Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_G16
         (895 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D89501-1|BAA13971.1|  134|Homo sapiens PBI protein.                    33   1.8  
DQ535362-1|ABF83305.1|  129|Homo sapiens circulating B cell anti...    30   9.9  

>D89501-1|BAA13971.1|  134|Homo sapiens PBI protein.
          Length = 134

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 23/67 (34%), Positives = 25/67 (37%)
 Frame = +2

Query: 626 FPPXXSPXALSCXXPCRLPDTCPPFSLPEAWXLSHXXRCXYPXSXXXPSLQXXPXXPNPP 805
           FPP  SP       P R+P + PP   P     SH     Y      P  Q  P  P PP
Sbjct: 63  FPPPLSPP----YGPGRIPPSPPPPYGPGR-IQSHSLPPPYGPGYPQPPSQPRPYPPGPP 117

Query: 806 FXPXAXP 826
           F P   P
Sbjct: 118 FFPVNSP 124


>DQ535362-1|ABF83305.1|  129|Homo sapiens circulating B cell
           antibody heavy chain variable region protein.
          Length = 129

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
 Frame = -3

Query: 683 PVSGRVGNRRAXEG----SXQGETPGIFIVLSGXATSDLSVDFCDARQGXGAYGKTPATR 516
           P SG  G+ +  +G    +    T   ++ LSG  + D +V FC AR G G  G   A R
Sbjct: 55  PYSGNTGSAQKFQGRVTMTRDTSTSTAYMELSGLTSDDSAVYFC-ARGGGG--GIAVAGR 111

Query: 515 PFYG 504
            +YG
Sbjct: 112 SYYG 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,148,586
Number of Sequences: 237096
Number of extensions: 1982328
Number of successful extensions: 5333
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5333
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)