Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_H19
         (843 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical pr...    55   6e-08
Z81570-3|CAB04603.1|  351|Caenorhabditis elegans Hypothetical pr...    53   2e-07
AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical ...    52   4e-07
Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical pr...    51   9e-07
Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical pr...    51   1e-06
U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol dehydro...    38   0.012
AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical ...    38   0.012
AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical ...    34   0.11 
AY314779-1|AAQ84886.1|  454|Caenorhabditis elegans secretin rece...    30   1.8  
AL031620-2|CAA20927.2|  454|Caenorhabditis elegans Hypothetical ...    30   1.8  
Z81122-6|CAB03358.1|  663|Caenorhabditis elegans Hypothetical pr...    29   4.1  
L23648-15|AAM48526.1|  511|Caenorhabditis elegans Dipeptidyl pep...    28   9.5  
L23648-13|AAM48525.1|  740|Caenorhabditis elegans Dipeptidyl pep...    28   9.5  

>Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical
           protein K12G11.3 protein.
          Length = 349

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 28/72 (38%), Positives = 44/72 (61%)
 Frame = +1

Query: 106 AVVFDGKTLTLKYXNKYPLPKXENDXDVIVKVEYSGICGTDLHIVQGEFPASKERPLPLG 285
           A+VFD     L+   + P+P   +D +++VK+EYSGIC +DLH+  G+       PL  G
Sbjct: 11  ALVFDTWNGPLEV-RQVPVPSPADD-EILVKIEYSGICHSDLHVWLGDLKDMSVCPLVGG 68

Query: 286 HEFSGTITDVGK 321
           HE +G++  +GK
Sbjct: 69  HEGAGSVVQIGK 80


>Z81570-3|CAB04603.1|  351|Caenorhabditis elegans Hypothetical
           protein K12G11.4 protein.
          Length = 351

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 22/49 (44%), Positives = 34/49 (69%)
 Frame = +1

Query: 178 DXDVIVKVEYSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGKK 324
           + +++VK+EYSGIC +DLH  +G+F  +   PL  GHE +GT+  +G K
Sbjct: 34  ENELLVKIEYSGICHSDLHTWEGDFEYASICPLIGGHEGAGTVVTIGSK 82


>AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical
           protein D2063.1 protein.
          Length = 326

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
 Frame = +1

Query: 106 AVVFD--GKTLTLKYXNKYPLPKXENDXDVIVKVEYSGICGTDLHIVQGEFPASKERPLP 279
           A++F+  G  L +K   + P+P+  N+ +++VK+EYSGIC +D+H   G+F    + P+ 
Sbjct: 12  ALIFESYGGPLEIK---QLPIPQP-NEDELLVKMEYSGICHSDVHTWLGDFHYVSKCPMI 67

Query: 280 LGHEFSGTITDVGKK 324
            GHE +G++  VG K
Sbjct: 68  GGHEGAGSVISVGSK 82


>Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.6 protein.
          Length = 347

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
 Frame = +2

Query: 314 LGRSLSSXK-GQKVVVDPNRACSLCDFCRKGKYQYCLTAGINXTVGIWRDGGWAQYVKVP 490
           +G  +   K G ++ ++P   C LC+ C+ G+Y  C       T  +  +G  +++V   
Sbjct: 75  IGSEVKGFKVGDRIAMEPGLPCKLCEHCKIGRYNLCPDMRFFATPPV--NGALSRFVVHD 132

Query: 491 QDQVYLLPDGVSTXPGGLCXPYSCVAHGYXRASPLLVXXKILIXXXGXIG 640
            D  + LPD +S   G L  P S VA    R   + +  KIL+   G IG
Sbjct: 133 ADFCFKLPDNLSFEDGALLEPLS-VAIQACRRGTVQMGQKILVLGAGPIG 181



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
 Frame = +1

Query: 187 VIVKVEYSGICGTDLH-IVQGEFPA-SKERPLPLGHEFSGTITDVGKK 324
           V+VK+   GICG+D+H +  G   +   + P+ LGHE SG ++++G +
Sbjct: 31  VLVKINTVGICGSDVHFLTHGAIGSFVVKEPMVLGHESSGVVSEIGSE 78


>Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.5 protein.
          Length = 347

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 27/100 (27%), Positives = 46/100 (46%)
 Frame = +2

Query: 341 GQKVVVDPNRACSLCDFCRKGKYQYCLTAGINXTVGIWRDGGWAQYVKVPQDQVYLLPDG 520
           G ++ ++P   C LC+ C+ G+Y  C       T  +   G  +++V    D  + LPD 
Sbjct: 85  GDRIAMEPGLPCKLCEHCKTGRYNLCPEMRFFATPPV--HGTLSRFVVHDADFCFKLPDN 142

Query: 521 VSTXPGGLCXPYSCVAHGYXRASPLLVXXKILIXXXGXIG 640
           +S   G L  P S   H   R + + +  ++L+   G IG
Sbjct: 143 LSFEDGALIEPLSVAIHACRRGN-VQMGHRVLVLGAGPIG 181



 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
 Frame = +1

Query: 157 PLPKXENDXDVIVKVEYSGICGTDLHI-VQGEF-PASKERPLPLGHEFSGTITDVGKK 324
           P+PK      V+VKV   GICG+D+H    G   P   + P+ +GHE SG +++VG +
Sbjct: 22  PIPKP-GPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIVGHETSGIVSEVGNE 78


>U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol
           dehydrogenase protein.
          Length = 384

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +1

Query: 184 DVIVKVEYSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGK 321
           +V VK+ Y+ +C TD + + G  P     P+ LGHE SG +  VG+
Sbjct: 37  EVRVKILYTAVCHTDAYTLDGHDPEGL-FPVVLGHEGSGIVESVGE 81


>AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical
           protein H24K24.3a protein.
          Length = 384

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +1

Query: 184 DVIVKVEYSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGK 321
           +V VK+ Y+ +C TD + + G  P     P+ LGHE SG +  VG+
Sbjct: 37  EVRVKILYTAVCHTDAYTLDGHDPEGL-FPVVLGHEGSGIVESVGE 81


>AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical
           protein Y50D4C.2 protein.
          Length = 554

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +1

Query: 205 YSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGK 321
           Y+ +C TD + + G  P     P+ LGHE SG +  VGK
Sbjct: 217 YTSVCHTDAYTLDGHDPEGLF-PVVLGHEGSGIVESVGK 254


>AY314779-1|AAQ84886.1|  454|Caenorhabditis elegans secretin
           receptor-like proteinSEB-3 protein.
          Length = 454

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +2

Query: 329 SSXKGQKVVVD-PNRACSLCDFCRKGKYQYCLTAGINXTVGIWRDGGWAQYVKVPQDQVY 505
           S+  GQ++  D P   C+    C + K +Y ++   N ++G+W+D  +   +KV ++   
Sbjct: 40  SAHIGQQMTRDCPFTFCTAIPGCEEIKDRYMVSRNCN-SMGVWQDSNYTMCIKVVEEYAQ 98

Query: 506 LL 511
            L
Sbjct: 99  CL 100


>AL031620-2|CAA20927.2|  454|Caenorhabditis elegans Hypothetical
           protein C18B12.2 protein.
          Length = 454

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +2

Query: 329 SSXKGQKVVVD-PNRACSLCDFCRKGKYQYCLTAGINXTVGIWRDGGWAQYVKVPQDQVY 505
           S+  GQ++  D P   C+    C + K +Y ++   N ++G+W+D  +   +KV ++   
Sbjct: 40  SAHIGQQMTRDCPFTFCTAIPGCEEIKDRYMVSRNCN-SMGVWQDSNYTMCIKVVEEYAQ 98

Query: 506 LL 511
            L
Sbjct: 99  CL 100


>Z81122-6|CAB03358.1|  663|Caenorhabditis elegans Hypothetical
           protein T13F2.7 protein.
          Length = 663

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -3

Query: 472 GPASVPPDPDGTVNTGGQAVLVFSFT-TEITEAAGSVRIHDD 350
           G   +  D DG V  GG+A+   S+     T+A+G VR +DD
Sbjct: 405 GDVDMDSDDDGNVTIGGEALSFDSWARITKTKASGVVRANDD 446


>L23648-15|AAM48526.1|  511|Caenorhabditis elegans Dipeptidyl
           peptidase four (iv)family protein 6, isoform b protein.
          Length = 511

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -2

Query: 572 RAPRKSMXRIGHLXPWTRRQVGGRPDPAEPSRTGPS 465
           R P+ SM + GH+  + ++ +GG   P +P +   S
Sbjct: 410 RKPQNSMEQHGHIETFLQQCLGGETQPFQPGQYNSS 445


>L23648-13|AAM48525.1|  740|Caenorhabditis elegans Dipeptidyl
           peptidase four (iv)family protein 6, isoform a protein.
          Length = 740

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -2

Query: 572 RAPRKSMXRIGHLXPWTRRQVGGRPDPAEPSRTGPS 465
           R P+ SM + GH+  + ++ +GG   P +P +   S
Sbjct: 639 RKPQNSMEQHGHIETFLQQCLGGETQPFQPGQYNSS 674


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,068,648
Number of Sequences: 27780
Number of extensions: 281285
Number of successful extensions: 688
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)