Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_G15
         (882 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z70686-10|CAD21656.1|  533|Caenorhabditis elegans Hypothetical p...    29   5.8  
Z70683-8|CAD21626.1|  533|Caenorhabditis elegans Hypothetical pr...    29   5.8  

>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
           protein T01D3.7 protein.
          Length = 2882

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +1

Query: 556 TCSIRSLSSIFCQHGS*KXNGL-RXDDGW 639
           TCS+ S     C HG    NGL + +DGW
Sbjct: 853 TCSVTSCIDSQCTHGHCGTNGLCKCEDGW 881


>Z70686-10|CAD21656.1|  533|Caenorhabditis elegans Hypothetical
           protein F13B12.6 protein.
          Length = 533

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = -1

Query: 495 IXLVHVDSGVACCFVETFKIFGIIEQLEQRDGFFPHFFV-KDRE-FQILGKESDLVHHHE 322
           + L H  +G     V   +I+G       RDG F HF V K +E +Q LG  ++ V H E
Sbjct: 407 VLLTHKPTGSFLVRVSE-RIWGYTVSYASRDGSFKHFLVEKIKEGYQFLG--TNQVVHDE 463

Query: 321 IF--VGFH 304
           +F  V +H
Sbjct: 464 LFDLVAYH 471


>Z70683-8|CAD21626.1|  533|Caenorhabditis elegans Hypothetical
           protein F13B12.6 protein.
          Length = 533

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = -1

Query: 495 IXLVHVDSGVACCFVETFKIFGIIEQLEQRDGFFPHFFV-KDRE-FQILGKESDLVHHHE 322
           + L H  +G     V   +I+G       RDG F HF V K +E +Q LG  ++ V H E
Sbjct: 407 VLLTHKPTGSFLVRVSE-RIWGYTVSYASRDGSFKHFLVEKIKEGYQFLG--TNQVVHDE 463

Query: 321 IF--VGFH 304
           +F  V +H
Sbjct: 464 LFDLVAYH 471


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,233,383
Number of Sequences: 27780
Number of extensions: 277691
Number of successful extensions: 709
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)