Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_G11
(870 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0005 + 11568545-11569119,11569179-11569191 33 0.39
07_03_1136 + 24218601-24218734,24218769-24219906 31 1.2
09_04_0080 + 14393797-14393894,14395100-14395202,14395307-143954... 31 1.6
09_02_0468 - 9608922-9610061 31 1.6
02_01_0381 - 2764331-2764342,2768966-2769907 31 1.6
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 29 6.4
09_04_0368 + 17005231-17005437,17005707-17005963,17006061-170061... 29 6.4
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 29 6.4
12_01_0252 + 1868670-1869200,1870167-1871120 28 8.5
11_06_0369 - 22760383-22760440,22761410-22761497,22761582-227616... 28 8.5
11_01_0252 + 1934505-1935032,1936001-1936957 28 8.5
10_06_0170 + 11431540-11432259,11434552-11434644,11434739-114348... 28 8.5
04_04_0009 + 22134160-22134696 28 8.5
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060 28 8.5
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 32.7 bits (71), Expect = 0.39
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -3
Query: 469 PPPPPXXXXXGGGGGGXFFXKXCXPPXXXXGGRXXKEG 356
PPPP GGGGGG PP GG G
Sbjct: 70 PPPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTG 107
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -3
Query: 466 PPPPXXXXXGGGGGGXFFXKXCXPPXXXXGG 374
PP P GGGGGG + C P GG
Sbjct: 346 PPTPDLGGGGGGGGGGTKVRVCAPKDISGGG 376
>09_04_0080 +
14393797-14393894,14395100-14395202,14395307-14395427,
14396208-14396287,14396702-14396878,14396992-14397215,
14397881-14397887,14398807-14398888,14399188-14399384
Length = 362
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3
Query: 469 PPPPPXXXXXGGGGGG 422
PPPPP GGGGGG
Sbjct: 344 PPPPPAGDEGGGGGGG 359
>09_02_0468 - 9608922-9610061
Length = 379
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3
Query: 469 PPPPPXXXXXGGGGGG 422
PPPPP GGGGGG
Sbjct: 348 PPPPPATTSNGGGGGG 363
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 469 PPPPPXXXXXGGGGGG 422
PPPPP GGGGG
Sbjct: 347 PPPPPPATTSNGGGGG 362
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3
Query: 469 PPPPPXXXXXGGGGGG 422
PPPPP GGGGGG
Sbjct: 66 PPPPPNQPSAGGGGGG 81
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 469 PPPPPXXXXXGGGGGG 422
PPPPP GGGGG
Sbjct: 65 PPPPPPNQPSAGGGGG 80
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 490 FFFFXXXPPPPPXXXXXGGGGGGXF 416
FF PPPPP GGGG F
Sbjct: 74 FFAAVPPPPPPPFEYYPAVGGGGGF 98
>09_04_0368 +
17005231-17005437,17005707-17005963,17006061-17006115,
17006196-17006276,17006357-17006453,17006560-17006627,
17006788-17006886,17007008-17007049,17007124-17007263,
17007882-17008018,17008275-17008444
Length = 450
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 481 FXXXPPPPPXXXXXGGGGGG 422
F PPPPP GGGGG
Sbjct: 14 FPWPPPPPPGSSSGRGGGGG 33
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = -3
Query: 469 PPPP--PXXXXXGGGGGGXFF 413
PPPP P GGGGGG F+
Sbjct: 12 PPPPQHPPPPQAGGGGGGEFY 32
>12_01_0252 + 1868670-1869200,1870167-1871120
Length = 494
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 469 PPPPPXXXXXGGGGGG 422
PPPPP GGGGG
Sbjct: 66 PPPPPLNWPTAGGGGG 81
>11_06_0369 -
22760383-22760440,22761410-22761497,22761582-22761649,
22761742-22761858,22761964-22762084,22762172-22762247,
22762336-22762435,22762524-22762615,22763514-22763664,
22764698-22764792,22764900-22765193
Length = 419
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 469 PPPPPXXXXXGGGGG 425
PPPPP GGGGG
Sbjct: 53 PPPPPLMAALGGGGG 67
>11_01_0252 + 1934505-1935032,1936001-1936957
Length = 494
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 469 PPPPPXXXXXGGGGGG 422
PPPPP GGGGG
Sbjct: 65 PPPPPLNWPMAGGGGG 80
>10_06_0170 +
11431540-11432259,11434552-11434644,11434739-11434806,
11434873-11435011,11435179-11435229,11435600-11435675,
11436216-11436274
Length = 401
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 469 PPPPPXXXXXGGGGGG 422
PPPPP G GGGG
Sbjct: 3 PPPPPPLSAAGAGGGG 18
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 469 PPPPPXXXXXGGGGGG 422
PPPPP GGGGG
Sbjct: 4 PPPPPLSAAGAGGGGG 19
>04_04_0009 + 22134160-22134696
Length = 178
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 469 PPPPPXXXXXGGGGGG 422
PPPPP GGGGG
Sbjct: 65 PPPPPSSSGKSGGGGG 80
>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
Length = 794
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 469 PPPPPXXXXXGGGGGG 422
PPPPP GGGG G
Sbjct: 12 PPPPPPPFGRGGGGAG 27
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,191,868
Number of Sequences: 37544
Number of extensions: 358440
Number of successful extensions: 1434
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1175
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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