Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_G18
(1068 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin pr... 31 2.0
AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p pro... 31 2.0
AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA... 31 2.0
AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA... 31 2.0
AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p pro... 30 4.7
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA... 30 4.7
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB... 30 4.7
AY069072-1|AAL39217.1| 319|Drosophila melanogaster GH09066p pro... 30 6.2
AY058770-1|AAL13999.1| 699|Drosophila melanogaster SD05126p pro... 30 6.2
AE013599-1613|AAF58440.1| 700|Drosophila melanogaster CG17019-P... 30 6.2
>X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin
protein.
Length = 147
Score = 31.5 bits (68), Expect = 2.0
Identities = 25/82 (30%), Positives = 25/82 (30%)
Frame = -1
Query: 714 GGXXGVRRGHXXEWXXXSGGXEGXXGXGGEXGXXGAXXXXXGXRAXSXDGRRXXDRXXAX 535
GG G RG GG G G GG G G G R G A
Sbjct: 23 GGGGGGFRGRGGGGGGGGGGFGGGRGRGG-GGDRGGRGGFGGGRGGGGRGGGGGGGRGAF 81
Query: 534 GG*HXXXGRXGXXRXCGDNNAG 469
GG GR G R G G
Sbjct: 82 GGRGGGGGRGGGGRGGGGRGGG 103
>AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p
protein.
Length = 420
Score = 31.5 bits (68), Expect = 2.0
Identities = 25/86 (29%), Positives = 27/86 (31%), Gaps = 2/86 (2%)
Frame = +3
Query: 723 GSXXTAXXPLPXXTXP-PPXRXPAY-PXXLXSPXPPSPPSXSXLXAXSXXFLLSXXTXSS 896
G T P P P PP P+Y P P PP P+ S A T
Sbjct: 69 GPPQTRPPPPPPPPQPTPPAPRPSYGPPQTQPPRPPPQPTPS-APAPPPPSYGPPQTPPP 127
Query: 897 TXXXSPXPXXXAXPPXXSXPSXPXSR 974
P P A PP P P R
Sbjct: 128 RPPPQPTPSAPAPPPSYGPPQTPPPR 153
>AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA
protein.
Length = 420
Score = 31.5 bits (68), Expect = 2.0
Identities = 25/86 (29%), Positives = 27/86 (31%), Gaps = 2/86 (2%)
Frame = +3
Query: 723 GSXXTAXXPLPXXTXP-PPXRXPAY-PXXLXSPXPPSPPSXSXLXAXSXXFLLSXXTXSS 896
G T P P P PP P+Y P P PP P+ S A T
Sbjct: 69 GPPQTRPPPPPPPPQPTPPAPRPSYGPPQTQPPRPPPQPTPS-APAPPPPSYGPPQTPPP 127
Query: 897 TXXXSPXPXXXAXPPXXSXPSXPXSR 974
P P A PP P P R
Sbjct: 128 RPPPQPTPSAPAPPPSYGPPQTPPPR 153
>AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA
protein.
Length = 344
Score = 31.5 bits (68), Expect = 2.0
Identities = 25/82 (30%), Positives = 25/82 (30%)
Frame = -1
Query: 714 GGXXGVRRGHXXEWXXXSGGXEGXXGXGGEXGXXGAXXXXXGXRAXSXDGRRXXDRXXAX 535
GG G RG GG G G GG G G G R G A
Sbjct: 16 GGGGGGFRGRGGGGGGGGGGFGGGRGRGG-GGDRGGRGGFGGGRGGGGRGGGGGGGRGAF 74
Query: 534 GG*HXXXGRXGXXRXCGDNNAG 469
GG GR G R G G
Sbjct: 75 GGRGGGGGRGGGGRGGGGRGGG 96
>AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p
protein.
Length = 846
Score = 30.3 bits (65), Expect = 4.7
Identities = 27/122 (22%), Positives = 34/122 (27%)
Frame = +2
Query: 416 PLPXGLSTVEXXSXPTTXPALLSPQXRXXPXRPXXXCQPPXAXXRSXXRLPSXLXARXPX 595
P P ++ + P P + SP P P PP P L P
Sbjct: 95 PPPPRPASPKVEPPPPAPPGVESPPGPQPPASPRFDPPPPHTIEPPPPPAPPTLVPPPPP 154
Query: 596 XXXXAPXXPXSPPXPXXPSSPPDXXXHSSX*PLLTPXXPPAXRLXXXRXXTPXQXXXSPP 775
AP PP P P+ P + + P PP P PP
Sbjct: 155 ----APPTIKPPPPPAPPTVEPPPPPPPAPPTVEPPPPPPPAPTKVEPPPPPAPAEVEPP 210
Query: 776 XP 781
P
Sbjct: 211 PP 212
Score = 29.5 bits (63), Expect = 8.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 747 PLPXXTXPPPXRXPAYPXXLXSPXPPSPP 833
P P PPP PA P P PP+PP
Sbjct: 87 PAPPKVNPPPPPRPASPK--VEPPPPAPP 113
>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
isoform A protein.
Length = 1109
Score = 30.3 bits (65), Expect = 4.7
Identities = 27/122 (22%), Positives = 34/122 (27%)
Frame = +2
Query: 416 PLPXGLSTVEXXSXPTTXPALLSPQXRXXPXRPXXXCQPPXAXXRSXXRLPSXLXARXPX 595
P P ++ + P P + SP P P PP P L P
Sbjct: 358 PPPPRPASPKVEPPPPAPPGVESPPGPQPPASPRFDPPPPHTIEPPPPPAPPTLVPPPPP 417
Query: 596 XXXXAPXXPXSPPXPXXPSSPPDXXXHSSX*PLLTPXXPPAXRLXXXRXXTPXQXXXSPP 775
AP PP P P+ P + + P PP P PP
Sbjct: 418 ----APPTIKPPPPPAPPTVEPPPPPPPAPPTVEPPPPPPPAPTKVEPPPPPAPAEVEPP 473
Query: 776 XP 781
P
Sbjct: 474 PP 475
Score = 29.5 bits (63), Expect = 8.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 747 PLPXXTXPPPXRXPAYPXXLXSPXPPSPP 833
P P PPP PA P P PP+PP
Sbjct: 350 PAPPKVNPPPPPRPASPK--VEPPPPAPP 376
>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
isoform B protein.
Length = 1150
Score = 30.3 bits (65), Expect = 4.7
Identities = 27/122 (22%), Positives = 34/122 (27%)
Frame = +2
Query: 416 PLPXGLSTVEXXSXPTTXPALLSPQXRXXPXRPXXXCQPPXAXXRSXXRLPSXLXARXPX 595
P P ++ + P P + SP P P PP P L P
Sbjct: 358 PPPPRPASPKVEPPPPAPPGVESPPGPQPPASPRFDPPPPHTIEPPPPPAPPTLVPPPPP 417
Query: 596 XXXXAPXXPXSPPXPXXPSSPPDXXXHSSX*PLLTPXXPPAXRLXXXRXXTPXQXXXSPP 775
AP PP P P+ P + + P PP P PP
Sbjct: 418 ----APPTIKPPPPPAPPTVEPPPPPPPAPPTVEPPPPPPPAPTKVEPPPPPAPAEVEPP 473
Query: 776 XP 781
P
Sbjct: 474 PP 475
Score = 29.5 bits (63), Expect = 8.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 747 PLPXXTXPPPXRXPAYPXXLXSPXPPSPP 833
P P PPP PA P P PP+PP
Sbjct: 350 PAPPKVNPPPPPRPASPK--VEPPPPAPP 376
>AY069072-1|AAL39217.1| 319|Drosophila melanogaster GH09066p
protein.
Length = 319
Score = 29.9 bits (64), Expect = 6.2
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 156 EEPHLTDTIDVIDSSTARCPTDLVLRSREMCRV-GDADVQCVRLHC 290
E+ L D + + + CP L + E+C++ DA ++CV L C
Sbjct: 242 EKQELLDRVSRLWKTMRECPAVEKLATDELCKICMDAPIECVFLEC 287
>AY058770-1|AAL13999.1| 699|Drosophila melanogaster SD05126p
protein.
Length = 699
Score = 29.9 bits (64), Expect = 6.2
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 156 EEPHLTDTIDVIDSSTARCPTDLVLRSREMCRV-GDADVQCVRLHC 290
E+ L D + + + CP L + E+C++ DA ++CV L C
Sbjct: 622 EKQELLDRVSRLWKTMRECPAVEKLATDELCKICMDAPIECVFLEC 667
>AE013599-1613|AAF58440.1| 700|Drosophila melanogaster CG17019-PA
protein.
Length = 700
Score = 29.9 bits (64), Expect = 6.2
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 156 EEPHLTDTIDVIDSSTARCPTDLVLRSREMCRV-GDADVQCVRLHC 290
E+ L D + + + CP L + E+C++ DA ++CV L C
Sbjct: 623 EKQELLDRVSRLWKTMRECPAVEKLATDELCKICMDAPIECVFLEC 668
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,829,258
Number of Sequences: 53049
Number of extensions: 561596
Number of successful extensions: 3465
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3212
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5494635426
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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