Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_G19
         (1083 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   1.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   5.2  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    21   5.3  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   6.8  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 1.3
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = -1

Query: 660 ADGXGXGGADGXXXXQWGXGGXRGXGXAGGG 568
           A G   GG+DG      G GG  G G  GGG
Sbjct: 534 AGGMAGGGSDGPEYEGAGRGGV-GSGIGGGG 563



 Score = 24.6 bits (51), Expect = 5.2
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -1

Query: 654 GXGXGGADGXXXXQWGXGGXRGXGXAGGG 568
           G G GGA G      G  G  G G +GGG
Sbjct: 838 GAGGGGAGGPLR---GSSGGAGGGSSGGG 863


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 1.7
 Identities = 20/68 (29%), Positives = 21/68 (30%)
 Frame = -3

Query: 649 GXRGGXWXXXXPMGEXGXQGGWXGXRXXGXXPRGLXGXXRXRGXXGXGSGGXGXXXAXGD 470
           G  GG      P G  G  GG       G   R      R R   G G+GG G      D
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGGMQLD 260

Query: 469 XAGRGCXS 446
             G    S
Sbjct: 261 GRGNAIPS 268



 Score = 24.6 bits (51), Expect = 5.2
 Identities = 19/71 (26%), Positives = 21/71 (29%)
 Frame = -1

Query: 783 RTXXGGGGXLGGAXXXXAXAXXXXXXXXXXXXXXXXXXXXXADGXGXGGADGXXXXQWGX 604
           R+  GGGG  GG     A +                       G   GGA G      G 
Sbjct: 164 RSSSGGGG--GGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGG 221

Query: 603 GGXRGXGXAGG 571
            G  G G  GG
Sbjct: 222 PGPGGGGGGGG 232


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 5.2
 Identities = 13/51 (25%), Positives = 15/51 (29%)
 Frame = +3

Query: 492 PXPPXPXPXXPRXRXXPXXPRGXXPXXLXPSXPPCXPXSPIGXXXXHXPPL 644
           P PP P    P+    P   R   P    P   P     P        PP+
Sbjct: 209 PQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPM 259


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 21.4 bits (43), Expect(2) = 5.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 725 AXAXXXXAPPNXPPPP 772
           A A    +PP  PPPP
Sbjct: 775 AFADGIGSPPPPPPPP 790



 Score = 21.0 bits (42), Expect(2) = 5.3
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 749 PPNXPPPPXXVRLXAPXRP 805
           PP  PPPP  +      RP
Sbjct: 784 PPPPPPPPSSLSPGGVPRP 802


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 6.8
 Identities = 10/30 (33%), Positives = 11/30 (36%)
 Frame = +1

Query: 829 PRTPPPXXLPXXXPXLXXRXPXPSPXPSQP 918
           P  P     P   P L    P P+P P  P
Sbjct: 561 PLNPAQLRFPAGFPNLPNAQPPPAPPPPPP 590



 Score = 23.8 bits (49), Expect = 9.0
 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
 Frame = +3

Query: 819 PAXSPHPSPXXXPXXPPXPXP--PXPXPLS 902
           PA  P+      P  PP P P  P P PL+
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPPSPLA 599



 Score = 23.8 bits (49), Expect = 9.0
 Identities = 13/39 (33%), Positives = 13/39 (33%)
 Frame = +3

Query: 474 PXASXXPXPPXPXPXXPRXRXXPXXPRGXXPXXLXPSXP 590
           P A   P PP P P  P        P G  P    P  P
Sbjct: 577 PNAQPPPAPPPPPPMGPPPSPLAGGPLG-GPAGSRPPLP 614


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,575
Number of Sequences: 2352
Number of extensions: 4208
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 121274205
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)