Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_G17
         (897 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC113467-1|AAI13468.1| 1121|Homo sapiens WD repeat domain 6 prot...    33   1.9  
BC101707-1|AAI01708.1| 1121|Homo sapiens WD repeat domain 6 prot...    33   1.9  
AF099100-1|AAF80244.1| 1121|Homo sapiens WD-repeat protein 6 pro...    33   1.9  
Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    31   7.5  
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    31   7.5  

>BC113467-1|AAI13468.1| 1121|Homo sapiens WD repeat domain 6
           protein.
          Length = 1121

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +3

Query: 633 GKLPRALSCSDPCRLPDTCPPFSLREAWRFLIXHAVXISXRCXSXXPXWAVCTNPPXXPD 812
           G + + + C+D C L   C    + +AW+ L   A  +S +     P  A+  N P  PD
Sbjct: 146 GCILQEVPCTDRCTLSSAC---LIGDAWKELTIVAGAVSNQLLVWYPATALADNKPVAPD 202

Query: 813 R 815
           R
Sbjct: 203 R 203


>BC101707-1|AAI01708.1| 1121|Homo sapiens WD repeat domain 6 protein
           protein.
          Length = 1121

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +3

Query: 633 GKLPRALSCSDPCRLPDTCPPFSLREAWRFLIXHAVXISXRCXSXXPXWAVCTNPPXXPD 812
           G + + + C+D C L   C    + +AW+ L   A  +S +     P  A+  N P  PD
Sbjct: 146 GCILQEVPCTDRCTLSSAC---LIGDAWKELTIVAGAVSNQLLVWYPATALADNKPVAPD 202

Query: 813 R 815
           R
Sbjct: 203 R 203


>AF099100-1|AAF80244.1| 1121|Homo sapiens WD-repeat protein 6
           protein.
          Length = 1121

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +3

Query: 633 GKLPRALSCSDPCRLPDTCPPFSLREAWRFLIXHAVXISXRCXSXXPXWAVCTNPPXXPD 812
           G + + + C+D C L   C    + +AW+ L   A  +S +     P  A+  N P  PD
Sbjct: 146 GCILQEVPCTDRCTLSSAC---LIGDAWKELTIVAGAVSNQLLVWYPATALADNKPVAPD 202

Query: 813 R 815
           R
Sbjct: 203 R 203


>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
 Frame = -1

Query: 720 SATLPEGRKA--DRYPVSGRGRNRRAHEGAFQGETPGIFIVLSGFATSDLSVDFCDARQG 547
           S+TL + R    +R    G G  + +      G++P    +  GFA+ +   +F +A  G
Sbjct: 561 SSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDG 620

Query: 546 GGAYGKTPATRPFYGSWP 493
           G +   +P + P Y S P
Sbjct: 621 GSSVPPSPYSTPSYLSVP 638


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
 Frame = -1

Query: 720 SATLPEGRKA--DRYPVSGRGRNRRAHEGAFQGETPGIFIVLSGFATSDLSVDFCDARQG 547
           S+TL + R    +R    G G  + +      G++P    +  GFA+ +   +F +A  G
Sbjct: 562 SSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDG 621

Query: 546 GGAYGKTPATRPFYGSWP 493
           G +   +P + P Y S P
Sbjct: 622 GSSVPPSPYSTPSYLSVP 639


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,511,716
Number of Sequences: 237096
Number of extensions: 2368842
Number of successful extensions: 11460
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11460
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)