Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_G03
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0513 - 16681227-16683936,16685572-16685966                       29   3.7  
04_04_1432 - 33558895-33559023,33559215-33559286,33559405-335594...    29   4.9  

>04_03_0513 - 16681227-16683936,16685572-16685966
          Length = 1034

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +1

Query: 274  QQGLLHKHESLRKFHDDVQGRIPSQEFGILDLL 372
            Q G+LH+ ESL    +D+ G IP QE   LD L
Sbjct: 905  QLGMLHQLESLDLSSNDLSGEIP-QELASLDFL 936


>04_04_1432 -
           33558895-33559023,33559215-33559286,33559405-33559494,
           33559574-33559618,33559693-33559788,33559905-33559956,
           33560044-33560132,33560226-33560342,33560448-33560534,
           33560646-33560761,33560854-33560878,33561816-33562121
          Length = 407

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/75 (24%), Positives = 30/75 (40%)
 Frame = +2

Query: 416 YYAKDFECFYKTACYARVYMNQGMFLYAYYXAIIQRSDTASFVLPAPYEAYPQYFVNXEV 595
           Y  +D  C+YK        +N G+ L  +  AII+R     F      E + +  +   +
Sbjct: 165 YTRRDNLCWYKLPTVGMSAINDGVLLKCHVQAIIKRYFKEKFYFLDLMELWNEIGLQTAM 224

Query: 596 KNKMDYVTMMXGCLD 640
              +D +T   G  D
Sbjct: 225 GQMLDLITTHTGAKD 239


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,093,330
Number of Sequences: 37544
Number of extensions: 323512
Number of successful extensions: 678
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)