Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_H11
(955 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.10
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.24
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.24
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.73
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 1.3
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 2.9
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 5.1
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 26 6.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 750 PDPPXXLLPSVXPXPXPPXPXAFPXPXXXRSXPPPXXCXXPPXPP 884
P PP ++P+ P P P P A PPP P PP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 29.1 bits (62), Expect = 0.97
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +1
Query: 841 PPPPPXXAXLPXXPPXXXPXPXTXXXXXXXXXPXPXP 951
PPPPP +P P P P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/51 (27%), Positives = 18/51 (35%)
Frame = +3
Query: 657 PTPXXTFQMXXPXPLXRSXPAXSPXXXPXXIPDPPXXLLPSVXPXPXPPXP 809
P P + P P P +P P PP + + P P PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = +3
Query: 726 PXXXPXXIPDPPXXLLPSVXPXPXPPXPXAFPXPXXXRSXPPPXXCXXPPXPP 884
P P IP PP + P P PP A P PPP PP PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP------PPP-----PPPPP 783
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +3
Query: 657 PTPXXTFQMXXPXPLXRSXPAXSPXXXPXXIPDPPXXLLPSVXPXPXPPXPXA 815
P P P P+ PA P P PP + P P PP P A
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPP---PPPPPPGVAGAGPPPPPPPPPA 784
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.1 bits (67), Expect = 0.24
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +3
Query: 714 PAXSPXXXPXXIPDPPXXLLPSVXPXPX--PPXPXAFPXPXXXRSXPPP 854
P +P P PP P+ P P PP P A P P S PPP
Sbjct: 1686 PVSTPPVRPQSAA-PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 826 PXXVVPPPPPXXAXLPXXPPXXXPXP 903
P + PPPP +P PP P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/52 (28%), Positives = 17/52 (32%)
Frame = +3
Query: 696 PLXRSXPAXSPXXXPXXIPDPPXXLLPSVXPXPXPPXPXAFPXPXXXRSXPP 851
P R A P P PP + P P P P + P P S P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.24
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 8/73 (10%)
Frame = +3
Query: 690 PXPLXRSXPAXSPXXXPXXIPDPPXXLLP--------SVXPXPXPPXPXAFPXPXXXRSX 845
P PL S +P P IP LP S P P PP P S
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSA 435
Query: 846 PPPXXCXXPPXPP 884
PP P PP
Sbjct: 436 PPSLPMGAPAAPP 448
Score = 30.7 bits (66), Expect = 0.32
Identities = 26/98 (26%), Positives = 31/98 (31%), Gaps = 6/98 (6%)
Frame = +3
Query: 606 PXPPCQASRXSXLKXQVPTPXXTFQMXXPXPLX--RSXPAXSPXXXPXXIPDPPXXLLPS 779
P PP A + + P P RS PA P PP PS
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPS 422
Query: 780 VXPXPXPPXPXAFP--XPXXXRSXP--PPXXCXXPPXP 881
+ P P P + P P + P PP PP P
Sbjct: 423 LPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 29.9 bits (64), Expect = 0.55
Identities = 31/91 (34%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Frame = +3
Query: 612 PPC-QASRXSXLKXQVPTPXXTFQMXXPXPLXRSXPAXSPXXXPXXIPDPPXXLLPSVXP 788
PP ASR S VPTP + P L S P P P P PP P P
Sbjct: 404 PPLGNASRTST--PPVPTPP-SLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSA--PIAPP 458
Query: 789 XPXPPXPXAFPXPXXXRSXPPPXXCXXPPXP 881
P P A P P + PPP P P
Sbjct: 459 LPAG-MPAAPPLPPAAPA-PPPAPAPAPAAP 487
Score = 27.1 bits (57), Expect = 3.9
Identities = 20/68 (29%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Frame = +3
Query: 606 PXPPCQASRXSXLKXQVPTPXXTFQMXXPXPLXRSXPAXS---PXXXPXXIPDPPXXLLP 776
P PP SR + K + + P P RS A S P P PP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 777 SVXPXPXP 800
S P P
Sbjct: 371 STGRQPPP 378
Score = 27.1 bits (57), Expect = 3.9
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 1/66 (1%)
Frame = +1
Query: 709 PXLPXPXXPXLXXYXIPLXPFSXPXXXXPXLHXXXXFRXPXXV-VPPPPPXXAXLPXXPP 885
P LP P L P P P P L P +P PP P PP
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAA--PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Query: 886 XXXPXP 903
P P
Sbjct: 479 APAPAP 484
Score = 26.2 bits (55), Expect = 6.8
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Frame = +3
Query: 777 SVXPXPXPPXPXA---FPXPXXXRSXPPP 854
S+ P P PP A P P RS PPP
Sbjct: 335 SLPPPPPPPRSNAAGSIPLPPQGRSAPPP 363
Score = 26.2 bits (55), Expect = 6.8
Identities = 31/127 (24%), Positives = 35/127 (27%), Gaps = 9/127 (7%)
Frame = +1
Query: 598 APXPXPPVKHLEXXXSSXKXRHPXXXSRXXPLXPXXXPXLPXPXXPXLXXYX-------- 753
AP P PP S+ + P SR P P +P P L
Sbjct: 360 APPPPPP----RSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTP 415
Query: 754 -IPLXPFSXPXXXXPXLHXXXXFRXPXXVVPPPPPXXAXLPXXPPXXXPXPXTXXXXXXX 930
+P P S P P L P P PP P PP P
Sbjct: 416 PVPTPP-SLPPSAPPSLPPSAPPSLPMGA-PAAPPLPPSAPIAPPLPAGMPAAPPLPPAA 473
Query: 931 XXPXPXP 951
P P P
Sbjct: 474 PAPPPAP 480
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.73
Identities = 20/80 (25%), Positives = 26/80 (32%), Gaps = 5/80 (6%)
Frame = +3
Query: 657 PTPXXTFQMXXPXPLXRSXPAXSPXXXPXXIPDPPXXLLPSVXPXPXPPXPXAF----PX 824
P P + P P + P +P +P P + P P PP P P
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPV 1210
Query: 825 PXXXRSXP-PPXXCXXPPXP 881
P + P P PP P
Sbjct: 1211 PPPSTAPPVPTPSAGLPPVP 1230
Score = 29.5 bits (63), Expect = 0.73
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 5/69 (7%)
Frame = +3
Query: 690 PXPLXRSXPAXSPXXXPXXIPDP---PXXLLPSVXPXPXPPXPXAFPXPXXXRSXPPPXX 860
P P P P +P P P PSV P PP A P P PP
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPV 1231
Query: 861 --CXXPPXP 881
PP P
Sbjct: 1232 PTAKAPPVP 1240
Score = 29.1 bits (62), Expect = 0.97
Identities = 28/113 (24%), Positives = 32/113 (28%), Gaps = 2/113 (1%)
Frame = +3
Query: 606 PXPPCQASRXSXLKXQVPTPXXTFQMXXPXPLXRSXPAXSPXXXPXXIPDPPXXLLPSVX 785
P P + K V P P P+ + A P P P P PSV
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAP-PVPKPSVAAPPVPVPSGAPPVPK---PSVA 1148
Query: 786 PXPXPPXPXAFPXPXXXRSXPP--PXXCXXPPXPPXXXXXXXYPXXXXXPXXP 938
P P A P P + PP PP P P P P
Sbjct: 1149 APPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 27.9 bits (59), Expect = 2.2
Identities = 26/109 (23%), Positives = 29/109 (26%), Gaps = 1/109 (0%)
Frame = +3
Query: 615 PCQASRXSXLKXQVPTPXXTFQMXXPXPLXRSXPAXSPXXXPXXIPDPPXXLLPSVXPXP 794
P + +R S + P P PL S SP P P L V P
Sbjct: 945 PTKLTRPSNDGRKASGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSP 1004
Query: 795 XPPXPXAFPXPXXXRSXPP-PXXCXXPPXPPXXXXXXXYPXXXXXPXXP 938
P P P PP P P P P P P
Sbjct: 1005 AAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVP 1053
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.7 bits (61), Expect = 1.3
Identities = 21/88 (23%), Positives = 26/88 (29%)
Frame = +3
Query: 591 AXCXXPXPPCQASRXSXLKXQVPTPXXTFQMXXPXPLXRSXPAXSPXXXPXXIPDPPXXL 770
A P P + S L+ P + P P P +P P
Sbjct: 120 ASAAPPSAPAPPTPQSELRPPTSAPPRP-SIPPPSPASAPPIPSKAPPIPSSLPPPAQPA 178
Query: 771 LPSVXPXPXPPXPXAFPXPXXXRSXPPP 854
P P P P A P P + PPP
Sbjct: 179 APVKSPPSAPSLPSAVP-PMPPKVPPPP 205
Score = 26.6 bits (56), Expect = 5.1
Identities = 18/64 (28%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Frame = +3
Query: 699 LXRSXPAXSPXXXPXXIPDPPXXLLP--SVXPXPXPPXPXAFPXPXXXRSXPPPXXCXXP 872
+ +S + +P P P P L P S P P P P P PP P
Sbjct: 115 IGKSSASAAPPSAPAP-PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
Query: 873 PXPP 884
P P
Sbjct: 174 PAQP 177
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.5 bits (58), Expect = 2.9
Identities = 29/113 (25%), Positives = 31/113 (27%), Gaps = 2/113 (1%)
Frame = +3
Query: 606 PXPPCQASRXSXLKXQVPTPXXTFQMXXPXPLXRSXPAXSPXXXPXXIPDPPXXLLPSVX 785
P P A S +P Q P +P P PP P
Sbjct: 444 PAAPQSAPALSMNPSSLPPWQQPTQQSAVQPSNLVPSQNAPFIPGTSAPLPPTTFAP--P 501
Query: 786 PXPXPPXPXAFPXPXXXRSXPP--PXXCXXPPXPPXXXXXXXYPXXXXXPXXP 938
P PP P A P S PP P PP P YP P P
Sbjct: 502 GVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMP--APFPGYPAVPAMPGIP 552
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.6 bits (56), Expect = 5.1
Identities = 19/81 (23%), Positives = 21/81 (25%)
Frame = +3
Query: 696 PLXRSXPAXSPXXXPXXIPDPPXXLLPSVXPXPXPPXPXAFPXPXXXRSXPPPXXCXXPP 875
P PA +P PP + P P P P P S P P P
Sbjct: 557 PSVPQRPAVPVVPEALSVPQPP--VAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAP 614
Query: 876 XPPXXXXXXXYPXXXXXPXXP 938
P P P P
Sbjct: 615 EVPSVPQRPAVPVVPEAPSVP 635
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 826 PXXVVPPPPPXXAXLPXXPPXXXPXPXT 909
P + P P P A LP PP P T
Sbjct: 237 PIAIAPVPAPNQAALPPIPPQALPANGT 264
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,272,438
Number of Sequences: 5004
Number of extensions: 13330
Number of successful extensions: 125
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 487313384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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