Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_G22
         (917 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0544 + 29876337-29876524,29876850-29876882,29878390-298785...    29   5.2  
03_05_0825 - 27986393-27986767,27987541-27987625,27987936-279880...    28   9.0  
01_05_0679 + 24230740-24230929,24231330-24231461,24231710-242319...    28   9.0  

>02_05_0544 +
           29876337-29876524,29876850-29876882,29878390-29878577,
           29879755-29879811,29879909-29880061,29880812-29881278,
           29881477-29881635,29881718-29881834,29881966-29882117,
           29883436-29883530,29883619-29884525,29884604-29884688,
           29884775-29884843,29885045-29885224,29885367-29885495
          Length = 992

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = -1

Query: 158 HIGEADSQQDNQQLVHFGYLRTSSRIGYKNQPTQQFKS*GDSHXSRNGSG 9
           H+G A S    +   HFG+L  S    Y NQ   +F + G+    RNG+G
Sbjct: 689 HVGSAPSGAPFES--HFGFLPESPETSYMNQ--VRFGNIGNIGSGRNGTG 734


>03_05_0825 -
           27986393-27986767,27987541-27987625,27987936-27988036,
           27988144-27988227,27988868-27988939,27989203-27989319,
           27989386-27989526,27989951-27990122,27990324-27990372,
           27990773-27990821,27991240-27991270,27991301-27991371
          Length = 448

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +3

Query: 183 PKEDNSLNTLAESAKKTIEELREKVE 260
           PKE ++  T+A + +KT EE+R +++
Sbjct: 91  PKESSTATTMAAATEKTAEEIRRELQ 116


>01_05_0679 +
           24230740-24230929,24231330-24231461,24231710-24231977,
           24232170-24232388,24233538-24233673,24233899-24234147,
           24234783-24235100
          Length = 503

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +3

Query: 216 ESAKKTIEELR--EKVESALAPETVKKNFGTMVDSFNEFYKNLKPAE 350
           E A+K  E L+  +K   +L PE +K+ F +++ +F +F   L+P E
Sbjct: 259 EEARKFNEALQRWDKNAVSLVPEGLKRFFLSIMSNFRDFEDELEPHE 305


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,181,477
Number of Sequences: 37544
Number of extensions: 345404
Number of successful extensions: 968
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)