Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_G04
(892 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical... 32 0.63
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 31 1.5
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 31 1.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 1.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 1.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 1.9
Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical p... 30 2.6
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.6
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 3.4
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 3.4
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 3.4
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 5.9
>AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical
protein F35F10.12 protein.
Length = 471
Score = 31.9 bits (69), Expect = 0.63
Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +3
Query: 198 DPDPFFAQPT-VGNGYEPIDNRPYIVNPPKDYN--PNGNGYEPIDNGAYYVDPPQGRPYF 368
DP+ +QPT +G G P P V PP Y P +G DNGA P G PY
Sbjct: 345 DPNLPPSQPTPIGGGVAPAGVAPAGVVPPPGYGFLPMTDG---TDNGAGDTPYPVGPPYP 401
Query: 369 KPTPFPGARG 398
P P G
Sbjct: 402 SDVPAPYPSG 411
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1
Query: 802 RPRPGXXXSXXGPPPAXPPPXXXPPAP 882
RPRP + PPP PPP PPAP
Sbjct: 233 RPRP---TTRRLPPPTTPPPPPPPPAP 256
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1
Query: 802 RPRPGXXXSXXGPPPAXPPPXXXPPAP 882
RPRP + PPP PPP PPAP
Sbjct: 231 RPRP---TTRRLPPPTTPPPPPPPPAP 254
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 805 PRPGXXXSXXGPPPAXPPPXXXPPAP 882
P G GPPP PPP PP P
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 805 PRPGXXXSXXGPPPAXPPPXXXPP 876
P PG G PP PPP PP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPP 753
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 805 PRPGXXXSXXGPPPAXPPPXXXPPAP 882
P G GPPP PPP PP P
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 805 PRPGXXXSXXGPPPAXPPPXXXPP 876
P PG G PP PPP PP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPP 753
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 805 PRPGXXXSXXGPPPAXPPPXXXPPAP 882
P G GPPP PPP PP P
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 805 PRPGXXXSXXGPPPAXPPPXXXPP 876
P PG G PP PPP PP
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPP 336
>Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 177 ADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 317
+ SV+ P QP VGN Y+P P +PP Y GY P
Sbjct: 80 SQSVLFEQPQ---IQPLVGNSYDP----PVRFDPPYAYRATATGYMP 119
>Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical
protein M04G12.4b protein.
Length = 550
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 177 ADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 317
+ SV+ P QP VGN Y+P P +PP Y GY P
Sbjct: 51 SQSVLFEQPQ---IQPLVGNSYDP----PVRFDPPYAYRATATGYMP 90
>Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 177 ADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 317
+ SV+ P QP VGN Y+P P +PP Y GY P
Sbjct: 80 SQSVLFEQPQ---IQPLVGNSYDP----PVRFDPPYAYRATATGYMP 119
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 787 PALXXRPRPGXXXSXXGPPPAXPPPXXXPPAP 882
P L P P PPP PPP PP P
Sbjct: 41 PPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 6/59 (10%)
Frame = +1
Query: 724 LPTXXXFLSCFXFXGR----CGXXFPALXXR--PRPGXXXSXXGPPPAXPPPXXXPPAP 882
+PT F F F G G P++ P P G P A PPP PPAP
Sbjct: 111 MPTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAP 169
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 6/59 (10%)
Frame = +1
Query: 724 LPTXXXFLSCFXFXGR----CGXXFPALXXR--PRPGXXXSXXGPPPAXPPPXXXPPAP 882
+PT F F F G G P++ P P G P A PPP PPAP
Sbjct: 111 MPTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAP 169
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 775 GXXFPALXXRPRPGXXXSXXGPPPAXPPPXXXPPAP 882
G P P PG GPPP PPP PP P
Sbjct: 73 GQPMPHHMGMPPPGM-----GPPPFMPPPIGMPPPP 103
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 775 GXXFPALXXRPRPGXXXSXXGPPPAXPPPXXXPPAP 882
G P P PG GPPP PPP PP P
Sbjct: 96 GQPMPHHMGMPPPGM-----GPPPFMPPPIGMPPPP 126
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 775 GXXFPALXXRPRPGXXXSXXGPPPAXPPPXXXPPAP 882
G P P PG GPPP PPP PP P
Sbjct: 346 GQPMPHHMGMPPPGM-----GPPPFMPPPIGMPPPP 376
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 838 PPPAXPPPXXXPPAPXLR 891
PPP PPP PP P L+
Sbjct: 135 PPPPSPPPPPPPPPPQLQ 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,285,883
Number of Sequences: 27780
Number of extensions: 373771
Number of successful extensions: 2251
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1998
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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