Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_G11
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    35   0.066
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    35   0.066
AF016446-1|AAC24166.1|   66|Caenorhabditis elegans Hypothetical ...    31   1.4  
U64609-7|AAB04604.3|  373|Caenorhabditis elegans Sperm-specific ...    29   5.7  
U40802-12|AAK19014.2|  265|Caenorhabditis elegans Sperm-specific...    29   5.7  
U55366-2|AAA97981.1|  156|Caenorhabditis elegans Hypothetical pr...    28   7.5  

>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 35.1 bits (77), Expect = 0.066
 Identities = 15/32 (46%), Positives = 15/32 (46%)
 Frame = -3

Query: 469 PPPPPXXXXXGGGGGGXFFXKXCXPPXXXXGG 374
           PPP P     GGGGGG      C PP    GG
Sbjct: 50  PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGG 81


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 35.1 bits (77), Expect = 0.066
 Identities = 15/32 (46%), Positives = 15/32 (46%)
 Frame = -3

Query: 469 PPPPPXXXXXGGGGGGXFFXKXCXPPXXXXGG 374
           PPP P     GGGGGG      C PP    GG
Sbjct: 50  PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGG 81


>AF016446-1|AAC24166.1|   66|Caenorhabditis elegans Hypothetical
           protein C02E7.7 protein.
          Length = 66

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -3

Query: 469 PPPPPXXXXXGGGGGG 422
           PPPPP     GGGGGG
Sbjct: 31  PPPPPPACGCGGGGGG 46


>U64609-7|AAB04604.3|  373|Caenorhabditis elegans Sperm-specific
           family, class qprotein 4 protein.
          Length = 373

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 481 FXXXPPPPPXXXXXGGGGGG 422
           F   PPPP      GGGGGG
Sbjct: 277 FGGAPPPPSGSAMGGGGGGG 296


>U40802-12|AAK19014.2|  265|Caenorhabditis elegans Sperm-specific
           family, class qprotein 3 protein.
          Length = 265

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 481 FXXXPPPPPXXXXXGGGGGG 422
           F   PPPP      GGGGGG
Sbjct: 171 FGGAPPPPSGSAMGGGGGGG 190


>U55366-2|AAA97981.1|  156|Caenorhabditis elegans Hypothetical
           protein F41F3.3 protein.
          Length = 156

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -3

Query: 469 PPPPPXXXXXGGGGG 425
           PPPPP     GGGGG
Sbjct: 32  PPPPPSPCGCGGGGG 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,115,777
Number of Sequences: 27780
Number of extensions: 188180
Number of successful extensions: 552
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)