Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_H05
(1288 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY388963-1|AAR26468.1| 837|Homo sapiens protocadherin 15 isofor... 32 3.9
AY029237-1|AAK31804.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.9
AY029205-1|AAK31581.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.9
AL365496-11|CAH73917.1| 837|Homo sapiens protocadherin 15 protein. 32 3.9
AL365496-10|CAM19874.1| 1957|Homo sapiens protocadherin 15 protein. 32 3.9
AL365496-9|CAM19873.1| 1952|Homo sapiens protocadherin 15 protein. 32 3.9
AL365496-8|CAM19872.1| 1932|Homo sapiens protocadherin 15 protein. 32 3.9
AL365496-7|CAH73916.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.9
AL360214-13|CAM21542.1| 1957|Homo sapiens protocadherin 15 protein. 32 3.9
AL360214-12|CAM21543.1| 1952|Homo sapiens protocadherin 15 protein. 32 3.9
AL360214-11|CAM21544.1| 1932|Homo sapiens protocadherin 15 protein. 32 3.9
AL360214-10|CAI15201.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.9
AL356114-13|CAM15124.1| 1957|Homo sapiens protocadherin 15 protein. 32 3.9
AL356114-12|CAM15123.1| 1952|Homo sapiens protocadherin 15 protein. 32 3.9
AL356114-11|CAM15125.1| 1932|Homo sapiens protocadherin 15 protein. 32 3.9
AL356114-10|CAH71769.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.9
AL353784-11|CAM16792.1| 1957|Homo sapiens protocadherin 15 protein. 32 3.9
AL353784-10|CAM16791.1| 1952|Homo sapiens protocadherin 15 protein. 32 3.9
AL353784-9|CAH72390.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.9
BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein. 32 5.2
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 32 5.2
AB011174-1|BAA25528.1| 962|Homo sapiens KIAA0602 protein protein. 32 5.2
>AY388963-1|AAR26468.1| 837|Homo sapiens protocadherin 15 isoform B
protein.
Length = 837
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPP 1075
P P T P S S S P P P P P P PPP
Sbjct: 669 PLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 713
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 1019 PXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP 1114
P +CP P P + P PPP P P P
Sbjct: 624 PSACPLPPPPPISPPSPPPAPAPLAPPPDISP 655
>AY029237-1|AAK31804.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPP 1075
P P T P S S S P P P P P P PPP
Sbjct: 1787 PLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1831
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 1019 PXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP 1114
P +CP P P + P PPP P P P
Sbjct: 1742 PSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1773
>AY029205-1|AAK31581.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPP 1075
P P T P S S S P P P P P P PPP
Sbjct: 1787 PLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1831
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 1019 PXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP 1114
P +CP P P + P PPP P P P
Sbjct: 1742 PSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1773
>AL365496-11|CAH73917.1| 837|Homo sapiens protocadherin 15 protein.
Length = 837
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPP 1075
P P T P S S S P P P P P P PPP
Sbjct: 669 PLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 713
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 1019 PXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP 1114
P +CP P P + P PPP P P P
Sbjct: 624 PSACPLPPPPPISPPSPPPAPAPLAPPPDISP 655
>AL365496-10|CAM19874.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPP 1075
P P T P S S S P P P P P P PPP
Sbjct: 1789 PLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1833
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 1019 PXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP 1114
P +CP P P + P PPP P P P
Sbjct: 1744 PSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1775
>AL365496-9|CAM19873.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPP 1075
P P T P S S S P P P P P P PPP
Sbjct: 1784 PLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1828
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 1019 PXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP 1114
P +CP P P + P PPP P P P
Sbjct: 1739 PSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1770
>AL365496-8|CAM19872.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPP 1075
P P T P S S S P P P P P P PPP
Sbjct: 1764 PLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1808
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 1019 PXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP 1114
P +CP P P + P PPP P P P
Sbjct: 1719 PSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1750
>AL365496-7|CAH73916.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPP 1075
P P T P S S S P P P P P P PPP
Sbjct: 1787 PLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1831
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 1019 PXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP 1114
P +CP P P + P PPP P P P
Sbjct: 1742 PSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1773
>AL360214-13|CAM21542.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPP 1075
P P T P S S S P P P P P P PPP
Sbjct: 1789 PLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1833
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 1019 PXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP 1114
P +CP P P + P PPP P P P
Sbjct: 1744 PSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1775
>AL360214-12|CAM21543.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPP 1075
P P T P S S S P P P P P P PPP
Sbjct: 1784 PLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1828
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 1019 PXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP 1114
P +CP P P + P PPP P P P
Sbjct: 1739 PSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1770
>AL360214-11|CAM21544.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPP 1075
P P T P S S S P P P P P P PPP
Sbjct: 1764 PLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1808
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 1019 PXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP 1114
P +CP P P + P PPP P P P
Sbjct: 1719 PSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1750
>AL360214-10|CAI15201.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPP 1075
P P T P S S S P P P P P P PPP
Sbjct: 1787 PLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1831
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 1019 PXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP 1114
P +CP P P + P PPP P P P
Sbjct: 1742 PSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1773
>AL356114-13|CAM15124.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPP 1075
P P T P S S S P P P P P P PPP
Sbjct: 1789 PLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1833
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 1019 PXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP 1114
P +CP P P + P PPP P P P
Sbjct: 1744 PSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1775
>AL356114-12|CAM15123.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPP 1075
P P T P S S S P P P P P P PPP
Sbjct: 1784 PLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1828
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 1019 PXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP 1114
P +CP P P + P PPP P P P
Sbjct: 1739 PSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1770
>AL356114-11|CAM15125.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPP 1075
P P T P S S S P P P P P P PPP
Sbjct: 1764 PLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1808
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 1019 PXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP 1114
P +CP P P + P PPP P P P
Sbjct: 1719 PSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1750
>AL356114-10|CAH71769.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPP 1075
P P T P S S S P P P P P P PPP
Sbjct: 1787 PLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1831
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 1019 PXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP 1114
P +CP P P + P PPP P P P
Sbjct: 1742 PSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1773
>AL353784-11|CAM16792.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPP 1075
P P T P S S S P P P P P P PPP
Sbjct: 1789 PLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1833
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 1019 PXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP 1114
P +CP P P + P PPP P P P
Sbjct: 1744 PSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1775
>AL353784-10|CAM16791.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPP 1075
P P T P S S S P P P P P P PPP
Sbjct: 1784 PLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1828
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 1019 PXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP 1114
P +CP P P + P PPP P P P
Sbjct: 1739 PSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1770
>AL353784-9|CAH72390.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPP 1075
P P T P S S S P P P P P P PPP
Sbjct: 1787 PLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPP 1831
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 1019 PXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP 1114
P +CP P P + P PPP P P P
Sbjct: 1742 PSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1773
>BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein.
Length = 600
Score = 31.9 bits (69), Expect = 5.2
Identities = 21/81 (25%), Positives = 24/81 (29%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPPXX 1120
P P T P P A P P P P PP P P PP
Sbjct: 95 PTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPP 154
Query: 1121 RXRALWAXPRQXRAXAGSXPQ 1183
L A P + A + P+
Sbjct: 155 AAAPLAAPPEEPAAPSPEDPE 175
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 31.9 bits (69), Expect = 5.2
Identities = 21/81 (25%), Positives = 24/81 (29%)
Frame = +2
Query: 941 PXXXPXHTXLPTSXSXSXPXXXAXXXPXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPPXX 1120
P P T P P A P P P P PP P P PP
Sbjct: 640 PTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPP 699
Query: 1121 RXRALWAXPRQXRAXAGSXPQ 1183
L A P + A + P+
Sbjct: 700 AAAPLAAPPEEPAAPSPEDPE 720
>AB011174-1|BAA25528.1| 962|Homo sapiens KIAA0602 protein protein.
Length = 962
Score = 31.9 bits (69), Expect = 5.2
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Frame = +2
Query: 1007 AXXXPXSCPXPXPXXLXPXRPPPXLHXXXPXPXXPP--XXRXRALWAXP-RQXRAXAGSX 1177
A P +CP P P P PPP H P P P R R A P R+ AG+
Sbjct: 3 ARRRPRACPTPGPG---PSPPPPGSHVTAPPPSARPARPPRVRGPAAAPGRRGSGGAGAM 59
Query: 1178 PQR 1186
+R
Sbjct: 60 AER 62
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,268,382
Number of Sequences: 237096
Number of extensions: 1141526
Number of successful extensions: 3683
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3407
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18495533280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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