Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_H08
         (879 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...   100   1e-22

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 99.5 bits (237), Expect = 1e-22
 Identities = 43/57 (75%), Positives = 49/57 (85%)
 Frame = +3

Query: 249 LFEKRPKNFAIGQGXQPTRDLSRFVRWPKYIRIQRQKAVLXRRLKVPPPINXFTQTL 419
           LFEKR KN+ IGQ  QP RDLSRFV+WPKYIRIQR +A+L +RLK+PPPIN FTQTL
Sbjct: 37  LFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHRAILQKRLKIPPPINQFTQTL 93



 Score = 52.4 bits (120), Expect = 2e-08
 Identities = 21/31 (67%), Positives = 25/31 (80%)
 Frame = +2

Query: 620 LWVIAHDVDPXXLVLFLPXLCRXMGVPYCXV 712
           L +IAHDVDP  LV++LP LCR MGVPYC +
Sbjct: 160 LVIIAHDVDPIELVVYLPALCRKMGVPYCII 190



 Score = 39.9 bits (89), Expect = 1e-04
 Identities = 22/68 (32%), Positives = 30/68 (44%)
 Frame = +1

Query: 421 DXTTAKGLFKILEKYXPETXXXXXXXXXXXXXXKVAXXDEPPPXRXXTIRSGTNTVXXLV 600
           D  TA+ + K  +KY PE               K A  +EPP  R   +R G N+V  +V
Sbjct: 94  DKPTAQQVMKCWKKYRPENPIARVQRLKAKAEAKAAGKEEPPSKRANQLRQGINSVVKMV 153

Query: 601 XKXXAXLV 624
            +  A LV
Sbjct: 154 EQKKAQLV 161


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,726
Number of Sequences: 2352
Number of extensions: 7120
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)