGFA 534
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 593 GPRSSIGSPITXMMRPRVSA-PTGIRMGEPESSTGCPRTKPSVPSM 459
G R++ G+P R+++ PT I PES K S PS+
Sbjct: 154 GKRTAPGNPWAIRSAERLASNPTSIGTSSPESIDNNSNNKKSAPSL 199
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,884,874
Number of Sequences: 5004
Number of extensions: 54078
Number of successful extensions: 125
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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