Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_H08
(879 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 105 8e-23
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 105 8e-23
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 105 8e-23
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 105 8e-23
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 105 8e-23
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 31 1.6
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 31 1.6
AJ243904-1|CAB64937.1| 773|Drosophila melanogaster SF1 protein ... 29 6.4
AE014297-2366|AAF55430.3| 787|Drosophila melanogaster CG5836-PA... 29 6.4
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 105 bits (252), Expect = 8e-23
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +3
Query: 249 LFEKRPKNFAIGQGXQPTRDLSRFVRWPKYIRIQRQKAVLXRRLKVPPPINXFTQTL 419
LFEKRPKNF IGQ QP RDLSRFVRWPKYIR+QRQKAVL +RLKVPPPI+ F+QTL
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTL 92
Score = 55.6 bits (128), Expect = 9e-08
Identities = 25/31 (80%), Positives = 25/31 (80%)
Frame = +2
Query: 620 LWVIAHDVDPXXLVLFLPXLCRXMGVPYCXV 712
L VIAHDVDP LVLFLP LCR MGVPYC V
Sbjct: 159 LVVIAHDVDPLELVLFLPALCRKMGVPYCIV 189
Score = 45.2 bits (102), Expect = 1e-04
Identities = 25/68 (36%), Positives = 32/68 (47%)
Frame = +1
Query: 421 DXTTAKGLFKILEKYXPETXXXXXXXXXXXXXXKVAXXDEPPPXRXXTIRSGTNTVXXLV 600
D TTA LFK+LEKY PE+ K D P + + +GTNTV L+
Sbjct: 93 DKTTAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLI 152
Query: 601 XKXXAXLV 624
+ A LV
Sbjct: 153 EQKKAQLV 160
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 105 bits (252), Expect = 8e-23
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +3
Query: 249 LFEKRPKNFAIGQGXQPTRDLSRFVRWPKYIRIQRQKAVLXRRLKVPPPINXFTQTL 419
LFEKRPKNF IGQ QP RDLSRFVRWPKYIR+QRQKAVL +RLKVPPPI+ F+QTL
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTL 92
Score = 55.6 bits (128), Expect = 9e-08
Identities = 25/31 (80%), Positives = 25/31 (80%)
Frame = +2
Query: 620 LWVIAHDVDPXXLVLFLPXLCRXMGVPYCXV 712
L VIAHDVDP LVLFLP LCR MGVPYC V
Sbjct: 159 LVVIAHDVDPLELVLFLPALCRKMGVPYCIV 189
Score = 45.2 bits (102), Expect = 1e-04
Identities = 25/68 (36%), Positives = 32/68 (47%)
Frame = +1
Query: 421 DXTTAKGLFKILEKYXPETXXXXXXXXXXXXXXKVAXXDEPPPXRXXTIRSGTNTVXXLV 600
D TTA LFK+LEKY PE+ K D P + + +GTNTV L+
Sbjct: 93 DKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLI 152
Query: 601 XKXXAXLV 624
+ A LV
Sbjct: 153 EQKKAQLV 160
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 105 bits (252), Expect = 8e-23
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +3
Query: 249 LFEKRPKNFAIGQGXQPTRDLSRFVRWPKYIRIQRQKAVLXRRLKVPPPINXFTQTL 419
LFEKRPKNF IGQ QP RDLSRFVRWPKYIR+QRQKAVL +RLKVPPPI+ F+QTL
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTL 92
Score = 55.6 bits (128), Expect = 9e-08
Identities = 25/31 (80%), Positives = 25/31 (80%)
Frame = +2
Query: 620 LWVIAHDVDPXXLVLFLPXLCRXMGVPYCXV 712
L VIAHDVDP LVLFLP LCR MGVPYC V
Sbjct: 159 LVVIAHDVDPLELVLFLPALCRKMGVPYCIV 189
Score = 45.2 bits (102), Expect = 1e-04
Identities = 25/68 (36%), Positives = 32/68 (47%)
Frame = +1
Query: 421 DXTTAKGLFKILEKYXPETXXXXXXXXXXXXXXKVAXXDEPPPXRXXTIRSGTNTVXXLV 600
D TTA LFK+LEKY PE+ K D P + + +GTNTV L+
Sbjct: 93 DKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLI 152
Query: 601 XKXXAXLV 624
+ A LV
Sbjct: 153 EQKKAQLV 160
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 105 bits (252), Expect = 8e-23
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +3
Query: 249 LFEKRPKNFAIGQGXQPTRDLSRFVRWPKYIRIQRQKAVLXRRLKVPPPINXFTQTL 419
LFEKRPKNF IGQ QP RDLSRFVRWPKYIR+QRQKAVL +RLKVPPPI+ F+QTL
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTL 92
Score = 55.6 bits (128), Expect = 9e-08
Identities = 25/31 (80%), Positives = 25/31 (80%)
Frame = +2
Query: 620 LWVIAHDVDPXXLVLFLPXLCRXMGVPYCXV 712
L VIAHDVDP LVLFLP LCR MGVPYC V
Sbjct: 159 LVVIAHDVDPLELVLFLPALCRKMGVPYCIV 189
Score = 45.2 bits (102), Expect = 1e-04
Identities = 25/68 (36%), Positives = 32/68 (47%)
Frame = +1
Query: 421 DXTTAKGLFKILEKYXPETXXXXXXXXXXXXXXKVAXXDEPPPXRXXTIRSGTNTVXXLV 600
D TTA LFK+LEKY PE+ K D P + + +GTNTV L+
Sbjct: 93 DKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLI 152
Query: 601 XKXXAXLV 624
+ A LV
Sbjct: 153 EQKKAQLV 160
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 105 bits (252), Expect = 8e-23
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +3
Query: 249 LFEKRPKNFAIGQGXQPTRDLSRFVRWPKYIRIQRQKAVLXRRLKVPPPINXFTQTL 419
LFEKRPKNF IGQ QP RDLSRFVRWPKYIR+QRQKAVL +RLKVPPPI+ F+QTL
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTL 92
Score = 55.6 bits (128), Expect = 9e-08
Identities = 25/31 (80%), Positives = 25/31 (80%)
Frame = +2
Query: 620 LWVIAHDVDPXXLVLFLPXLCRXMGVPYCXV 712
L VIAHDVDP LVLFLP LCR MGVPYC V
Sbjct: 159 LVVIAHDVDPLELVLFLPALCRKMGVPYCIV 189
Score = 45.2 bits (102), Expect = 1e-04
Identities = 25/68 (36%), Positives = 32/68 (47%)
Frame = +1
Query: 421 DXTTAKGLFKILEKYXPETXXXXXXXXXXXXXXKVAXXDEPPPXRXXTIRSGTNTVXXLV 600
D TTA LFK+LEKY PE+ K D P + + +GTNTV L+
Sbjct: 93 DKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLI 152
Query: 601 XKXXAXLV 624
+ A LV
Sbjct: 153 EQKKAQLV 160
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 626 VIAHDVDPXXLVLFLPXLCRXMGVPYCXV 712
V+A D +P ++L LP LC VPY V
Sbjct: 54 VLAGDAEPIEILLHLPLLCEDKNVPYVFV 82
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 626 VIAHDVDPXXLVLFLPXLCRXMGVPYCXV 712
V+A D +P ++L LP LC VPY V
Sbjct: 54 VLAGDAEPIEILLHLPLLCEDKNVPYVFV 82
>AJ243904-1|CAB64937.1| 773|Drosophila melanogaster SF1 protein
protein.
Length = 773
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 359 GCTSASSESAPSDQPIYPDXGTRLQLRAF 445
G T E +PS +PIY G RL R F
Sbjct: 326 GITQNPEERSPSPEPIYSSDGKRLNTREF 354
>AE014297-2366|AAF55430.3| 787|Drosophila melanogaster CG5836-PA
protein.
Length = 787
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 359 GCTSASSESAPSDQPIYPDXGTRLQLRAF 445
G T E +PS +PIY G RL R F
Sbjct: 326 GITQNPEERSPSPEPIYSSDGKRLNTREF 354
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,521,351
Number of Sequences: 53049
Number of extensions: 317972
Number of successful extensions: 593
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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