Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_F20
         (853 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical pr...    41   0.001
X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP translo...    41   0.001
Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical pr...    40   0.002
U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical pr...    40   0.002
AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical ...    34   0.11 
U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical pr...    31   0.79 
Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical pr...    31   1.0  
AL117200-5|CAB55057.1|  293|Caenorhabditis elegans Hypothetical ...    28   7.3  
AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical ...    28   7.3  
U53340-4|AAA96209.2|  445|Caenorhabditis elegans Hypothetical pr...    28   9.7  

>Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical
           protein T27E9.1a protein.
          Length = 300

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/25 (72%), Positives = 20/25 (80%)
 Frame = +2

Query: 74  AFSNVLRGTGGAFVLVLYDEIKKVL 148
           A SNV RGTGGA VL +YDEI+K L
Sbjct: 276 ALSNVFRGTGGALVLAIYDEIQKFL 300


>X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP
           translocase protein.
          Length = 300

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/25 (72%), Positives = 20/25 (80%)
 Frame = +2

Query: 74  AFSNVLRGTGGAFVLVLYDEIKKVL 148
           A SNV RGTGGA VL +YDEI+K L
Sbjct: 276 ALSNVFRGTGGALVLAIYDEIQKFL 300


>Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical
           protein K01H12.2 protein.
          Length = 313

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +2

Query: 74  AFSNVLRGTGGAFVLVLYDEIKKVL 148
           A SNV RGTGGA VL +YDEI+K +
Sbjct: 289 ALSNVFRGTGGALVLAIYDEIQKFI 313


>U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical
           protein T01B11.4 protein.
          Length = 313

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +2

Query: 74  AFSNVLRGTGGAFVLVLYDEIKKVL 148
           A SNV RGTGGA VL +YDEI+K +
Sbjct: 289 ALSNVFRGTGGALVLAIYDEIQKFI 313


>AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical
           protein W02D3.6 protein.
          Length = 300

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +2

Query: 80  SNVLRGTGGAFVLVLYDEIKKVL 148
           SNV R TGGA VL +YDEI+ ++
Sbjct: 278 SNVFRATGGALVLTIYDEIQHLI 300


>U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical
           protein F25B4.7 protein.
          Length = 306

 Score = 31.5 bits (68), Expect = 0.79
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 74  AFSNVLRGTGGAFVLVLYDEIKKVL 148
           A  N +RGTG A VL +Y+E++K +
Sbjct: 282 ALVNAIRGTGAALVLAIYNELQKYM 306


>Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical
           protein C47E12.2 protein.
          Length = 306

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +2

Query: 74  AFSNVLRGTGGAFVLVLYDEIKK 142
           A +N+ R  GGA V+ LY+EI K
Sbjct: 282 ALANIFRSAGGALVMALYEEIHK 304


>AL117200-5|CAB55057.1|  293|Caenorhabditis elegans Hypothetical
           protein Y50E8A.9 protein.
          Length = 293

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 266 LTKNKLXKVVFVSNNT*FEGSGCDTESHRNYGNNSYVR 153
           + K  L   VF+ + T FE +G     +R YG + YVR
Sbjct: 239 ILKLLLISSVFLIDFTFFENNGQQNNMYRGYGGSHYVR 276


>AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical
           protein C07H6.3 protein.
          Length = 1378

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 227 NNT*FEGSGCDTESHRNYGNNSYVR 153
           NN+ F+ S  D+  HR+Y NNS  R
Sbjct: 788 NNSPFKPSNLDSSVHRSYNNNSPFR 812


>U53340-4|AAA96209.2|  445|Caenorhabditis elegans Hypothetical
           protein F02E8.2a protein.
          Length = 445

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 354 FENFLILTSQLLSYYIIYC*FKMKND*FFLC 446
           FE+ + +T  L  ++IIYC F++     FLC
Sbjct: 249 FESAITITFVLPLFFIIYCYFRILGTRHFLC 279


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,163,218
Number of Sequences: 27780
Number of extensions: 189914
Number of successful extensions: 307
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)