Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_G16
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1044 + 8231933-8231941,8232091-8232166,8232423-8232871           30   2.9  
12_01_0841 - 7873458-7874225                                           29   6.6  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.6  
12_02_0299 - 17051570-17052474,17053542-17053755                       28   8.7  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.7  

>01_01_1044 + 8231933-8231941,8232091-8232166,8232423-8232871
          Length = 177

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/41 (36%), Positives = 16/41 (39%)
 Frame = +2

Query: 629 PPXXSPXALSCXXPCRLPDTCPPFSLPEAWXLSHXXRCXYP 751
           PP   P  L C  PC LP  CPP   P  +         YP
Sbjct: 132 PPCPPPCPLPCPPPCPLP--CPPPCPPRGYGYGCYYEERYP 170


>12_01_0841 - 7873458-7874225
          Length = 255

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 21/70 (30%), Positives = 25/70 (35%)
 Frame = -2

Query: 831 G*GXAXGXXGGLGXXGQXWXEGXXXEXGYXQRXX*ESXHASGREKGGQVSGKRQGXXQES 652
           G G   G   G G  G  + +G     G  Q     S + SG  +GG  SG   G     
Sbjct: 51  GSGYGEGYGQGGGASGGGYGQGGGGGGGGGQGGGSGSGYGSGYGQGGGASGGGYGKGGGG 110

Query: 651 AXGEXXGGNA 622
             G   GG A
Sbjct: 111 GGGGGQGGGA 120


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +3

Query: 354 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 509
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 22/70 (31%), Positives = 25/70 (35%)
 Frame = +2

Query: 623 AFPPXXSPXALSCXXPCRLPDTCPPFSLPEAWXLSHXXRCXYPXSXXXPSLQXXPXXPNP 802
           AFP    P   S   P   P    PF  P+   L H      P     PS    P  P P
Sbjct: 274 AFPFPHLPPIFSPPSPPPPPPPAFPFPFPQLPPLPHFP----PLPSFYPSPPPPPPPPPP 329

Query: 803 PFXPXAXPYP 832
           P  P + P+P
Sbjct: 330 P--PPSFPWP 337


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 303 NESAN---ARGEAVCVLGALPLPRSLTRCAR 386
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,559,378
Number of Sequences: 37544
Number of extensions: 372313
Number of successful extensions: 966
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)