Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_G10
         (886 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024762-2|AAF59474.3|  384|Caenorhabditis elegans Vacuolar h at...   212   2e-55
AB009567-1|BAA75067.1|  384|Caenorhabditis elegans Vha11 protein...   212   2e-55
AC024762-3|AAO91689.2|  133|Caenorhabditis elegans Vacuolar h at...   117   1e-26
AL117195-7|CAB55028.1|  158|Caenorhabditis elegans Hypothetical ...    32   0.47 
U00048-11|AAB53833.1|  995|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z79601-3|CAB01883.2|  640|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z81575-7|CAB04638.1|  367|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>AC024762-2|AAF59474.3|  384|Caenorhabditis elegans Vacuolar h
           atpase protein 11, isoforma protein.
          Length = 384

 Score =  212 bits (518), Expect = 2e-55
 Identities = 102/179 (56%), Positives = 127/179 (70%)
 Frame = +2

Query: 179 EYWVISAPGDKTCQQTWDTLNNATKSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGKLDT 358
           EYW+IS PG+K     WD LN +T  GN S N K+ IPDLKVGTLDQLVGLSDDL KLDT
Sbjct: 8   EYWLISVPGEKGANDAWDKLNRST--GNTSTNSKYLIPDLKVGTLDQLVGLSDDLSKLDT 65

Query: 359 FVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDXAKYPIKQSLRNIAD 538
             E V RK+ QY  EVLE+ + K+ ENL+  N D+ TY+T+FQW+ AKYP+KQSL+ +++
Sbjct: 66  SAEAVIRKLVQYFTEVLEEDKSKIAENLVIGNKDMKTYVTKFQWEGAKYPLKQSLKVLSE 125

Query: 539 IISKXVGQIDXDLKVKSSXYNALXGNLHNLXXTQXGSLLTXNLADLXXKEPFILDSEYL 715
           II K + QID DLKVKS  YN L   L ++     GSLLT +LADL   + F+L+SEYL
Sbjct: 126 IIGKQISQIDNDLKVKSLTYNNLKNALASMDRKTVGSLLTKDLADLVKADDFVLNSEYL 184


>AB009567-1|BAA75067.1|  384|Caenorhabditis elegans Vha11 protein
           protein.
          Length = 384

 Score =  212 bits (518), Expect = 2e-55
 Identities = 102/179 (56%), Positives = 127/179 (70%)
 Frame = +2

Query: 179 EYWVISAPGDKTCQQTWDTLNNATKSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGKLDT 358
           EYW+IS PG+K     WD LN +T  GN S N K+ IPDLKVGTLDQLVGLSDDL KLDT
Sbjct: 8   EYWLISVPGEKGANDAWDKLNRST--GNTSTNSKYLIPDLKVGTLDQLVGLSDDLSKLDT 65

Query: 359 FVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDXAKYPIKQSLRNIAD 538
             E V RK+ QY  EVLE+ + K+ ENL+  N D+ TY+T+FQW+ AKYP+KQSL+ +++
Sbjct: 66  SAEAVIRKLVQYFTEVLEEDKSKIAENLVIGNKDMKTYVTKFQWEGAKYPLKQSLKVLSE 125

Query: 539 IISKXVGQIDXDLKVKSSXYNALXGNLHNLXXTQXGSLLTXNLADLXXKEPFILDSEYL 715
           II K + QID DLKVKS  YN L   L ++     GSLLT +LADL   + F+L+SEYL
Sbjct: 126 IIGKQISQIDNDLKVKSLTYNNLKNALASMDRKTVGSLLTKDLADLVKADDFVLNSEYL 184


>AC024762-3|AAO91689.2|  133|Caenorhabditis elegans Vacuolar h
           atpase protein 11, isoformb protein.
          Length = 133

 Score =  117 bits (282), Expect = 1e-26
 Identities = 56/92 (60%), Positives = 65/92 (70%)
 Frame = +2

Query: 179 EYWVISAPGDKTCQQTWDTLNNATKSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGKLDT 358
           EYW+IS PG+K     WD LN +T  GN S N K+ IPDLKVGTLDQLVGLSDDL KLDT
Sbjct: 8   EYWLISVPGEKGANDAWDKLNRST--GNTSTNSKYLIPDLKVGTLDQLVGLSDDLSKLDT 65

Query: 359 FVEGVTRKVAQYLGEVLEDQRDKLHENLMANN 454
             E V RK+ QY  EVLE+ + K+ ENL+  N
Sbjct: 66  SAEAVIRKLVQYFTEVLEEDKSKIAENLVIGN 97


>AL117195-7|CAB55028.1|  158|Caenorhabditis elegans Hypothetical
           protein Y57A10A.9 protein.
          Length = 158

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -1

Query: 142 VYNKLSETANNFGETTRQFGTSPSTPMKIQRQNLKEFPIV 23
           ++  L + A NF +TT+Q  TSPS+    +  +    P+V
Sbjct: 119 IFADLQKEAENFSKTTKQSSTSPSSSSSSEESSASSSPVV 158


>U00048-11|AAB53833.1|  995|Caenorhabditis elegans Hypothetical
           protein C05D11.1 protein.
          Length = 995

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -1

Query: 607 ESVVXGGLDLQIRVDLSDXFAYDVGDIPQTLLYGVLSXVPLEASQISG*VTVIGHQVFM 431
           E+V+ GG+ L +    +      +G++P  +++G +S V  EA    G    + H VFM
Sbjct: 11  ETVLNGGIKLFLYSSKNTKLRVAIGEVPGPMVHGAVSFV-TEADSDDGLPHTLEHLVFM 68


>Z79601-3|CAB01883.2|  640|Caenorhabditis elegans Hypothetical
           protein K09A9.1 protein.
          Length = 640

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -1

Query: 211 LVARGTDHPVFSHFHHKNLKINAVYNKLSETANNFGETTRQFGTSPST 68
           L+  G  +P+  H+H     ++ V  KL   AN+    T   GT P +
Sbjct: 579 LLLPGDIYPISEHYHPSQQPVDKVVYKLLSDANSLAFPTVMKGTVPKS 626


>Z81575-7|CAB04638.1|  367|Caenorhabditis elegans Hypothetical
           protein R08H2.8 protein.
          Length = 367

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 302 VGTLDQLVGLSDDLGKLDTFVEGVTR 379
           VG  D + GL    GKL+ F+ GVT+
Sbjct: 161 VGQYDYITGLEGSSGKLNVFMGGVTK 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,942,762
Number of Sequences: 27780
Number of extensions: 308628
Number of successful extensions: 767
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)