Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_H06
         (1380 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB011094-1|BAA25448.1| 1560|Homo sapiens KIAA0522 protein protein.     32   5.6  
BC110580-1|AAI10581.1|  658|Homo sapiens TCF3 protein protein.         31   9.8  

>AB011094-1|BAA25448.1| 1560|Homo sapiens KIAA0522 protein protein.
          Length = 1560

 Score = 31.9 bits (69), Expect = 5.6
 Identities = 19/51 (37%), Positives = 22/51 (43%)
 Frame = +2

Query: 1010 HXXXPPHPAXPL*PIXXTPXASPHSSXEPXXXPSXSPHXXXXXSXXPVXXT 1162
            H   PPHP+ P  P+   P  SPH+   P   P  SPH     S  P   T
Sbjct: 1495 HSPIPPHPSYP--PL---PPPSPHTPHSP--LPPTSPHGPLHASGPPAQPT 1538


>BC110580-1|AAI10581.1|  658|Homo sapiens TCF3 protein protein.
          Length = 658

 Score = 31.1 bits (67), Expect = 9.8
 Identities = 20/61 (32%), Positives = 23/61 (37%)
 Frame = +1

Query: 982  RSXXPSQPSX*XTPPSPXXTTXTHRPHPRSLXTLXXRAXXXPFSXPSXXPXXLXXSRSTH 1161
            R+    QP+   +PPSP      HRPH     T    A    F  P   P  L  SR   
Sbjct: 474  RARTRCQPTPRHSPPSPHQDAHVHRPHAHRTHTGRPSAGPTLFPQPHCLP--LAPSRRPP 531

Query: 1162 H 1164
            H
Sbjct: 532  H 532


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,425,575
Number of Sequences: 237096
Number of extensions: 711788
Number of successful extensions: 896
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 20060143044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)